##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935133.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1040626 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.05031778948441 33.0 31.0 34.0 30.0 34.0 2 32.36624877717835 34.0 31.0 34.0 30.0 34.0 3 32.422284278885975 34.0 31.0 34.0 30.0 34.0 4 35.930253520477095 37.0 35.0 37.0 35.0 37.0 5 30.418939176995387 37.0 35.0 37.0 0.0 37.0 6 32.89937114775145 37.0 35.0 37.0 17.0 37.0 7 35.09007078431636 37.0 35.0 37.0 32.0 37.0 8 35.62565417354554 37.0 35.0 37.0 35.0 37.0 9 37.486876168767644 39.0 37.0 39.0 35.0 39.0 10 37.427000670750104 39.0 37.0 39.0 35.0 39.0 11 37.31910119485771 39.0 37.0 39.0 34.0 39.0 12 37.22429768235658 39.0 37.0 39.0 34.0 39.0 13 37.20544941218075 39.0 37.0 39.0 34.0 39.0 14 38.42571875006006 40.0 38.0 41.0 34.0 41.0 15 38.533244412497865 40.0 38.0 41.0 34.0 41.0 16 38.607087464660694 40.0 38.0 41.0 35.0 41.0 17 38.59409048015329 40.0 38.0 41.0 35.0 41.0 18 38.55738661152037 40.0 38.0 41.0 35.0 41.0 19 38.54765785210056 40.0 38.0 41.0 34.0 41.0 20 38.477398219917625 40.0 38.0 41.0 34.0 41.0 21 38.44630924078391 40.0 38.0 41.0 34.0 41.0 22 38.42330481844582 40.0 37.0 41.0 34.0 41.0 23 38.359013709055894 40.0 37.0 41.0 34.0 41.0 24 38.35148362620192 40.0 37.0 41.0 34.0 41.0 25 38.290327168454375 40.0 37.0 41.0 34.0 41.0 26 38.19695933024929 40.0 37.0 41.0 34.0 41.0 27 38.158564171950346 40.0 37.0 41.0 34.0 41.0 28 38.074016985929624 40.0 37.0 41.0 34.0 41.0 29 38.059294117194845 40.0 37.0 41.0 34.0 41.0 30 37.944981194012065 40.0 37.0 41.0 34.0 41.0 31 33.350089273187486 39.0 34.0 41.0 9.0 41.0 32 34.23166920680437 39.0 33.0 41.0 16.0 41.0 33 36.19237555087034 39.0 34.0 41.0 30.0 41.0 34 37.08219571680892 39.0 35.0 41.0 32.0 41.0 35 37.23395725265369 39.0 35.0 41.0 32.0 41.0 36 37.40417402601896 39.0 36.0 41.0 33.0 41.0 37 37.487813104804225 40.0 36.0 41.0 33.0 41.0 38 37.419783860868364 40.0 36.0 41.0 33.0 41.0 39 37.47768266408873 40.0 36.0 41.0 33.0 41.0 40 37.45989048899413 40.0 36.0 41.0 33.0 41.0 41 37.4285218704895 40.0 36.0 41.0 33.0 41.0 42 37.360288903025676 40.0 36.0 41.0 33.0 41.0 43 37.34701612298751 40.0 35.0 41.0 33.0 41.0 44 37.271656675885474 40.0 35.0 41.0 32.0 41.0 45 37.232761818367024 39.0 35.0 41.0 32.0 41.0 46 37.18587081237639 39.0 35.0 41.0 32.0 41.0 47 37.094003993749915 39.0 35.0 41.0 32.0 41.0 48 37.09243762888877 39.0 35.0 41.0 32.0 41.0 49 37.05459406165135 39.0 35.0 41.0 32.0 41.0 50 36.87565369306552 39.0 35.0 41.0 32.0 41.0 51 36.26872382585098 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 4.0 10 8.0 11 9.0 12 10.0 13 9.0 14 25.0 15 29.0 16 42.0 17 100.0 18 172.0 19 340.0 20 593.0 21 958.0 22 1477.0 23 2358.0 24 3395.0 25 4538.0 26 5581.0 27 6791.0 28 8400.0 29 10711.0 30 14274.0 31 19598.0 32 30311.0 33 35765.0 34 63247.0 35 96387.0 36 118548.0 37 119882.0 38 180872.0 39 315841.0 40 350.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.633472544410765 22.224891555659767 24.288937620240127 10.85269827968934 2 32.56760834343943 24.281538227951252 24.57559199943111 18.575261429178205 3 32.70829289293176 24.500733212508624 24.914522604662963 17.876451289896657 4 28.844080390072897 26.17289977379001 25.33907474923748 19.643945086899617 5 22.459269708809888 39.57560160903149 20.34746393036499 17.617664751793633 6 26.725836179376643 34.118309555978804 22.981743681207274 16.174110583437276 7 79.88047579053378 6.569122816458554 8.377073031040931 5.173328361966739 8 79.69597146333072 6.36366956043766 8.170851006990024 5.769507969241591 9 73.92838541416417 8.293757795788306 10.514632538491254 7.263224251556275 10 36.592108980555935 33.383271223282904 17.033881529002734 12.990738267158422 11 26.87334354513533 25.835218416606924 28.490351000263303 18.80108703799444 12 26.746977300201998 23.421863378389546 30.757063536755762 19.0740957846527 13 23.10810992614061 25.347435101563864 31.663537140144488 19.88091783215103 14 18.697976025968984 30.09822933503487 29.994253458975656 21.209541180020487 15 17.573076206052896 29.027431565230927 33.7578534459066 19.64163878280958 16 20.058407151080214 28.156417387226533 31.367080968570843 20.41809449312241 17 19.614059229732874 27.41618987032805 28.639011518067008 24.330739381872064 18 19.965770603463685 28.330735538031917 30.43985062837177 21.26364323013263 19 21.6277509883474 27.83315043060619 28.92576199326175 21.61333658778466 20 23.282428076945994 28.341690482459597 29.321004856692028 19.054876583902384 21 22.97492086494091 27.83478406266997 29.094890959864543 20.095404112524577 22 20.653145318298794 26.138785692458192 29.500416095696245 23.70765289354677 23 20.48603436777478 27.826423710343583 29.211839796430226 22.47570212545141 24 21.543570889061005 26.41554218326277 29.42132908460869 22.61955784306754 25 20.63853872572855 29.29121509552904 26.898424602114495 23.171821576627917 26 20.55128355432211 30.88054690157655 27.44588353548729 21.122286008614047 27 23.409755281916848 28.07387092000392 28.341210002440835 20.175163795638397 28 19.191813389248395 28.91432656881531 30.184235258392544 21.709624783543752 29 21.385396866885895 28.276729583923522 27.78375708467788 22.55411646451271 30 23.274836492649616 28.407612341033182 27.248021863762773 21.069529302554425 31 25.550582053494725 29.762373801923076 24.43798252205884 20.249061622523364 32 23.118103910530778 30.861904276848744 25.489080611093705 20.530911201526774 33 22.231522179918624 30.80914757078912 25.385969599068254 21.573360650224 34 22.609756050684876 27.400430125712795 27.72590729041942 22.26390653318291 35 22.528843215526038 28.24636324673802 26.476370953637524 22.748422584098417 36 23.513923349983568 28.378495251896457 26.481367945832606 21.626213452287374 37 22.67769592533725 28.99725742005293 28.128645642142324 20.196401012467497 38 19.69401110485419 30.650204780583994 26.978280381232068 22.677503733329747 39 23.156734504038916 27.880621856459477 26.572082573374107 22.390561066127503 40 23.743784990957366 26.827025271327066 28.40665138099567 21.022538356719895 41 20.853601582124607 27.856309567510323 26.892851033896903 24.397237816468163 42 22.67000824503712 26.5780405256067 27.532466034867475 23.2194851944887 43 23.39783937745165 25.88451566653149 28.0304355263082 22.68720942970866 44 21.897876854893113 26.429380007802994 27.930687874414055 23.74205526288984 45 21.646681901086463 26.68855092992103 26.781571861552568 24.883195307439944 46 23.157118888053922 27.034688735434248 27.051217248079524 22.75697512843231 47 20.989769619440608 26.14061151652947 29.97762885032663 22.89199001370329 48 20.40310351653716 24.743663909992637 29.984547762596748 24.868684810873454 49 21.301985535629512 25.422101696478848 30.25717212524 23.018740642651633 50 20.67966781533423 24.3812858798454 29.628608164700864 25.31043814011951 51 20.020449229598338 25.00677476826449 27.05169772809828 27.921078274038898 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 990.0 1 1295.0 2 1600.0 3 1936.5 4 2273.0 5 1910.5 6 1548.0 7 1472.0 8 1396.0 9 1504.5 10 1613.0 11 1750.0 12 1887.0 13 2044.0 14 2201.0 15 2347.0 16 2493.0 17 2812.0 18 3131.0 19 3355.5 20 3580.0 21 3691.5 22 3803.0 23 5405.0 24 7007.0 25 7730.0 26 9892.0 27 11331.0 28 13316.0 29 15301.0 30 18651.0 31 22001.0 32 23532.0 33 25063.0 34 28606.5 35 32150.0 36 33998.0 37 35846.0 38 39009.5 39 42173.0 40 46752.0 41 51331.0 42 58180.0 43 65029.0 44 70815.0 45 76601.0 46 86221.0 47 95841.0 48 105565.5 49 115290.0 50 111186.5 51 107083.0 52 91344.5 53 75606.0 54 64328.5 55 53051.0 56 47224.0 57 41397.0 58 38826.0 59 36255.0 60 34116.0 61 31977.0 62 28987.5 63 25998.0 64 20646.5 65 15295.0 66 11875.5 67 8456.0 68 7153.5 69 5851.0 70 4671.0 71 3491.0 72 3160.0 73 2829.0 74 2260.5 75 1238.0 76 784.0 77 684.0 78 584.0 79 406.5 80 229.0 81 129.5 82 30.0 83 52.5 84 75.0 85 42.0 86 9.0 87 5.0 88 1.0 89 0.5 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1040626.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.731745599276792 #Duplication Level Percentage of deduplicated Percentage of total 1 67.34379535780566 16.655296144790068 2 13.636536566297252 6.745107064257983 3 5.907063882517665 4.382760035433094 4 3.128355365833704 3.0947875620772662 5 1.7546447284734101 2.169771352085824 6 1.1186717421339318 1.6600022961333698 7 0.7657235596834626 1.3256376194224826 8 0.5011170008042217 0.9914798543490075 9 0.40875370353273416 0.9098273347680409 >10 3.4137839013215263 20.64165861409959 >50 1.8118162814669856 31.318751321300187 >100 0.19953923796669615 7.194065795168041 >500 0.007538148989852965 1.2292421264944904 >1k 0.002660523172889282 1.6816128796205296 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCTGCT 4597 0.44175332924605 TruSeq Adapter, Index 15 (95% over 23bp) GCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCTGC 3781 0.3633389901847542 TruSeq Adapter, Index 14 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCTGC 3387 0.3254771647066285 TruSeq Adapter, Index 14 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCTGC 1285 0.12348336482079056 TruSeq Adapter, Index 14 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCC 1187 0.11406595645313494 No Hit ACTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCTGC 1097 0.10541731611549202 TruSeq Adapter, Index 15 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.4701016503527684 0.0 2 0.0 0.0 0.0 1.4511457526527303 0.0 3 0.0 0.0 0.0 2.029835887244793 0.0 4 0.0 0.0 0.0 2.6907842010482153 0.0 5 0.0 0.0 0.0 4.33162346510658 0.0 6 0.0 0.0 0.0 5.34159246453577 0.0 7 0.0 0.0 0.0 6.20395800220252 0.0 8 0.0 0.0 0.0 7.619163849452157 0.0 9 0.0 0.0 0.0 8.13366185353816 0.0 10 0.0 0.0 0.0 9.235306440546363 0.0 11 0.0 0.0 0.0 10.991941389125392 0.0 12 0.0 0.0 0.0 12.419543620858983 0.0 13 0.0 0.0 0.0 12.989200731098396 0.0 14 0.0 0.0 0.0 13.246257541133895 0.0 15 0.0 0.0 0.0 13.710881719272823 0.0 16 0.0 0.0 0.0 14.621391354819119 0.0 17 0.0 0.0 0.0 15.693534468675585 0.0 18 0.0 0.0 0.0 16.814878736452865 0.0 19 0.0 0.0 0.0 17.525220396184604 0.0 20 0.0 0.0 0.0 18.21422874308349 0.0 21 0.0 0.0 0.0 18.93783165133295 0.0 22 0.0 0.0 0.0 19.72207113794966 0.0 23 0.0 0.0 0.0 20.40800441272849 0.0 24 0.0 0.0 0.0 20.984772627245523 0.0 25 0.0 0.0 0.0 21.500423783376544 0.0 26 0.0 0.0 0.0 21.953612537069034 0.0 27 3.8438401500635194E-4 0.0 0.0 22.4207352113055 0.0 28 3.8438401500635194E-4 0.0 0.0 22.90525126222101 0.0 29 3.8438401500635194E-4 0.0 0.0 23.43310661082848 0.0 30 3.8438401500635194E-4 0.0 0.0 24.008241193281737 0.0 31 3.8438401500635194E-4 0.0 0.0 24.53436681382168 0.0 32 3.8438401500635194E-4 0.0 0.0 25.097297203798483 0.0 33 3.8438401500635194E-4 0.0 0.0 25.626978376477236 0.0 34 3.8438401500635194E-4 0.0 0.0 26.15906194924978 0.0 35 4.8048001875793995E-4 0.0 0.0 26.72429864331662 0.0 36 4.8048001875793995E-4 0.0 0.0 27.310868650216314 0.0 37 4.8048001875793995E-4 0.0 0.0 27.858615871600364 0.0 38 5.76576022509528E-4 0.0 0.0 28.397233972628015 0.0 39 5.76576022509528E-4 0.0 0.0 28.966218410841165 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTGGTT 35 1.2117744E-7 45.000004 45 ATCTCCG 35 1.2117744E-7 45.000004 24 TTGGACG 30 2.1653032E-6 45.000004 1 CGAAACC 35 1.2117744E-7 45.000004 31 TTATGCG 30 2.1653032E-6 45.000004 1 CCGGAAC 30 2.1653032E-6 45.000004 28 ATAGACG 35 1.2117744E-7 45.000004 1 CCCGTCG 30 2.1653032E-6 45.000004 40 CGTCGCA 30 2.1653032E-6 45.000004 42 TAGGCCG 30 2.1653032E-6 45.000004 1 CGACTTA 35 1.2117744E-7 45.000004 29 TCGAACG 35 1.2117744E-7 45.000004 1 TATCCGA 30 2.1653032E-6 45.000004 30 ACGCGTT 30 2.1653032E-6 45.000004 26 ACGCGAT 40 6.8139343E-9 45.0 26 GTCGACG 20 7.0329796E-4 45.0 33 CTCCGAT 20 7.0329796E-4 45.0 11 TTTACGC 20 7.0329796E-4 45.0 26 CGCGGAC 25 3.8905506E-5 45.0 40 ACGTTCG 20 7.0329796E-4 45.0 41 >>END_MODULE