##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935126.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 395073 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.027336720049206 33.0 31.0 34.0 30.0 34.0 2 32.33417368435707 34.0 31.0 34.0 30.0 34.0 3 32.38491620535952 34.0 31.0 34.0 30.0 34.0 4 35.909454708370355 37.0 35.0 37.0 35.0 37.0 5 30.39671149382519 37.0 35.0 37.0 0.0 37.0 6 32.87692907386736 37.0 35.0 37.0 17.0 37.0 7 35.04392352805684 37.0 35.0 37.0 32.0 37.0 8 35.59789962867622 37.0 35.0 37.0 35.0 37.0 9 37.44705408873803 39.0 37.0 39.0 35.0 39.0 10 37.3887585332331 39.0 37.0 39.0 35.0 39.0 11 37.25620834630562 39.0 37.0 39.0 34.0 39.0 12 36.9736656263526 39.0 35.0 39.0 33.0 39.0 13 36.83253221556522 39.0 35.0 39.0 33.0 39.0 14 37.98247918739069 40.0 36.0 41.0 33.0 41.0 15 38.102181115895036 40.0 37.0 41.0 33.0 41.0 16 38.18891192260671 40.0 36.0 41.0 34.0 41.0 17 38.194799442128414 40.0 36.0 41.0 34.0 41.0 18 38.14920027437967 40.0 36.0 41.0 34.0 41.0 19 38.102221614739555 40.0 36.0 41.0 34.0 41.0 20 38.04814806377556 40.0 36.0 41.0 34.0 41.0 21 37.98863501175732 40.0 36.0 41.0 34.0 41.0 22 37.96981317376789 40.0 36.0 41.0 34.0 41.0 23 37.92062226474601 40.0 35.0 41.0 34.0 41.0 24 37.90069177088791 40.0 35.0 41.0 34.0 41.0 25 37.82010413265397 40.0 35.0 41.0 34.0 41.0 26 37.73803069306179 40.0 35.0 41.0 33.0 41.0 27 37.7011058715731 40.0 35.0 41.0 33.0 41.0 28 37.61270195634731 39.0 35.0 41.0 33.0 41.0 29 37.61485598864007 39.0 35.0 41.0 33.0 41.0 30 37.496558863804914 39.0 35.0 41.0 33.0 41.0 31 32.925925082199996 38.0 33.0 41.0 9.0 41.0 32 33.80315789740124 38.0 33.0 41.0 16.0 41.0 33 35.74588493772037 38.0 34.0 41.0 29.0 41.0 34 36.53166123729032 38.0 35.0 40.0 31.0 41.0 35 36.69102925282163 39.0 35.0 40.0 31.0 41.0 36 36.83384083447869 39.0 35.0 41.0 32.0 41.0 37 36.87999686133955 39.0 35.0 41.0 32.0 41.0 38 36.88330511070106 39.0 35.0 41.0 32.0 41.0 39 36.88197624236533 39.0 35.0 41.0 32.0 41.0 40 36.82682440966606 39.0 35.0 41.0 32.0 41.0 41 36.794453177007796 39.0 35.0 41.0 32.0 41.0 42 36.69571446289673 39.0 35.0 41.0 32.0 41.0 43 36.64926988176869 39.0 35.0 41.0 31.0 41.0 44 36.58141659895766 39.0 35.0 41.0 31.0 41.0 45 36.5640451258375 39.0 35.0 41.0 31.0 41.0 46 36.557899426182 39.0 35.0 41.0 31.0 41.0 47 36.46982962642347 39.0 35.0 41.0 31.0 41.0 48 36.460180776717216 39.0 35.0 41.0 31.0 41.0 49 36.40689442204352 39.0 35.0 40.0 31.0 41.0 50 36.207842601240785 38.0 35.0 40.0 31.0 41.0 51 35.610856727743986 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 4.0 11 4.0 12 6.0 13 8.0 14 9.0 15 12.0 16 29.0 17 71.0 18 114.0 19 179.0 20 332.0 21 506.0 22 806.0 23 1220.0 24 1788.0 25 2225.0 26 2564.0 27 3138.0 28 4017.0 29 4695.0 30 6148.0 31 8863.0 32 14582.0 33 15758.0 34 30043.0 35 44165.0 36 43489.0 37 43399.0 38 65483.0 39 101287.0 40 127.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.929028306161136 22.25335570894493 24.01632103434049 10.80129495055344 2 32.492729191820246 25.455042485819074 23.87432196075156 18.177906361609118 3 32.05255737547238 24.55773996198171 24.975384296066803 18.414318366479108 4 28.17707107294095 27.434423511604184 24.93134180265419 19.457163612800674 5 22.586205587321835 40.84688146241328 19.85582411351826 16.711088836746626 6 26.525730687746314 33.300681139941226 23.82673581844368 16.34685235386878 7 77.60337962857497 8.043829874478895 8.56778367542201 5.7850068215241235 8 78.16884474514836 6.551194336236595 8.929742098295758 6.350218820319283 9 72.70074138197245 8.761418775770553 10.887101877374562 7.65073796488244 10 42.233966887132254 25.060684987331456 17.827338238755875 14.878009886780418 11 32.59296383200067 26.945146846279044 21.961004675085363 18.500884646634926 12 30.130380967568023 22.97752567247066 27.58502858965305 19.307064770308273 13 24.98702771386554 28.228960217478793 28.2608530575362 18.523159011119464 14 19.2746656946944 32.34921141156191 27.6498267408808 20.72629615286289 15 19.170887405618707 27.42379256491838 34.319986432887085 19.085333596575822 16 20.68908783946258 27.223323284557537 30.74874769979219 21.338841176187692 17 20.698453197257216 25.66892700842629 27.6574202742278 25.975199520088694 18 21.666122463443465 27.137769475514652 29.490246106415775 21.70586195462611 19 23.05067671038011 29.406717239598755 26.705191192513787 20.837414857507348 20 24.966778291606868 28.62053342040585 26.963118208533615 19.44957007945367 21 23.027389874782635 28.38184335553176 28.324385619872782 20.26638114981282 22 21.136600071379213 26.66393299466175 26.68747294803745 25.51199398592159 23 20.348138192182205 28.15834035735168 28.033047057126154 23.460474393339965 24 22.33865640020958 26.016963953497203 28.74607983840961 22.898299807883607 25 21.40895480075834 28.377793471080025 27.006148230833286 23.20710349732834 26 19.419955299400364 30.73204192642879 26.423471105340024 23.424531668830824 27 21.021937717839485 29.363940335077316 28.21959485968416 21.394527087399037 28 18.72666570481911 30.13721514758032 29.03944334338211 22.09667580421846 29 20.531142345844945 28.62382395152288 27.957111723656137 22.887921978976035 30 20.90474418651743 29.912699678287304 27.665266925353038 21.517289209842232 31 24.266148281456847 31.63187562804849 22.474580647120913 21.627395443373757 32 24.27652611036441 31.274979560739407 23.911277156373632 20.537217172522546 33 24.042898401054995 28.047221652707222 24.820223098009738 23.08965684822805 34 20.96827674885401 29.85321700040246 26.068853098035046 23.109653152708486 35 23.785224502813403 27.4928937183761 26.026329311291835 22.695552467518663 36 24.30234412374422 27.9583773125473 26.504975029931177 21.2343035337773 37 22.742379256491837 30.002809607338392 27.45036993163289 19.804441204536882 38 24.19552842132973 28.320082617642818 23.836354294016548 23.648034667010904 39 24.215271608031934 26.49231914101951 26.141244782609796 23.151164468338763 40 23.58981757801723 25.916476195538547 27.13903506440582 23.354671162038407 41 21.967585737319432 26.865667863913757 26.29387480288453 24.87287159588228 42 23.35112751314314 26.379681729705652 26.65962999243178 23.609560764719433 43 24.185656827978626 25.33177412781942 27.487325127254962 22.995243916946993 44 21.55297881657314 25.96431545562466 26.36272283856401 26.11998288923819 45 22.32270998018088 26.114920533673526 25.509462808139254 26.052906678006345 46 23.946713645326305 26.440683114259894 26.57812606784063 23.03447717257317 47 21.844823614876237 25.898504833283976 29.02552186557927 23.231149686260512 48 21.820018072609365 23.853060067379953 29.18447983030984 25.142442029700838 49 23.259751995200887 22.461418522652778 31.03553014253062 23.243299339615717 50 21.064208386804463 24.652152893262762 29.085763896798824 25.197874823133954 51 20.971567279971044 23.576402335770858 26.556104821134323 28.895925563123775 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 757.0 1 869.0 2 981.0 3 1037.5 4 1094.0 5 908.5 6 723.0 7 748.0 8 773.0 9 856.5 10 940.0 11 986.0 12 1032.0 13 1095.0 14 1158.0 15 1209.5 16 1261.0 17 1328.0 18 1395.0 19 1363.0 20 1331.0 21 1425.5 22 1520.0 23 1461.5 24 1403.0 25 1595.0 26 2472.5 27 3158.0 28 3777.0 29 4396.0 30 5048.5 31 5701.0 32 6136.0 33 6571.0 34 7997.0 35 9423.0 36 9787.0 37 10151.0 38 11823.0 39 13495.0 40 14832.5 41 16170.0 42 18952.0 43 21734.0 44 26319.0 45 30904.0 46 34531.5 47 38159.0 48 43020.0 49 47881.0 50 45039.0 51 42197.0 52 36121.5 53 30046.0 54 25676.5 55 21307.0 56 18756.0 57 16205.0 58 15479.0 59 14753.0 60 14215.0 61 13677.0 62 12435.0 63 11193.0 64 9273.0 65 7353.0 66 6354.5 67 5356.0 68 4448.0 69 3540.0 70 2872.0 71 2204.0 72 1872.0 73 1540.0 74 1296.5 75 698.5 76 344.0 77 250.0 78 156.0 79 141.0 80 126.0 81 89.5 82 53.0 83 57.5 84 62.0 85 36.0 86 10.0 87 5.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 395073.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.368080885721916 #Duplication Level Percentage of deduplicated Percentage of total 1 71.83331347371691 23.251065008066867 2 12.18769746252814 7.889847545556372 3 5.19971856467109 5.0491473325279115 4 2.7003482509941437 3.4962036243118457 5 1.4815923326573466 2.3978150231559208 6 0.8963448922491334 1.7407778384294186 7 0.5410964039727455 1.225997651953416 8 0.3655652563576441 0.9466116629435114 9 0.3097559472871518 0.9023585000961549 >10 3.5051606102784496 29.59576409587288 >50 0.9252199713035721 18.99002121443897 >100 0.050143040402815975 3.061775083731882 >500 0.0016175174323489025 0.296596372252755 >1k 0.002426276148523354 1.1560190466621056 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCTTCTGC 1543 0.39056073181412043 Illumina Single End Adapter 2 (95% over 21bp) CTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCTTCTGCT 1537 0.3890420251447201 Illumina Single End Adapter 2 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCTTCTGC 1336 0.3381653517198087 Illumina Single End Adapter 2 (95% over 21bp) AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 584 0.14782078248829963 No Hit TCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCTTCTGC 549 0.13896166025013099 Illumina Single End Adapter 2 (95% over 21bp) ACTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCTTCTGC 486 0.12301524022142743 Illumina Single End Adapter 2 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.41561939185922603 0.0 2 0.0 0.0 0.0 1.4749172937659623 0.0 3 0.0 0.0 0.0 2.0991057348895015 0.0 4 0.0 0.0 0.0 2.820238285076429 0.0 5 0.0 0.0 0.0 4.637370815013934 0.0 6 0.0 0.0 0.0 5.765010517043685 0.0 7 0.0 0.0 0.0 6.6833218164744235 0.0 8 0.0 0.0 0.0 8.154695461345119 0.0 9 0.0 0.0 0.0 8.70446727566804 0.0 10 0.0 0.0 0.0 9.83868803993186 0.0 11 2.5311777823338975E-4 0.0 0.0 11.73302149223055 0.0 12 2.5311777823338975E-4 0.0 0.0 13.08618913466625 0.0 13 2.5311777823338975E-4 0.0 0.0 13.689621917974653 0.0 14 2.5311777823338975E-4 0.0 0.0 13.96349535402318 0.0 15 2.5311777823338975E-4 0.0 0.0 14.431763243754952 0.0 16 2.5311777823338975E-4 0.0 0.0 15.332103180931119 0.0 17 2.5311777823338975E-4 0.0 0.0 16.411397387318292 0.0 18 5.062355564667795E-4 0.0 0.0 17.647877733988402 0.0 19 5.062355564667795E-4 0.0 0.0 18.38343799753463 0.0 20 5.062355564667795E-4 0.0 0.0 18.969911889701397 0.0 21 5.062355564667795E-4 0.0 0.0 19.663707719839117 0.0 22 5.062355564667795E-4 0.0 0.0 20.381043503352544 0.0 23 5.062355564667795E-4 0.0 0.0 21.117869355789942 0.0 24 5.062355564667795E-4 0.0 0.0 21.662578814548198 0.0 25 5.062355564667795E-4 0.0 0.0 22.18400143770898 0.0 26 5.062355564667795E-4 0.0 0.0 22.64467579409375 0.0 27 5.062355564667795E-4 0.0 0.0 23.08459449266338 0.0 28 5.062355564667795E-4 0.0 0.0 23.545015731269917 0.0 29 5.062355564667795E-4 0.0 0.0 24.04087345882913 0.0 30 5.062355564667795E-4 0.0 0.0 24.603048044285487 0.0 31 7.593533347001693E-4 0.0 0.0 25.09688082961883 0.0 32 7.593533347001693E-4 0.0 0.0 25.655258648401688 0.0 33 7.593533347001693E-4 0.0 0.0 26.186552864913573 0.0 34 7.593533347001693E-4 0.0 0.0 26.719112670316626 0.0 35 7.593533347001693E-4 0.0 0.0 27.24205400014681 0.0 36 7.593533347001693E-4 0.0 0.0 27.763729741085825 0.0 37 7.593533347001693E-4 0.0 0.0 28.27654635978667 0.0 38 7.593533347001693E-4 0.0 0.0 28.782275680696983 0.0 39 7.593533347001693E-4 0.0 0.0 29.328756963902872 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGCA 20 7.0276594E-4 45.0 30 GTCATGT 20 7.0276594E-4 45.0 9 ACAACCG 20 7.0276594E-4 45.0 12 ATCCTCC 25 3.8861417E-5 45.0 43 CTATGTT 20 7.0276594E-4 45.0 11 CGGAATC 20 7.0276594E-4 45.0 20 CTAGACA 20 7.0276594E-4 45.0 45 AGTCCGA 35 1.2092278E-7 45.0 44 TCCATCG 20 7.0276594E-4 45.0 24 TCGCACG 25 3.8861417E-5 45.0 1 ATTAGTC 25 3.8861417E-5 45.0 31 GGTCGTT 20 7.0276594E-4 45.0 24 CGAGTTT 35 1.2092278E-7 45.0 14 AATCACG 25 3.8861417E-5 45.0 37 GTACAAG 35 1.2092278E-7 45.0 1 TTTACCG 20 7.0276594E-4 45.0 1 GCGAATA 20 7.0276594E-4 45.0 37 CCCTACC 40 6.7957444E-9 45.0 35 TCCGAAA 25 3.8861417E-5 45.0 24 GGCACGA 20 7.0276594E-4 45.0 8 >>END_MODULE