##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935135.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 441541 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.99390770053064 33.0 31.0 34.0 30.0 34.0 2 32.323747964515185 34.0 31.0 34.0 30.0 34.0 3 32.35563175333661 34.0 31.0 34.0 30.0 34.0 4 35.88762764952745 37.0 35.0 37.0 35.0 37.0 5 30.356177569013976 37.0 35.0 37.0 0.0 37.0 6 32.84242459930108 37.0 35.0 37.0 17.0 37.0 7 35.035047707913876 37.0 35.0 37.0 32.0 37.0 8 35.62260129863365 37.0 35.0 37.0 35.0 37.0 9 37.402143855270516 39.0 37.0 39.0 35.0 39.0 10 37.4176124074548 39.0 37.0 39.0 35.0 39.0 11 37.326255092958526 39.0 37.0 39.0 35.0 39.0 12 37.15001777864343 39.0 37.0 39.0 34.0 39.0 13 37.081317476746214 39.0 37.0 39.0 33.0 39.0 14 38.2476644298038 40.0 37.0 41.0 34.0 41.0 15 38.396939355575135 40.0 38.0 41.0 34.0 41.0 16 38.473093098942115 40.0 38.0 41.0 34.0 41.0 17 38.46229455475256 40.0 38.0 41.0 34.0 41.0 18 38.42374547324031 40.0 37.0 41.0 34.0 41.0 19 38.373960742037546 40.0 37.0 41.0 34.0 41.0 20 38.305758695115514 40.0 37.0 41.0 34.0 41.0 21 38.23629968677881 40.0 37.0 41.0 34.0 41.0 22 38.21908724218136 40.0 37.0 41.0 34.0 41.0 23 38.15034390917265 40.0 36.0 41.0 34.0 41.0 24 38.14050337341266 40.0 36.0 41.0 34.0 41.0 25 38.09012753062569 40.0 36.0 41.0 34.0 41.0 26 38.00260224984769 40.0 36.0 41.0 34.0 41.0 27 37.972007129575736 40.0 36.0 41.0 34.0 41.0 28 37.92168111228629 40.0 36.0 41.0 34.0 41.0 29 37.91614142288032 40.0 36.0 41.0 34.0 41.0 30 37.80932461538113 40.0 36.0 41.0 33.0 41.0 31 33.18736198903386 39.0 33.0 41.0 9.0 41.0 32 34.078434392276144 39.0 33.0 41.0 16.0 41.0 33 36.042211255579886 39.0 34.0 41.0 30.0 41.0 34 36.91254039828691 39.0 35.0 41.0 32.0 41.0 35 37.04124871755964 39.0 35.0 41.0 32.0 41.0 36 37.18691129476085 39.0 35.0 41.0 33.0 41.0 37 37.24997905064309 40.0 35.0 41.0 33.0 41.0 38 37.22417623731432 40.0 35.0 41.0 33.0 41.0 39 37.23884078715227 40.0 35.0 41.0 33.0 41.0 40 37.201374277813386 40.0 35.0 41.0 33.0 41.0 41 37.1117676501163 40.0 35.0 41.0 32.0 41.0 42 37.01705617371886 40.0 35.0 41.0 32.0 41.0 43 36.98174801434068 39.0 35.0 41.0 32.0 41.0 44 36.91172733675921 39.0 35.0 41.0 32.0 41.0 45 36.914379412104424 39.0 35.0 41.0 32.0 41.0 46 36.893921515782225 39.0 35.0 41.0 32.0 41.0 47 36.80503056341314 39.0 35.0 41.0 32.0 41.0 48 36.80164695917254 39.0 35.0 41.0 32.0 41.0 49 36.766984266466764 39.0 35.0 41.0 32.0 41.0 50 36.57475070265276 39.0 35.0 41.0 31.0 41.0 51 35.98153512357856 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 4.0 11 4.0 12 5.0 13 6.0 14 10.0 15 25.0 16 37.0 17 60.0 18 117.0 19 223.0 20 357.0 21 657.0 22 991.0 23 1524.0 24 2214.0 25 2506.0 26 2917.0 27 3276.0 28 3866.0 29 4735.0 30 6171.0 31 8616.0 32 13942.0 33 15257.0 34 27550.0 35 43160.0 36 49750.0 37 48562.0 38 73470.0 39 131398.0 40 129.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.30860101326944 23.409830570660482 24.58956246418792 11.692005951882157 2 31.961244822111652 26.296765192813353 24.71842931913458 17.023560665940423 3 30.544841815369356 25.442484389898105 26.812232612599963 17.200441182132575 4 29.37326318507228 26.76127471741016 25.80553108318367 18.05993101433389 5 22.761872623380388 40.54096901533492 19.60225664207854 17.094901719206142 6 26.30922156719308 33.22839781583137 23.836291533515574 16.626089083459973 7 77.31354506150052 8.141939253659343 8.873015189982357 5.671500494857782 8 77.66390890087217 6.538237672152756 9.624021325312938 6.173832101662134 9 71.04821522803093 10.127032370719819 11.569707003426636 7.2550453978226255 10 37.399244917233055 32.742372735487756 17.508453348613155 12.349928998666035 11 27.900919733388292 25.696367947710407 27.804439451828934 18.598272867072367 12 26.42246133428153 23.796657615034615 30.875048976199267 18.90583207448459 13 22.97023379482313 27.804439451828934 31.273879435884776 17.951447317463156 14 16.88155799801151 33.11470508967457 29.439848168120285 20.56388874419363 15 15.894333708534427 30.179756806276202 35.53826258490152 18.387646900287855 16 17.921552018951807 29.64888877816556 32.330632942354164 20.09892626052847 17 17.024240104542955 28.345046099909183 28.4281640889521 26.20254970659576 18 19.47542810293948 29.030826129396818 30.390609252594892 21.103136515068815 19 20.59808715385434 30.05632546014979 28.54434808998485 20.801239296011016 20 23.463732699794583 29.25164367521929 28.23860071884604 19.046022906140088 21 21.244686223929374 29.09786407151318 30.075802700089007 19.58164700446844 22 20.156678541743574 27.023990977055355 27.67670499455317 25.1426254866479 23 18.557280071386348 28.279367034997883 29.023352304768977 24.14000058884679 24 20.583818943201198 27.482838513297747 29.68716381944146 22.2461787240596 25 18.699735698383616 29.958259821851197 28.150726659585406 23.191277820179778 26 17.993346031285885 31.45959265390983 29.150180843908043 21.39688047089625 27 20.375457771758455 30.049078115056133 29.655003725588337 19.920460387597075 28 18.353222011092967 28.641734289680915 30.798498893647476 22.206544805578645 29 18.585137054090104 25.55730951372579 32.54737385656145 23.31017957562265 30 19.37962725998265 26.626972353643264 32.16145273032402 21.831947656050062 31 23.586484607318457 28.954276046845028 26.72277319660009 20.736466149236424 32 20.484847386765896 28.23814775977769 28.45081204236979 22.826192811086628 33 21.289076212628046 27.517036922958454 28.77241298090098 22.421473883512515 34 19.412013833369947 25.9110705461101 31.910513406456026 22.766402214063927 35 19.546542676671024 24.661582956056176 30.20738730944578 25.584487057827022 36 23.50676381128819 24.956459309554493 31.254855155013917 20.281921724143398 37 21.928427937609417 26.15227125000849 31.402972770365604 20.516328042016482 38 20.58268654553031 25.576107315062472 27.866494844193408 25.974711295213808 39 22.091493202216782 24.585032873504385 30.662837652675517 22.660636271603316 40 21.39076552347347 23.353663646184614 33.13214401380619 22.123426816535723 41 19.386648125542134 23.960175838710335 30.902679479368842 25.750496556378682 42 22.784747056332254 24.607680826922078 29.109188048222023 23.49838406852365 43 23.83493265631051 23.547303647905856 30.150087987299028 22.467675708484602 44 21.387368330460816 24.382333690416065 29.327061360100192 24.903236619022923 45 20.10300289214365 24.047143979834264 29.551502578469496 26.29835054955259 46 21.579649454977 23.063996321972365 32.675561272905576 22.680792950145058 47 19.69035718087335 23.704933403692976 33.85597260503555 22.74873681039813 48 19.93993762753629 22.528372223644013 31.703058153149993 25.82863199566971 49 20.946412677418405 21.13688196566117 33.72665279102054 24.190052565899883 50 20.137880740406892 22.37821629248473 31.957847629098996 25.526055338009378 51 18.5695099662319 22.72971252952727 29.79247680283371 28.908300701407118 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1188.0 1 1197.0 2 1206.0 3 1276.0 4 1346.0 5 1154.5 6 963.0 7 986.0 8 1009.0 9 1109.0 10 1209.0 11 1343.5 12 1478.0 13 1518.0 14 1558.0 15 1640.5 16 1723.0 17 1839.0 18 1955.0 19 1823.5 20 1692.0 21 1701.0 22 1710.0 23 2013.5 24 2317.0 25 3601.0 26 5254.0 27 5623.0 28 5749.5 29 5876.0 30 7277.5 31 8679.0 32 9436.0 33 10193.0 34 11136.5 35 12080.0 36 12345.5 37 12611.0 38 14474.0 39 16337.0 40 19526.0 41 22715.0 42 26460.0 43 30205.0 44 32920.5 45 35636.0 46 40435.5 47 45235.0 48 50045.5 49 54856.0 50 51253.5 51 47651.0 52 38945.0 53 30239.0 54 25255.5 55 20272.0 56 17220.0 57 14168.0 58 12855.5 59 11543.0 60 11751.0 61 11959.0 62 10433.0 63 8907.0 64 7364.5 65 5822.0 66 4492.0 67 3162.0 68 2292.0 69 1422.0 70 1190.0 71 958.0 72 690.5 73 423.0 74 373.5 75 213.5 76 103.0 77 162.5 78 222.0 79 140.5 80 59.0 81 38.0 82 17.0 83 11.0 84 5.0 85 2.5 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 441541.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.572604416524857 #Duplication Level Percentage of deduplicated Percentage of total 1 70.90536674479532 21.677617284972442 2 12.120059307881153 7.410835574493412 3 5.430670652006513 4.980892366806787 4 2.858674284569357 3.4958847223132463 5 1.714540096902278 2.6208978069431774 6 1.121021868034955 2.0563534868223843 7 0.6938811900728243 1.4849628595314768 8 0.49894131502339656 1.2203148361016811 9 0.3794975260868175 1.0442004967891887 >10 3.0398709817280394 23.134260660543294 >50 1.1290495614453038 23.23082050246862 >100 0.10135517983746987 5.059995593929352 >500 0.00471419441104511 1.0122393274539894 >1k 0.002357097205522555 1.5707244808309533 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCCGTCTTCTGCT 2488 0.5634810810321125 No Hit CCTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCCGTCTTCTGC 2182 0.49417834357398294 No Hit GCTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCCGTCTTCTGC 1869 0.4232902493766151 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 963 0.218099791412349 No Hit ACTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCCGTCTTCTGC 744 0.16850077342760922 No Hit TCTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCCGTCTTCTGC 724 0.16397118274407133 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCC 712 0.16125342833394862 No Hit TGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCCGTCTTCTGCTT 541 0.12252542798969972 Illumina Single End Adapter 1 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCCGTCTTCTG 530 0.12003415311375389 No Hit AAAACTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCCGTCTTC 461 0.10440706525554819 No Hit ACCTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCCGTCTTCTG 447 0.10123635177707166 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.5861290344498019 0.0 2 0.0 0.0 0.0 1.9024280870859105 0.0 3 0.0 0.0 0.0 2.6887650297480867 0.0 4 0.0 0.0 0.0 3.5240215517924725 0.0 5 0.0 0.0 0.0 5.507755791647888 0.0 6 0.0 0.0 0.0 6.792347709499231 0.0 7 0.0 0.0 0.0 7.820564794662331 0.0 8 0.0 0.0 0.0 9.47590370996125 0.0 9 0.0 0.0 0.0 10.10506385590466 0.0 10 0.0 0.0 0.0 11.386938019345882 0.0 11 0.0 0.0 0.0 13.493197687190998 0.0 12 0.0 0.0 0.0 15.12203849699122 0.0 13 0.0 0.0 0.0 15.799212304180132 0.0 14 0.0 0.0 0.0 16.081858762832898 0.0 15 0.0 0.0 0.0 16.570601597586634 0.0 16 0.0 0.0 0.0 17.565752670759906 0.0 17 0.0 0.0 0.0 18.80074557062651 0.0 18 0.0 0.0 0.0 20.223037045257406 0.0 19 0.0 0.0 0.0 21.09679508811186 0.0 20 0.0 0.0 0.0 21.838968521609544 0.0 21 0.0 0.0 0.0 22.659503873932433 0.0 22 0.0 0.0 0.0 23.544585893495736 0.0 23 0.0 0.0 0.0 24.290609479074423 0.0 24 0.0 0.0 0.0 24.92248737942796 0.0 25 0.0 0.0 0.0 25.44882581685506 0.0 26 0.0 0.0 0.0 25.96723747058597 0.0 27 0.0 0.0 0.0 26.40774016456003 0.0 28 0.0 0.0 0.0 26.893538765369467 0.0 29 0.0 0.0 0.0 27.44026036087249 0.0 30 0.0 0.0 0.0 28.05356693942352 0.0 31 0.0 0.0 0.0 28.593947107969587 0.0 32 0.0 0.0 0.0 29.187097007978874 0.0 33 0.0 0.0 0.0 29.73449804208443 0.0 34 0.0 0.0 0.0 30.269895660878603 0.0 35 0.0 0.0 0.0 30.86531035622966 0.0 36 0.0 0.0 0.0 31.472501987357912 0.0 37 0.0 0.0 0.0 32.04436281115457 0.0 38 0.0 0.0 0.0 32.62505633678413 0.0 39 0.0 0.0 0.0 33.20439098520862 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGAAA 30 2.1624528E-6 45.000004 10 GGTCGAA 30 2.1624528E-6 45.000004 9 CGAAAGG 55 1.8189894E-12 45.000004 2 ACGCATC 55 1.8189894E-12 45.000004 29 CGGCCGG 65 0.0 45.000004 21 GGCGTAA 30 2.1624528E-6 45.000004 32 GGTCCTT 30 2.1624528E-6 45.000004 9 TACGGGT 45 3.8380676E-10 45.000004 4 CGCGAGG 35 1.2096461E-7 45.000004 2 GTGGCGT 70 0.0 45.000004 34 TCGGCGT 60 0.0 45.000004 4 TAGCACG 45 3.8380676E-10 45.000004 1 CTAACGG 70 0.0 45.000004 2 GGGACGT 35 1.2096461E-7 45.000004 7 TCTACGG 30 2.1624528E-6 45.000004 2 GCCCTAC 30 2.1624528E-6 45.000004 26 ACGTGCG 35 1.2096461E-7 45.000004 1 GGAACGT 55 1.8189894E-12 45.000004 8 GCGATCA 30 2.1624528E-6 45.000004 9 ACGTCGT 45 3.8380676E-10 45.000004 31 >>END_MODULE