##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935136.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 402609 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.955997009505502 33.0 31.0 34.0 30.0 34.0 2 32.27561480245102 34.0 31.0 34.0 30.0 34.0 3 32.33106562446443 34.0 31.0 34.0 30.0 34.0 4 35.85619794887844 37.0 35.0 37.0 35.0 37.0 5 30.336924907292186 37.0 35.0 37.0 0.0 37.0 6 32.82875941670454 37.0 35.0 37.0 17.0 37.0 7 34.995837152174936 37.0 35.0 37.0 32.0 37.0 8 35.544036521786644 37.0 35.0 37.0 33.0 37.0 9 37.33482112918489 39.0 37.0 39.0 34.0 39.0 10 37.38182703317611 39.0 37.0 39.0 34.0 39.0 11 37.24906050287003 39.0 37.0 39.0 34.0 39.0 12 36.967236201873284 39.0 35.0 39.0 33.0 39.0 13 36.76399186307311 39.0 35.0 39.0 33.0 39.0 14 37.87532320439931 40.0 36.0 41.0 33.0 41.0 15 38.04576152048265 40.0 36.0 41.0 33.0 41.0 16 38.14435842219126 40.0 36.0 41.0 34.0 41.0 17 38.14837720965006 40.0 36.0 41.0 34.0 41.0 18 38.07323979344724 40.0 36.0 41.0 34.0 41.0 19 38.02455732484867 40.0 36.0 41.0 34.0 41.0 20 37.962241281243095 40.0 36.0 41.0 34.0 41.0 21 37.903524262994615 40.0 35.0 41.0 34.0 41.0 22 37.848490719283475 40.0 35.0 41.0 34.0 41.0 23 37.77869595562941 39.0 35.0 41.0 33.0 41.0 24 37.75850018255926 39.0 35.0 41.0 33.0 41.0 25 37.710701946553606 39.0 35.0 41.0 33.0 41.0 26 37.633935157932385 39.0 35.0 41.0 33.0 41.0 27 37.58014848152923 39.0 35.0 41.0 33.0 41.0 28 37.55988564587478 39.0 35.0 41.0 33.0 41.0 29 37.54390984801631 39.0 35.0 41.0 33.0 41.0 30 37.3756349212263 39.0 35.0 41.0 33.0 41.0 31 32.80948264941917 38.0 33.0 40.0 9.0 41.0 32 33.671994416418904 38.0 33.0 40.0 16.0 41.0 33 35.53876838322044 38.0 34.0 40.0 28.0 41.0 34 36.36684227128554 38.0 35.0 40.0 31.0 41.0 35 36.52796385575086 39.0 35.0 40.0 31.0 41.0 36 36.627472311845985 39.0 35.0 40.0 31.0 41.0 37 36.632901897374374 39.0 35.0 40.0 31.0 41.0 38 36.633691745589395 39.0 35.0 41.0 31.0 41.0 39 36.66944355441632 39.0 35.0 41.0 31.0 41.0 40 36.57785593466614 39.0 35.0 41.0 31.0 41.0 41 36.573857017602684 39.0 35.0 41.0 31.0 41.0 42 36.49351852541796 39.0 35.0 41.0 31.0 41.0 43 36.43036544140841 39.0 35.0 41.0 31.0 41.0 44 36.37018049770373 38.0 35.0 40.0 31.0 41.0 45 36.37940781254269 38.0 35.0 40.0 31.0 41.0 46 36.340076848754 38.0 35.0 40.0 31.0 41.0 47 36.23738912940347 38.0 35.0 40.0 31.0 41.0 48 36.23322379777898 38.0 35.0 40.0 31.0 41.0 49 36.204836454227305 38.0 35.0 40.0 31.0 41.0 50 36.00072278563072 38.0 35.0 40.0 31.0 41.0 51 35.42757116706283 37.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 2.0 11 7.0 12 6.0 13 10.0 14 14.0 15 12.0 16 32.0 17 55.0 18 107.0 19 212.0 20 402.0 21 643.0 22 1025.0 23 1574.0 24 2112.0 25 2510.0 26 2792.0 27 3286.0 28 3868.0 29 4875.0 30 6605.0 31 9446.0 32 15295.0 33 16357.0 34 31422.0 35 48028.0 36 44235.0 37 44455.0 38 67621.0 39 95512.0 40 87.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.41834881982271 22.890447059057298 24.292800210626194 11.398403910493805 2 30.77576507231582 25.54662215698109 24.869538435554098 18.80807433514899 3 30.883313587127958 26.388133399899154 25.777118742998788 16.951434269974094 4 28.889071034179565 26.57118941702744 25.4065358697893 19.1332036790037 5 21.07379616451694 39.610639603188204 20.328159579145026 18.98740465314983 6 25.115682957907055 34.16540613846188 24.222508687088464 16.496402216542602 7 75.33438149668785 8.479442834114488 9.985867181309906 6.200308487887752 8 75.15977039758177 7.4039576859931095 10.084722398158014 7.351549518267103 9 68.14179514119158 9.60510073048541 12.974623021343287 9.278481106979724 10 40.24872767374798 23.823362120568593 19.586993832726044 16.340916372957384 11 33.28787980397855 24.312918985914372 23.826839439754202 18.572361770352874 12 29.625765941645614 22.899885496846817 28.412678305750738 19.061670255756827 13 22.82065229540323 29.02269944288379 29.512007928287744 18.644640333425233 14 17.84460854079268 33.229262137706804 27.516275095688375 21.40985422581214 15 17.005332717351077 27.175746195440244 35.85488650278558 19.9640345844231 16 18.534359639252973 28.74203010861655 32.266541483175985 20.457068768954496 17 19.91261993646441 26.372733843505735 25.47856605291983 28.23608016711002 18 20.45061089046693 27.731123745370816 30.134199682570433 21.684065681591818 19 21.671895064442175 29.413897851265126 27.100238693124094 21.813968391168604 20 23.76896691330795 29.232083733845986 26.555541480692185 20.443407872153877 21 22.041981177768008 28.60840169991232 28.526187939166785 20.823429183152886 22 20.494325760228907 26.7068048652663 27.680205857295785 25.118663517209004 23 19.37959658129848 28.251231343561617 27.693369994212745 24.675802080927152 24 21.36762963570114 26.34864098914828 29.174707967283393 23.109021407867186 25 19.07781495197574 29.612601804728655 26.805660082114407 24.503923161181195 26 17.150634983321286 30.820473461845115 28.482721449346638 23.54617010548696 27 20.20744692741593 30.66846493744551 28.02545397643868 21.09863415869988 28 16.80787066359669 29.361241303597286 29.88780678027565 23.94308125253037 29 18.075353506752208 27.185929773055246 31.357470896080315 23.381245824112227 30 19.613818866443623 30.913864319972976 27.467841007031634 22.004475806551767 31 25.028998358208582 29.550506819271305 23.212844223551883 22.20765059896823 32 24.522303276876574 27.763413137808644 25.994202812157702 21.720080773157083 33 23.822368600801276 29.16477276961022 24.188480635057836 22.82437799453067 34 22.156484330951372 26.01009912843478 27.55750616603206 24.27591037458179 35 22.4294538870219 26.483511297561652 27.288510689030797 23.79852412638565 36 25.894602455484105 28.00806738051062 25.963900459254514 20.133429704750764 37 22.95303880439831 27.401523562563177 29.0261767620694 20.619260870969104 38 22.260803906519726 29.26611178587662 24.913004925374246 23.56007938222941 39 25.222486332893702 26.47605989930677 27.344892935826078 20.95656083197345 40 25.025521039022973 25.075942167214343 29.064924032994792 20.833612760767892 41 22.16840656815918 25.827539871190165 25.9097536319357 26.09429992871496 42 24.32732502254048 24.25504645946812 26.914202116693865 24.50342640129754 43 24.337260220213654 23.36634302760246 28.125302713054108 24.171094039129777 44 21.11204667555867 24.685985658542158 27.76987101629621 26.432096649602965 45 20.96128005086821 25.302961434046434 27.4531865904637 26.282571924621656 46 24.78782143469222 25.27886857968898 27.8888450084325 22.0444649771863 47 21.979389432426995 24.30621272748498 31.521898417571393 22.192499422516633 48 22.58643001025809 22.46174327945972 30.062169499439907 24.88965721084228 49 23.43961511044214 21.39221924994225 31.025386913854387 24.14277872576122 50 21.397683608662497 22.34798526610185 31.228561706270845 25.0257694189648 51 20.407144400646782 22.19026400304017 27.58085388056402 29.821737715749023 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1086.0 1 1083.0 2 1080.0 3 1121.0 4 1162.0 5 999.5 6 837.0 7 863.0 8 889.0 9 941.5 10 994.0 11 1110.5 12 1227.0 13 1276.0 14 1325.0 15 1396.0 16 1467.0 17 1506.5 18 1546.0 19 1567.0 20 1588.0 21 1743.5 22 1899.0 23 2180.0 24 2461.0 25 2295.5 26 2659.5 27 3189.0 28 4103.0 29 5017.0 30 4939.0 31 4861.0 32 5618.0 33 6375.0 34 7572.0 35 8769.0 36 9475.5 37 10182.0 38 11392.0 39 12602.0 40 14586.0 41 16570.0 42 19733.0 43 22896.0 44 27658.5 45 32421.0 46 36683.5 47 40946.0 48 45440.0 49 49934.0 50 48624.5 51 47315.0 52 38522.0 53 29729.0 54 25058.5 55 20388.0 56 17887.0 57 15386.0 58 14558.0 59 13730.0 60 12962.5 61 12195.0 62 11201.5 63 10208.0 64 8751.0 65 7294.0 66 5952.5 67 4611.0 68 3951.0 69 3291.0 70 2748.5 71 2206.0 72 1521.5 73 837.0 74 812.5 75 777.0 76 766.0 77 454.0 78 142.0 79 119.5 80 97.0 81 79.5 82 62.0 83 53.0 84 44.0 85 27.0 86 10.0 87 32.0 88 54.0 89 28.5 90 3.0 91 1.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 402609.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.29600030673847 #Duplication Level Percentage of deduplicated Percentage of total 1 70.6966625675002 22.125227733978726 2 12.193076327178447 7.6318904095092455 3 5.579038042859524 5.238047289019118 4 3.068348562726628 3.8410815024109235 5 1.716490733508907 2.685964726120425 6 1.1103196798951502 2.084913902554583 7 0.7672927147910258 1.6809235126220696 8 0.4734154158215188 1.185280719901198 9 0.33301968017094713 0.9379965611501919 >10 2.8453495489634797 21.36540251682048 >50 1.1125103342281824 23.554052441509853 >100 0.09713039601845465 5.0925471702448855 >500 0.00489733089168679 0.9678802782934325 >1k 0.002448665445843395 1.6087912358648822 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTCTTCTGC 2216 0.5504099510939895 No Hit CTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTCTTCTGCT 2188 0.5434553127227657 Illumina Single End Adapter 2 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTCTTCTGC 1894 0.470431609824917 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 794 0.1972136738125576 No Hit TCTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTCTTCTGC 740 0.18380115695376906 No Hit ACTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTCTTCTGC 649 0.16119858224729203 No Hit TGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTCTTCTGCTT 569 0.14132818690093862 Illumina Single End Adapter 2 (95% over 22bp) GCCTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTCTTCTG 520 0.12915756975129716 No Hit AAAACTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTCTTC 517 0.12841242992580892 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCC 500 0.12418997091470882 No Hit GCAATTGGGAGAAACAAGCGAGATAGGAATGTCTTACACGCGGGGCAAGAC 468 0.11624181277616744 No Hit GTGGCATGCCTGTGTATGTGTGTAACAGGATTCTGAATGTTAGGTTGTAAT 460 0.11425477324153212 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 457 0.11350963341604386 No Hit CGCTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTCTTCTG 440 0.10928717440494376 No Hit TTTTTAGGGTACCAAAGCATATTTAATTGATGATACAATAAAAGTAAAAGA 423 0.10506471539384364 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.572764145858637 0.0 2 0.0 0.0 0.0 2.012374288701942 0.0 3 0.0 0.0 0.0 2.8186155798802313 0.0 4 0.0 0.0 0.0 3.674781239366234 0.0 5 0.0 0.0 0.0 5.978505199834082 0.0 6 0.0 0.0 0.0 7.449162835406064 0.0 7 0.0 0.0 0.0 8.637164097176168 0.0 8 0.0 0.0 0.0 10.576017923096602 0.0 9 0.0 0.0 0.0 11.290358635798007 0.0 10 0.0 0.0 0.0 12.750584313813153 0.0 11 0.0 0.0 0.0 15.04238603707319 0.0 12 0.0 0.0 0.0 16.69659644965711 0.0 13 0.0 0.0 0.0 17.418388560613398 0.0 14 0.0 0.0 0.0 17.72464102888907 0.0 15 0.0 0.0 0.0 18.300137354107832 0.0 16 0.0 0.0 0.0 19.369909763567133 0.0 17 0.0 0.0 0.0 20.585977958763962 0.0 18 0.0 0.0 0.0 22.095879625144992 0.0 19 0.0 0.0 0.0 22.946829305852578 0.0 20 0.0 0.0 0.0 23.669118176692525 0.0 21 0.0 0.0 0.0 24.525035456236697 0.0 22 0.0 0.0 0.0 25.284829698292885 0.0 23 0.0 0.0 0.0 26.003144490063562 0.0 24 0.0 0.0 0.0 26.572431316736587 0.0 25 0.0 0.0 0.0 27.0791263980686 0.0 26 0.0 0.0 0.0 27.583834439865974 0.0 27 0.0 0.0 0.0 28.053272529923575 0.0 28 0.0 0.0 0.0 28.55400649265168 0.0 29 0.0 0.0 0.0 29.105658343454817 0.0 30 0.0 0.0 0.0 29.690344726521264 0.0 31 0.0 0.0 0.0 30.24274171714989 0.0 32 0.0 0.0 0.0 30.798367647022296 0.0 33 0.0 0.0 0.0 31.30804328765626 0.0 34 0.0 0.0 0.0 31.83411200445097 0.0 35 0.0 0.0 0.0 32.377815697115565 0.0 36 0.0 0.0 0.0 32.9294675479187 0.0 37 0.0 0.0 0.0 33.497264094940746 0.0 38 0.0 0.0 0.0 34.01265247423679 0.0 39 0.0 0.0 0.0 34.599325896837875 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAAAAGT 25 3.8862745E-5 45.000004 13 CGGCCTT 25 3.8862745E-5 45.000004 40 CCAATAC 25 3.8862745E-5 45.000004 24 TACGGTG 25 3.8862745E-5 45.000004 40 CGACATA 25 3.8862745E-5 45.000004 21 CATTAGC 25 3.8862745E-5 45.000004 13 AAAGTCC 25 3.8862745E-5 45.000004 25 TAGCAAC 25 3.8862745E-5 45.000004 21 AATGCTC 25 3.8862745E-5 45.000004 24 CTACGGT 25 3.8862745E-5 45.000004 28 TACTCAC 65 0.0 45.000004 30 GTTCAAT 25 3.8862745E-5 45.000004 39 TACTACG 25 3.8862745E-5 45.000004 26 ACCGTTT 25 3.8862745E-5 45.000004 29 CGGTCGT 25 3.8862745E-5 45.000004 31 GAACCGC 25 3.8862745E-5 45.000004 28 GATCTAG 25 3.8862745E-5 45.000004 9 AACAGCC 25 3.8862745E-5 45.000004 32 GTAACGT 25 3.8862745E-5 45.000004 31 TACACGG 25 3.8862745E-5 45.000004 2 >>END_MODULE