##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935125.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 723034 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.030957050429166 33.0 31.0 34.0 30.0 34.0 2 32.3633245462869 34.0 31.0 34.0 30.0 34.0 3 32.40881341679644 34.0 31.0 34.0 30.0 34.0 4 35.92134809704661 37.0 35.0 37.0 35.0 37.0 5 30.3976604143097 37.0 35.0 37.0 0.0 37.0 6 32.87318991914626 37.0 35.0 37.0 17.0 37.0 7 35.07464932492801 37.0 35.0 37.0 32.0 37.0 8 35.62526520191305 37.0 35.0 37.0 35.0 37.0 9 37.503620853237884 39.0 37.0 39.0 35.0 39.0 10 37.43041267768874 39.0 37.0 39.0 35.0 39.0 11 37.278801550134574 39.0 37.0 39.0 34.0 39.0 12 37.04975423009153 39.0 37.0 39.0 34.0 39.0 13 36.92326916853149 39.0 37.0 39.0 33.0 39.0 14 37.90658253968693 40.0 37.0 41.0 33.0 41.0 15 38.10691060171444 40.0 37.0 41.0 33.0 41.0 16 38.24398022776246 40.0 37.0 41.0 34.0 41.0 17 38.27415169964345 40.0 37.0 41.0 34.0 41.0 18 38.21597047994977 40.0 37.0 41.0 34.0 41.0 19 38.213007963664225 40.0 37.0 41.0 34.0 41.0 20 38.1231975259808 40.0 36.0 41.0 34.0 41.0 21 38.08246500164584 40.0 36.0 41.0 34.0 41.0 22 38.09183385566931 40.0 36.0 41.0 34.0 41.0 23 38.04276700680742 40.0 36.0 41.0 34.0 41.0 24 38.02940249006271 40.0 36.0 41.0 34.0 41.0 25 37.9655728499628 40.0 36.0 41.0 34.0 41.0 26 37.90482190325766 40.0 36.0 41.0 34.0 41.0 27 37.832775498800885 40.0 36.0 41.0 34.0 41.0 28 37.797710757723706 40.0 36.0 41.0 34.0 41.0 29 37.77863696589649 40.0 36.0 41.0 34.0 41.0 30 37.632553932456844 40.0 36.0 41.0 33.0 41.0 31 33.029951565209934 38.0 33.0 41.0 9.0 41.0 32 33.94490162288357 38.0 33.0 41.0 16.0 41.0 33 35.900198330922194 38.0 34.0 41.0 29.0 41.0 34 36.74402033652636 38.0 35.0 41.0 31.0 41.0 35 36.93064641496804 39.0 35.0 41.0 32.0 41.0 36 37.09072049170578 39.0 35.0 41.0 32.0 41.0 37 37.173431678178346 39.0 35.0 41.0 32.0 41.0 38 37.17535551578487 39.0 35.0 41.0 33.0 41.0 39 37.18200527222786 39.0 35.0 41.0 33.0 41.0 40 37.11945772951203 39.0 35.0 41.0 33.0 41.0 41 37.05139592328992 39.0 35.0 41.0 32.0 41.0 42 37.02174448227884 39.0 35.0 41.0 32.0 41.0 43 37.01401455533212 39.0 35.0 41.0 32.0 41.0 44 36.952182055062416 39.0 35.0 41.0 32.0 41.0 45 36.96068787913155 39.0 35.0 41.0 32.0 41.0 46 36.91794715047978 39.0 35.0 41.0 32.0 41.0 47 36.83893565171209 39.0 35.0 41.0 32.0 41.0 48 36.83364267793769 39.0 35.0 41.0 32.0 41.0 49 36.817531402396014 39.0 35.0 41.0 32.0 41.0 50 36.65052957398961 39.0 35.0 41.0 32.0 41.0 51 36.02827529549094 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 1.0 10 8.0 11 15.0 12 8.0 13 16.0 14 18.0 15 26.0 16 42.0 17 91.0 18 147.0 19 265.0 20 448.0 21 740.0 22 1241.0 23 1960.0 24 2815.0 25 3565.0 26 4337.0 27 5208.0 28 6419.0 29 8204.0 30 10852.0 31 15912.0 32 24383.0 33 28164.0 34 54430.0 35 70925.0 36 80755.0 37 80266.0 38 121515.0 39 200078.0 40 177.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.1554173109425 21.51696877325271 23.848671016853977 12.478942898950809 2 32.380496629480774 23.889471311169324 25.044050487252328 18.685981572097575 3 32.45670328089689 23.93856997043016 25.511939964095742 18.09278678457721 4 28.207387204474475 25.833778217898466 26.013714431133252 19.945120146493803 5 21.54269370458374 39.6429490176119 21.378662690827817 17.435694586976545 6 28.003385732897762 31.2799951316259 24.629270546060074 16.087348589416266 7 77.9613406838406 6.238710766022068 9.727896613437267 6.072051936700072 8 77.15003720433617 5.679954193025501 10.19412641729158 6.975882185346747 9 71.94627085309958 7.500200543819516 11.904142820392956 8.649385782687952 10 41.29916435464999 24.7910886624972 19.145434377913073 14.76431260493974 11 31.073780762730387 24.973652691298057 24.772693953534688 19.17987259243687 12 29.167922946915358 21.884033116008375 29.293228257592315 19.654815679483953 13 25.092457616101036 24.987483299540546 30.354450828038516 19.565608256319898 14 18.572155666261892 28.451774052119266 31.792695779174977 21.18337450244387 15 17.79971619591886 27.153633162479217 35.07746523676618 19.969185404835734 16 22.496314142903376 25.529228224398853 30.692470893484952 21.281986739212815 17 22.229660015988184 25.610690506947115 27.628991167773577 24.530658309291127 18 22.30019611802488 26.573715758871643 29.30415443810388 21.821933684999596 19 23.074295261357 28.19493965705624 27.372018466628123 21.358746614958633 20 23.3370768179643 29.966917185083965 27.143813430627052 19.552192566324685 21 22.54472127175209 27.48888710627716 31.243758938030574 18.722632683940173 22 20.294204698534234 25.306002207365076 29.693762672294806 24.70603042180589 23 19.741118674917086 26.52724491517688 30.703811992243796 23.02782441766224 24 22.20836087929475 27.084756733431625 27.88665539933115 22.820226987942476 25 21.367598204233825 27.33052664190066 27.465928296594626 23.83594685727089 26 18.646149420359208 28.538768577964525 27.934785916015016 24.880296085661254 27 21.86148922457312 27.92510449024527 29.036117250364434 21.177289034817175 28 19.4311747442029 26.802059100955145 29.677995778898364 24.088770375943593 29 19.49106127789288 26.823634849813427 31.04542801583328 22.639875856460414 30 23.2120481194522 28.25911367930139 26.77011039591499 21.758727805331425 31 24.279356157525093 28.73059911428785 24.804504352492415 22.185540375694643 32 22.729636503954172 27.45126785185759 26.707042822329242 23.112052821859 33 22.429788917257003 26.069313476268057 26.16612773396548 25.334769872509455 34 20.07485125180835 26.011639839896876 29.250906596370296 24.662602311924473 35 19.219013213763112 26.23555738734278 28.361598486378238 26.18383091251587 36 21.937695875989235 26.09407026502212 26.027130121128465 25.941103737860182 37 20.539559688755993 28.96419808750349 27.561636105632655 22.93460611810786 38 21.621389865483504 26.22476951291364 26.603451566592994 25.55038905500986 39 21.496776085218674 24.095547373982413 27.61695853860261 26.7907180021963 40 21.950558341654748 24.826909937845247 28.751483332734008 24.471048387765997 41 18.797594580614465 25.595615143962803 26.463624117261432 29.143166158161304 42 20.70455884508889 24.581831559788338 28.868490278465465 25.845119316657307 43 21.973378845254857 24.30259157937248 28.960878741525292 24.763150833847373 44 21.829125601285693 24.242290127435222 28.236569787866127 25.69201448341295 45 20.75172121919578 23.793625196048872 27.503547551014197 27.95110603374115 46 21.911279414246078 24.589991618651403 27.763977904220273 25.734751062882243 47 18.38502753674101 24.88043439174368 31.796015125153176 24.938522946362134 48 19.756470650066248 23.928197014248294 29.46320643289251 26.85212590279295 49 21.404525928241274 21.962590970825715 31.22771543246929 25.405167668463726 50 19.80197335118404 23.216473914089793 29.749223411347188 27.232329323378984 51 19.26493083312818 23.83995773366121 26.551863397848514 30.343248035362098 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 838.0 1 1057.0 2 1276.0 3 1443.0 4 1610.0 5 1376.0 6 1142.0 7 1167.0 8 1192.0 9 1264.0 10 1336.0 11 1440.5 12 1545.0 13 1609.5 14 1674.0 15 1783.5 16 1893.0 17 1886.5 18 1880.0 19 1967.5 20 2055.0 21 2203.0 22 2351.0 23 2408.5 24 2466.0 25 3122.0 26 4985.5 27 6193.0 28 7257.5 29 8322.0 30 9451.5 31 10581.0 32 12034.5 33 13488.0 34 15172.5 35 16857.0 36 18466.5 37 20076.0 38 22079.5 39 24083.0 40 26748.5 41 29414.0 42 34818.5 43 40223.0 44 46803.5 45 53384.0 46 60183.5 47 66983.0 48 75990.5 49 84998.0 50 84148.0 51 83298.0 52 69684.5 53 56071.0 54 49856.5 55 43642.0 56 38286.5 57 32931.0 58 30966.5 59 29002.0 60 26709.0 61 24416.0 62 21299.0 63 18182.0 64 15533.5 65 12885.0 66 10876.0 67 8867.0 68 7089.5 69 5312.0 70 4309.5 71 3307.0 72 2868.0 73 2429.0 74 2026.0 75 1178.5 76 734.0 77 581.5 78 429.0 79 326.0 80 223.0 81 120.5 82 18.0 83 22.0 84 26.0 85 13.5 86 1.0 87 0.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 723034.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.04711746494724 #Duplication Level Percentage of deduplicated Percentage of total 1 69.02338943048261 18.668837217550607 2 13.140822425526387 7.108427354584503 3 5.4986096521263965 4.4616462346486605 4 2.713057152414245 2.9352150196185334 5 1.5916962637317709 2.152539790683542 6 0.9885721618931188 1.6042816431180014 7 0.7110413365359709 1.346213298620504 8 0.5021732388213064 1.08658708625223 9 0.39091720566156424 0.9515865222537541 >10 3.866677133359717 25.34968627093287 >50 1.4677454052109122 26.405132943601927 >100 0.0959387191927419 4.620443372496408 >500 0.0070199062823957485 1.3654690194042873 >1k 0.002339968760798583 1.9439342262341917 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTAGTCACCTCGTATGCCGTCTTCTGC 4208 0.5819919948439493 RNA PCR Primer, Index 7 (95% over 23bp) CTGTCTCTTATACACATCTGACGCTAGTCACCTCGTATGCCGTCTTCTGCT 3887 0.5375957423855586 TruSeq Adapter, Index 7 (95% over 24bp) GCTGTCTCTTATACACATCTGACGCTAGTCACCTCGTATGCCGTCTTCTGC 3121 0.43165328324809066 Illumina PCR Primer Index 3 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCTAGTCACCTCGTATGCCGTCTTCTGC 1070 0.14798750819463538 Illumina PCR Primer Index 3 (95% over 22bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 978 0.13526334861154524 No Hit ACTGTCTCTTATACACATCTGACGCTAGTCACCTCGTATGCCGTCTTCTGC 906 0.12530531067695294 TruSeq Adapter, Index 7 (95% over 23bp) CGCTGTCTCTTATACACATCTGACGCTAGTCACCTCGTATGCCGTCTTCTG 863 0.11935814913268256 TruSeq Adapter, Index 7 (95% over 22bp) TGTCTCTTATACACATCTGACGCTAGTCACCTCGTATGCCGTCTTCTGCTT 764 0.10566584697261816 Illumina PCR Primer Index 3 (95% over 24bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTAGTCACCTCGTATGCC 761 0.10525092872534349 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.5638738980462883 0.0 2 0.0 0.0 0.0 1.9170606084914403 0.0 3 0.0 0.0 0.0 2.660870719772514 0.0 4 0.0 0.0 0.0 3.4326186597034165 0.0 5 0.0 0.0 0.0 5.451610850942003 0.0 6 0.0 0.0 0.0 6.651969340307648 0.0 7 0.0 0.0 0.0 7.717341093226598 0.0 8 0.0 0.0 0.0 9.393749118298725 0.0 9 0.0 0.0 0.0 9.998976534990057 0.0 10 0.0 0.0 0.0 11.32422541678538 0.0 11 0.0 0.0 0.0 13.354558706782807 0.0 12 0.0 0.0 0.0 14.93871657487753 0.0 13 0.0 0.0 0.0 15.574924554032037 0.0 14 0.0 0.0 0.0 15.880719302273475 0.0 15 0.0 0.0 0.0 16.423985594038456 0.0 16 0.0 0.0 0.0 17.410522879975215 0.0 17 0.0 0.0 0.0 18.499406666906395 0.0 18 1.3830608242489288E-4 0.0 0.0 19.633931461037793 0.0 19 1.3830608242489288E-4 0.0 0.0 20.426287007250004 0.0 20 1.3830608242489288E-4 0.0 0.0 21.089188060312516 0.0 21 1.3830608242489288E-4 0.0 0.0 21.840190087879684 0.0 22 1.3830608242489288E-4 0.0 0.0 22.63268394017432 0.0 23 1.3830608242489288E-4 0.0 0.0 23.37690896970267 0.0 24 1.3830608242489288E-4 0.0 0.0 23.980338407322478 0.0 25 1.3830608242489288E-4 0.0 0.0 24.50396523538312 0.0 26 1.3830608242489288E-4 0.0 0.0 24.986100238716297 0.0 27 1.3830608242489288E-4 0.0 0.0 25.562559990263253 0.0 28 1.3830608242489288E-4 0.0 0.0 26.063228008641364 0.0 29 1.3830608242489288E-4 0.0 0.0 26.671498159146044 0.0 30 2.7661216484978576E-4 0.0 0.0 27.252936929660294 0.0 31 2.7661216484978576E-4 0.0 0.0 27.793298793694348 0.0 32 2.7661216484978576E-4 0.0 0.0 28.372939585137075 0.0 33 2.7661216484978576E-4 0.0 0.0 28.920769977622076 0.0 34 2.7661216484978576E-4 0.0 0.0 29.484643875668365 0.0 35 2.7661216484978576E-4 0.0 0.0 30.0821261517439 0.0 36 2.7661216484978576E-4 0.0 0.0 30.63839321525682 0.0 37 2.7661216484978576E-4 0.0 0.0 31.22688559597474 0.0 38 2.7661216484978576E-4 0.0 0.0 31.85161417028798 0.0 39 2.7661216484978576E-4 0.0 0.0 32.83192768251562 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAACGG 35 1.2110831E-7 45.000004 2 CTAACGC 55 1.8189894E-12 45.000004 29 TATCACG 40 6.8084773E-9 45.0 1 CACGGAA 20 7.0315483E-4 45.0 8 ACCGAAC 20 7.0315483E-4 45.0 11 GCCGGAC 20 7.0315483E-4 45.0 13 ATTCGTC 20 7.0315483E-4 45.0 19 CGTTCCA 20 7.0315483E-4 45.0 24 CGCTACA 20 7.0315483E-4 45.0 29 CGCTAAC 25 3.8893646E-5 45.0 37 TGCGAAG 40 6.8084773E-9 45.0 1 TCGTCTC 20 7.0315483E-4 45.0 31 ACTACGG 45 3.8380676E-10 45.0 2 TATTACG 20 7.0315483E-4 45.0 21 CTACCGA 25 3.8893646E-5 45.0 40 GTCCCCG 20 7.0315483E-4 45.0 29 GACGCGA 40 6.8084773E-9 45.0 26 GCTACGA 25 3.8893646E-5 45.0 10 ATCGGAA 25 3.8893646E-5 45.0 21 GCTAACG 20 7.0315483E-4 45.0 1 >>END_MODULE