##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935122.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 609006 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.051600476842594 33.0 31.0 34.0 30.0 34.0 2 32.362713996249624 34.0 31.0 34.0 30.0 34.0 3 32.413734840050836 34.0 31.0 34.0 30.0 34.0 4 35.921192894651284 37.0 35.0 37.0 35.0 37.0 5 30.39549035641685 37.0 35.0 37.0 0.0 37.0 6 32.88245764409546 37.0 35.0 37.0 17.0 37.0 7 35.064411516471104 37.0 35.0 37.0 32.0 37.0 8 35.62249304604553 37.0 35.0 37.0 35.0 37.0 9 37.493817794898575 39.0 37.0 39.0 35.0 39.0 10 37.446018594233884 39.0 37.0 39.0 35.0 39.0 11 37.30397401667636 39.0 37.0 39.0 34.0 39.0 12 37.04746751263534 39.0 37.0 39.0 34.0 39.0 13 36.98797056186638 39.0 37.0 39.0 33.0 39.0 14 38.16377671155949 40.0 37.0 41.0 33.0 41.0 15 38.270553984689805 40.0 37.0 41.0 34.0 41.0 16 38.36846106606503 40.0 37.0 41.0 34.0 41.0 17 38.34909179876717 40.0 37.0 41.0 34.0 41.0 18 38.262823354778114 40.0 37.0 41.0 34.0 41.0 19 38.25319783384729 40.0 37.0 41.0 34.0 41.0 20 38.17221012600861 40.0 36.0 41.0 34.0 41.0 21 38.10755723260526 40.0 36.0 41.0 34.0 41.0 22 38.10254578772623 40.0 36.0 41.0 34.0 41.0 23 38.044060321244785 40.0 36.0 41.0 34.0 41.0 24 38.016334814435325 40.0 36.0 41.0 34.0 41.0 25 37.948905265301164 40.0 36.0 41.0 34.0 41.0 26 37.875687595852916 40.0 36.0 41.0 34.0 41.0 27 37.83273399605258 40.0 36.0 41.0 34.0 41.0 28 37.78508750324299 40.0 36.0 41.0 33.0 41.0 29 37.75962962598069 40.0 36.0 41.0 33.0 41.0 30 37.63401838405533 40.0 36.0 41.0 33.0 41.0 31 32.98924476934546 38.0 33.0 41.0 9.0 41.0 32 33.85889958391215 38.0 33.0 41.0 16.0 41.0 33 35.80295432228911 38.0 34.0 41.0 29.0 41.0 34 36.59383158786613 38.0 35.0 41.0 31.0 41.0 35 36.754701924118976 39.0 35.0 41.0 31.0 41.0 36 36.89290417499992 39.0 35.0 41.0 32.0 41.0 37 36.97070472212096 39.0 35.0 41.0 32.0 41.0 38 36.998164221698964 39.0 35.0 41.0 32.0 41.0 39 36.996786566963216 39.0 35.0 41.0 32.0 41.0 40 36.93574775946378 39.0 35.0 41.0 32.0 41.0 41 36.887372209797604 39.0 35.0 41.0 32.0 41.0 42 36.77048666187197 39.0 35.0 41.0 32.0 41.0 43 36.74301402613439 39.0 35.0 41.0 32.0 41.0 44 36.67879298397717 39.0 35.0 41.0 32.0 41.0 45 36.62398892621748 39.0 35.0 41.0 31.0 41.0 46 36.572385165334985 39.0 35.0 41.0 31.0 41.0 47 36.45055221130826 39.0 35.0 41.0 31.0 41.0 48 36.44981822839184 39.0 35.0 41.0 31.0 41.0 49 36.41319461548819 39.0 35.0 41.0 31.0 41.0 50 36.22795834523798 38.0 35.0 40.0 31.0 41.0 51 35.58099263389852 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 2.0 11 5.0 12 8.0 13 11.0 14 13.0 15 24.0 16 50.0 17 83.0 18 165.0 19 297.0 20 549.0 21 837.0 22 1398.0 23 2189.0 24 2929.0 25 3587.0 26 4090.0 27 4711.0 28 5773.0 29 7048.0 30 9036.0 31 12706.0 32 20847.0 33 22692.0 34 42752.0 35 65360.0 36 67252.0 37 68648.0 38 102526.0 39 163229.0 40 185.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.5882503620654 23.303547091490067 23.181380807414047 10.926821739030485 2 32.348942374951974 24.37020324922907 24.488100281442218 18.792754094376736 3 31.241071516536785 24.142947688528523 26.238165141230134 18.37781565370456 4 28.213186733792444 26.881015950581766 25.103365155679914 19.80243215994588 5 22.069076495141264 39.73179246181483 20.66350742028814 17.535623622755768 6 25.0613294450301 33.75993011563104 24.2477085611636 16.931031878175258 7 77.76803512609071 7.99171108330624 8.375122740991058 5.865131049611991 8 78.48526943905314 6.187295363264073 8.716334486031336 6.611100711651445 9 73.22259550809022 8.126685122970875 11.194799394423043 7.455919974515851 10 41.807469877144065 26.1025342935866 17.6356226375438 14.454373191725534 11 30.76143748994263 25.828152760399732 23.761670656775138 19.6487390928825 12 26.87099962890349 23.70370735263692 28.840602555639844 20.584690462819744 13 24.17168303760554 27.279369989786634 28.425171508983492 20.123775463624334 14 18.898007572995997 30.764557327842418 28.074107644259662 22.263327454901923 15 17.233984558444416 27.852599153374513 34.29949787030013 20.613918417880942 16 21.586158428652592 27.2772353638552 29.93254582056663 21.20406038692558 17 21.176638653806368 27.073296486405717 26.247688856924235 25.50237600286368 18 20.916214290171197 27.243902358925858 30.317271094209254 21.522612256693694 19 23.521443138491247 28.559324538674495 26.71106688604053 21.208165436793728 20 24.750659271008825 30.213167029553073 25.52257284821496 19.51360085122314 21 23.376616979143066 29.354062193147524 27.796277869183555 19.47304295852586 22 21.295028292003693 27.35211147345018 26.821246424501567 24.531613810044565 23 21.117690137699793 27.602191111417625 27.06607159863778 24.214047152244806 24 22.37564161929439 26.56541971671872 28.343727319599477 22.715211344387413 25 20.55004384193259 29.799870608828154 25.292033247619894 24.35805230161936 26 19.63806596322532 31.07013724002719 25.756724892693995 23.53507190405349 27 21.500116583416258 29.880822192227992 26.316653694709085 22.30240752964667 28 18.5083562395116 29.012522044117794 28.00021674663304 24.478904969737574 29 19.91343270838054 28.819748902309666 26.770672210126005 24.496146179183782 30 23.558224385309835 29.062275248519718 25.35902766146803 22.020472704702417 31 25.656397473916513 31.149282601485044 22.179256033602297 21.015063890996146 32 25.044088235583885 31.42497775062971 21.328032892943583 22.202901120842817 33 25.811568358932423 28.794297593127162 23.27940939826537 22.114724649675043 34 22.085168290624395 29.63353398817089 24.868556303221972 23.412741417982748 35 22.796162927787247 28.577386758094335 25.136698160609257 23.489752153509162 36 24.97725802373047 30.854375818957447 24.193686104898802 19.974680052413277 37 21.392235872881386 30.928595120573526 26.294650627415823 21.38451837912927 38 22.698462740925375 29.873268900470602 23.168080445841255 24.260187912762767 39 23.486468113614645 28.204319826077246 25.207140816346634 23.102071243961472 40 24.956404370400293 26.443746038626877 27.80071132304115 20.79913826793168 41 21.70471226884464 27.612864241074803 24.447213984755486 26.23520950532507 42 23.196979996913004 26.934545800862388 25.95869334620677 23.90978085601784 43 23.751490133102138 26.11665566513302 26.46246506602562 23.669389135739223 44 22.093870996344865 26.014357822418827 25.5399782596559 26.351792921580415 45 21.74297133361576 26.27740941796961 25.42651468130035 26.553104567114282 46 24.396968174369384 26.824037858411902 25.980368009510578 22.798625957708136 47 21.21506192057221 26.6504763499867 28.680341408787434 23.454120320653654 48 21.882707231127444 24.309284309185788 29.25291376439641 24.555094695290357 49 22.527200060426335 23.07973977267876 30.755690420127223 23.637369746767682 50 21.132796721214568 24.217988000118226 29.450777168041036 25.19843811062617 51 20.646758816826107 24.521269084376836 27.22124248365369 27.610729615143363 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1202.0 1 1214.5 2 1227.0 3 1332.0 4 1437.0 5 1262.0 6 1087.0 7 1125.5 8 1164.0 9 1282.5 10 1401.0 11 1484.5 12 1568.0 13 1642.0 14 1716.0 15 1780.0 16 1844.0 17 1839.5 18 1835.0 19 2038.0 20 2241.0 21 2272.5 22 2304.0 23 2588.0 24 2872.0 25 3027.5 26 3964.0 27 4745.0 28 5271.5 29 5798.0 30 7030.5 31 8263.0 32 9634.0 33 11005.0 34 12317.5 35 13630.0 36 15683.5 37 17737.0 38 17910.5 39 18084.0 40 21278.0 41 24472.0 42 29394.0 43 34316.0 44 39983.5 45 45651.0 46 51356.0 47 57061.0 48 63378.5 49 69696.0 50 67546.5 51 65397.0 52 56412.0 53 47427.0 54 41820.0 55 36213.0 56 32766.0 57 29319.0 58 27143.5 59 24968.0 60 21876.5 61 18785.0 62 18536.0 63 18287.0 64 15517.0 65 12747.0 66 10043.0 67 7339.0 68 5999.0 69 4659.0 70 3999.0 71 3339.0 72 2645.5 73 1952.0 74 1691.5 75 1173.5 76 916.0 77 664.0 78 412.0 79 270.5 80 129.0 81 104.0 82 79.0 83 72.0 84 65.0 85 33.0 86 1.0 87 1.0 88 1.0 89 1.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 609006.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.767207882834263 #Duplication Level Percentage of deduplicated Percentage of total 1 71.05870804269153 19.020432100643514 2 12.563342055968718 6.725711770305383 3 5.109495072417825 4.103007503391757 4 2.587657320726197 2.770574457336642 5 1.5547301731736614 2.0807892873527156 6 0.9621138309657548 1.5451860552246255 7 0.6119512280604186 1.146615801495426 8 0.4491093336100158 0.9617122315888367 9 0.3358498576806702 0.8090786662162921 >10 2.891426792951345 18.629896483299436 >50 1.616401905365397 30.94922701039302 >100 0.2514871282576324 8.97297053924174 >500 0.0056198240951426245 0.9512627401094712 >1k 0.002107434035678484 1.3335353534011405 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCAGACGAGATCGTATGCCGTCTTCTGCT 2761 0.4533617074380219 Illumina Single End Adapter 2 (95% over 23bp) GCTGTCTCTTATACACATCTGACGCAGACGAGATCGTATGCCGTCTTCTGC 2394 0.39309957537364165 Illumina Single End Adapter 2 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCAGACGAGATCGTATGCCGTCTTCTGC 1937 0.31805926378393645 Illumina Single End Adapter 2 (95% over 22bp) AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 988 0.16223157078912195 No Hit TCTGTCTCTTATACACATCTGACGCAGACGAGATCGTATGCCGTCTTCTGC 665 0.10919432649267823 Illumina Single End Adapter 2 (95% over 22bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGACGAGATCGTATGCC 658 0.10804491252959741 No Hit ACTGTCTCTTATACACATCTGACGCAGACGAGATCGTATGCCGTCTTCTGC 611 0.10032741877748332 Illumina Single End Adapter 2 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.5329996748800504 0.0 2 0.0 0.0 0.0 1.6477670170737233 0.0 3 0.0 0.0 0.0 2.3099936618030035 0.0 4 0.0 0.0 0.0 3.114911839949032 0.0 5 0.0 0.0 0.0 4.936568769437411 0.0 6 0.0 0.0 0.0 6.154947570303084 0.0 7 0.0 0.0 0.0 7.086301284388003 0.0 8 0.0 0.0 0.0 8.747861269018696 0.0 9 0.0 0.0 0.0 9.35442343753592 0.0 10 0.0 0.0 0.0 10.560979694781333 0.0 11 0.0 0.0 0.0 12.43156881869801 0.0 12 0.0 0.0 0.0 13.872441322417185 0.0 13 0.0 0.0 0.0 14.481138116865843 0.0 14 0.0 0.0 0.0 14.75108619619511 0.0 15 0.0 0.0 0.0 15.22579416294749 0.0 16 0.0 0.0 0.0 16.146638949369958 0.0 17 0.0 0.0 0.0 17.191456241810425 0.0 18 4.926059841774958E-4 0.0 0.0 18.359917636279445 0.0 19 4.926059841774958E-4 0.0 0.0 19.131667011490855 0.0 20 4.926059841774958E-4 0.0 0.0 19.765322509137842 0.0 21 4.926059841774958E-4 0.0 0.0 20.430176385782733 0.0 22 4.926059841774958E-4 0.0 0.0 21.151187344623864 0.0 23 4.926059841774958E-4 0.0 0.0 21.902411470494542 0.0 24 4.926059841774958E-4 0.0 0.0 22.459877242588743 0.0 25 4.926059841774958E-4 0.0 0.0 22.96315635642342 0.0 26 6.568079789033277E-4 0.0 0.0 23.411099398035486 0.0 27 6.568079789033277E-4 0.0 0.0 23.82767985865492 0.0 28 6.568079789033277E-4 0.0 0.0 24.233751391611904 0.0 29 6.568079789033277E-4 0.0 0.0 24.73817991940966 0.0 30 6.568079789033277E-4 0.0 0.0 25.25656561675911 0.0 31 6.568079789033277E-4 0.0 0.0 25.72552651369609 0.0 32 6.568079789033277E-4 0.0 0.0 26.23291067739891 0.0 33 6.568079789033277E-4 0.0 0.0 26.72600926756058 0.0 34 9.852119683549916E-4 0.0 0.0 27.23355763325813 0.0 35 9.852119683549916E-4 0.0 0.0 27.787082557478907 0.0 36 9.852119683549916E-4 0.0 0.0 28.283465187535096 0.0 37 9.852119683549916E-4 0.0 0.0 28.79249137118518 0.0 38 0.0011494139630808236 0.0 0.0 29.299875534888 0.0 39 0.0011494139630808236 0.0 0.0 29.846339773335565 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGGTG 30 2.1638134E-6 45.000004 13 TGACGCG 30 2.1638134E-6 45.000004 25 AAGCCCG 30 2.1638134E-6 45.000004 1 CTACGTT 30 2.1638134E-6 45.000004 19 CTACGGT 30 2.1638134E-6 45.000004 12 CGTCGAA 30 2.1638134E-6 45.000004 31 CCCGGAT 30 2.1638134E-6 45.000004 37 TGCACGA 30 2.1638134E-6 45.000004 38 CACTTCG 30 2.1638134E-6 45.000004 30 TCCGGAT 20 7.030671E-4 45.0 14 AACCGTA 20 7.030671E-4 45.0 13 TAATACG 20 7.030671E-4 45.0 1 CGAACGT 20 7.030671E-4 45.0 27 TCCGCTA 20 7.030671E-4 45.0 13 GTCGATG 40 6.8066583E-9 45.0 1 GTCGACT 20 7.030671E-4 45.0 34 ACCATTC 20 7.030671E-4 45.0 29 TCCGATG 20 7.030671E-4 45.0 30 ACGTTAT 25 3.8886377E-5 45.0 44 CGTGCGG 35 1.2106648E-7 45.0 2 >>END_MODULE