##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935121.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1493191 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.153964897993625 33.0 31.0 34.0 30.0 34.0 2 32.47758324286712 34.0 31.0 34.0 30.0 34.0 3 32.52963753464895 34.0 31.0 34.0 31.0 34.0 4 35.99580093906272 37.0 35.0 37.0 35.0 37.0 5 30.502752829343333 37.0 35.0 37.0 0.0 37.0 6 32.96794248023193 37.0 35.0 37.0 17.0 37.0 7 35.105979744051496 37.0 35.0 37.0 32.0 37.0 8 35.609750527561445 37.0 35.0 37.0 35.0 37.0 9 37.49996885863898 39.0 37.0 39.0 35.0 39.0 10 37.47199788908452 39.0 37.0 39.0 35.0 39.0 11 37.37644212964048 39.0 37.0 39.0 35.0 39.0 12 37.23719805436813 39.0 37.0 39.0 34.0 39.0 13 37.200593895891416 39.0 37.0 39.0 34.0 39.0 14 38.456497527777756 40.0 38.0 41.0 34.0 41.0 15 38.52788156371154 40.0 38.0 41.0 34.0 41.0 16 38.60490720878977 40.0 38.0 41.0 35.0 41.0 17 38.55202850807432 40.0 38.0 41.0 34.0 41.0 18 38.5329251247831 40.0 38.0 41.0 34.0 41.0 19 38.51673161705368 40.0 38.0 41.0 34.0 41.0 20 38.39284391615004 40.0 37.0 41.0 34.0 41.0 21 38.37230334230517 40.0 37.0 41.0 34.0 41.0 22 38.37577175324523 40.0 37.0 41.0 34.0 41.0 23 38.27839305219493 40.0 37.0 41.0 34.0 41.0 24 38.271389929352644 40.0 37.0 41.0 34.0 41.0 25 38.22699641238127 40.0 37.0 41.0 34.0 41.0 26 38.14197848768175 40.0 37.0 41.0 34.0 41.0 27 38.06352368853013 40.0 37.0 41.0 34.0 41.0 28 38.009957868752224 40.0 37.0 41.0 34.0 41.0 29 37.98624154579019 40.0 36.0 41.0 34.0 41.0 30 37.86939581071678 40.0 36.0 41.0 33.0 41.0 31 33.323808541573044 39.0 34.0 41.0 9.0 41.0 32 34.205768049767244 39.0 33.0 41.0 16.0 41.0 33 36.13373573775893 39.0 34.0 41.0 30.0 41.0 34 36.92960779967198 39.0 35.0 41.0 31.0 41.0 35 37.10353397522487 39.0 35.0 41.0 32.0 41.0 36 37.27828589912476 39.0 35.0 41.0 32.0 41.0 37 37.35276331025301 40.0 35.0 41.0 33.0 41.0 38 37.326851019059184 40.0 35.0 41.0 33.0 41.0 39 37.347028611878855 40.0 35.0 41.0 33.0 41.0 40 37.298626230669754 40.0 35.0 41.0 32.0 41.0 41 37.21469791875252 39.0 35.0 41.0 32.0 41.0 42 37.13569730864973 39.0 35.0 41.0 32.0 41.0 43 37.11505560909489 39.0 35.0 41.0 32.0 41.0 44 37.07133246851876 39.0 35.0 41.0 32.0 41.0 45 37.02156187654493 39.0 35.0 41.0 32.0 41.0 46 36.9620892437739 39.0 35.0 41.0 32.0 41.0 47 36.83253448487166 39.0 35.0 41.0 32.0 41.0 48 36.81663765720528 39.0 35.0 41.0 32.0 41.0 49 36.77175324523119 39.0 35.0 41.0 32.0 41.0 50 36.55124896948883 39.0 35.0 41.0 31.0 41.0 51 35.927580597525704 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 14.0 10 17.0 11 19.0 12 15.0 13 26.0 14 37.0 15 50.0 16 79.0 17 136.0 18 236.0 19 467.0 20 971.0 21 1695.0 22 2704.0 23 3929.0 24 5505.0 25 7140.0 26 8449.0 27 10170.0 28 12504.0 29 15662.0 30 20524.0 31 29243.0 32 45810.0 33 52143.0 34 94373.0 35 141603.0 36 167519.0 37 176903.0 38 251821.0 39 442838.0 40 589.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.71236432579623 21.081964731906368 23.189531680809754 11.016139261487647 2 31.488336053458667 25.64152877964038 24.107297726814586 18.762837440086365 3 32.78535699719593 25.599873023611845 24.184983702687735 17.42978627650448 4 28.315600616398033 24.701863324919586 27.057690543272763 19.92484551540962 5 24.084996494085487 39.25063839790087 18.995895367705806 17.668469740307838 6 27.186943934165154 35.261396566145926 21.75073383110399 15.80092566858493 7 79.19395442378102 6.425299911397805 9.108412788451043 5.272332876370136 8 79.73186283603371 7.264174509490079 7.496093935738965 5.507868718737255 9 74.02308211072797 7.735781959575165 9.340734038713066 8.900401890983806 10 41.71093985966966 25.904656537576237 16.751440371660422 15.632963231093678 11 31.380379335262536 26.071279561690368 22.941070499353398 19.6072706036937 12 28.97686900068377 22.55846706817815 26.304404459978663 22.160259471159417 13 25.95327724316581 23.853478891849736 28.348483214806414 21.844760650178042 14 20.997916542491886 27.993538669868755 27.960522130122673 23.048022657516686 15 20.92873584156347 26.425353487932888 31.425986360753583 21.21992430975006 16 23.401694759746075 25.97156023576354 28.723719872407482 21.903025132082902 17 22.351125877399475 26.847536584402132 27.581535115065652 23.21980242313274 18 22.916492263883185 26.415106975597897 27.77039240124003 22.898008359278887 19 24.017824913222753 28.12835062627621 25.80868756910536 22.045136891395675 20 26.576305375534677 27.336422467052106 26.47752363897184 19.60974851844138 21 25.287320912060146 27.866964105730613 26.33936314912158 20.506351833087663 22 23.113118147644876 24.972290885760764 27.875335439337633 24.039255527256728 23 23.73601233867603 26.721497785614833 27.561243002402236 21.981246873306898 24 23.804322420909315 25.602417909028386 27.17776895253186 23.415490717530442 25 22.786033400951386 27.9684246690477 25.486826534582647 23.75871539541827 26 21.40777703589159 28.29517456239691 26.839031309457397 23.458017092254106 27 23.03248546234206 28.728206907220844 25.9977457672863 22.241561863150796 28 20.196344606952493 29.19365305577116 27.481547906463405 23.128454430812937 29 21.858891461306694 28.00398609421032 26.4390824750484 23.698039969434586 30 22.436714392197647 29.137531635269703 26.2852508486858 22.140503123846848 31 24.757114126725916 29.18360745544274 22.93055610434298 23.12872231348836 32 23.933107017119713 29.256873367171384 24.133483258337346 22.676536357371564 33 24.84169808149125 27.76972269455147 23.985946874847222 23.40263234911006 34 21.82681251092459 29.278036098529924 25.807281185059377 23.0878702054861 35 21.886684288881998 27.982086685494355 25.184052140683942 24.947176884939704 36 22.521030464287556 31.264854931485658 24.02492380412151 22.189190800105276 37 21.833576548479066 30.876625964126493 25.465128037873253 21.824669449521195 38 22.56911540452628 28.833417827993873 24.266286094679113 24.331180672800734 39 23.967931764924916 26.484019793850887 25.516226658210506 24.031821783013694 40 23.603678297016256 25.46773989395864 27.38048916715946 23.548092641865644 41 20.737333669972564 27.927036795694587 25.95542030456921 25.38020922976364 42 21.83592052188903 27.35008448349876 25.895079731929805 24.918915262682404 43 23.048558422867536 27.019986056706745 25.775068293339565 24.156387227086153 44 22.488951513905455 26.663702098391965 25.755311946027 25.09203444167558 45 22.139632505151717 26.324696572642083 25.433517882173145 26.102153040033055 46 23.082445581308754 27.88357283160694 24.845314497609483 24.188667089474823 47 20.734855755224885 27.753850646032557 28.330200222208678 23.18109337653388 48 21.512720073989193 26.171400711630326 27.571556485406084 24.744322728974392 49 22.077416753784345 25.154451105049517 28.18869119891561 24.57944094225052 50 21.666417759014085 25.601279407657827 27.636116210183424 25.09618662314466 51 20.961953293316128 25.348197250050397 25.868961171075906 27.820888285557576 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 870.0 1 1422.0 2 1974.0 3 2443.0 4 2912.0 5 2425.0 6 1938.0 7 1842.5 8 1747.0 9 1794.0 10 1841.0 11 1979.5 12 2118.0 13 2176.0 14 2234.0 15 2287.0 16 2340.0 17 2616.0 18 2892.0 19 2899.5 20 2907.0 21 3733.5 22 4560.0 23 4718.5 24 4877.0 25 6482.5 26 11202.0 27 14316.0 28 15941.0 29 17566.0 30 20222.5 31 22879.0 32 27018.5 33 31158.0 34 35542.5 35 39927.0 36 43648.5 37 47370.0 38 51091.5 39 54813.0 40 59803.5 41 64794.0 42 71374.0 43 77954.0 44 87640.5 45 97327.0 46 114434.0 47 131541.0 48 134585.0 49 137629.0 50 136635.5 51 135642.0 52 122050.0 53 108458.0 54 98759.0 55 89060.0 56 82961.5 57 76863.0 58 73998.0 59 71133.0 60 69790.5 61 68448.0 62 62696.5 63 56945.0 64 47921.0 65 38897.0 66 31553.5 67 24210.0 68 20024.0 69 15838.0 70 13340.0 71 10842.0 72 8931.5 73 7021.0 74 5942.5 75 3891.0 76 2918.0 77 2396.5 78 1875.0 79 1373.0 80 871.0 81 648.0 82 425.0 83 306.0 84 187.0 85 133.0 86 79.0 87 44.5 88 10.0 89 21.0 90 32.0 91 16.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1493191.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.69679428233706 #Duplication Level Percentage of deduplicated Percentage of total 1 71.39872658868033 17.633196625814673 2 12.107459990706026 5.980308973441866 3 4.480840268734547 3.3198717098684702 4 2.2018129123989008 2.1751088218283634 5 1.184271343750703 1.462385287553899 6 0.7651659254517117 1.1338287271640985 7 0.5372854270800792 0.9288459364446028 8 0.38647474454535596 0.7635749809084338 9 0.29807414535368104 0.6625328263814966 >10 4.845045898264779 32.58699919809918 >50 1.706890766797228 26.91636663233391 >100 0.0796196946144257 3.3418824898297514 >500 0.004937655479873614 0.8097861123435077 >1k 0.002777431207428908 1.466227315695473 >5k 6.172069349842017E-4 0.8190843622922991 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAAACGACGTCGTATGC 5490 0.3676689720203242 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAAACGACGTCGTATGCCG 5257 0.3520648061768387 No Hit GCTGTCTCTTATACACATCTGACGCAAACGACGTCGTATGCCGTCTTCTGC 3631 0.24317049861672085 No Hit GAATCTGTCTCTTATACACATCTGACGCAAACGACGTCGTATGCCGTCTTC 3036 0.203322950647305 No Hit CTGTCTCTTATACACATCTGACGCAAACGACGTCGTATGCCGTCTTCTGCT 3004 0.20117988924390784 No Hit CCTGTCTCTTATACACATCTGACGCAAACGACGTCGTATGCCGTCTTCTGC 2286 0.1530949490051842 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAAACGACGT 1970 0.1319322176466373 No Hit AGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGC 1631 0.10922916090439869 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 1514 0.10139359264822786 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.697066885616107E-5 0.0 0.0 0.2141721990020031 0.0 2 6.697066885616107E-5 0.0 0.0 0.7648720090062155 0.0 3 6.697066885616107E-5 0.0 0.0 1.0852596888140902 0.0 4 6.697066885616107E-5 0.0 0.0 1.476971130953776 0.0 5 6.697066885616107E-5 0.0 0.0 2.623241099095829 0.0 6 6.697066885616107E-5 0.0 0.0 3.3070116281172335 0.0 7 1.3394133771232213E-4 0.0 0.0 3.9035863462879163 0.0 8 1.3394133771232213E-4 0.0 0.0 4.823763336371569 0.0 9 1.3394133771232213E-4 0.0 0.0 5.1426106907957525 0.0 10 2.009120065684832E-4 0.0 0.0 6.252783468424334 0.0 11 2.009120065684832E-4 0.0 0.0 7.363692923410334 0.0 12 2.009120065684832E-4 0.0 0.0 8.668616406072632 0.0 13 2.009120065684832E-4 0.0 0.0 9.072985304626133 0.0 14 2.009120065684832E-4 0.0 0.0 9.266262654945013 0.0 15 2.6788267542464427E-4 0.0 0.0 9.665541782665446 0.0 16 2.6788267542464427E-4 0.0 0.0 10.309330822379723 0.0 17 2.6788267542464427E-4 0.0 0.0 11.039311112911879 0.0 18 3.3485334428080534E-4 0.0 0.0 11.748329584092055 0.0 19 3.3485334428080534E-4 0.0 0.0 12.425135163552419 0.0 20 3.3485334428080534E-4 0.0 0.0 12.873838644888698 0.0 21 3.3485334428080534E-4 0.0 0.0 13.396343803304466 0.0 22 3.3485334428080534E-4 0.0 0.0 13.975171294228266 0.0 23 3.3485334428080534E-4 0.0 0.0 14.514419119858076 0.0 24 3.3485334428080534E-4 0.0 0.0 14.965600515942032 0.0 25 4.018240131369664E-4 0.0 0.0 15.375862833354876 0.0 26 4.018240131369664E-4 0.0 0.0 15.747750957513137 0.0 27 4.018240131369664E-4 0.0 0.0 16.117763902943427 0.0 28 4.018240131369664E-4 0.0 0.0 16.50391677956805 0.0 29 4.018240131369664E-4 0.0 0.0 16.92790808409641 0.0 30 5.357653508492885E-4 0.0 0.0 17.36783840781253 0.0 31 5.357653508492885E-4 0.0 0.0 17.772676101048024 0.0 32 6.027360197054496E-4 0.0 0.0 18.23939469230661 0.0 33 6.027360197054496E-4 0.0 0.0 18.680731400068712 0.0 34 6.027360197054496E-4 0.0 0.0 19.12528269993591 0.0 35 6.027360197054496E-4 0.0 0.0 19.567222143717714 0.0 36 6.027360197054496E-4 0.0 0.0 20.02751155076611 0.0 37 6.027360197054496E-4 0.0 0.0 20.51184342793387 0.0 38 6.027360197054496E-4 0.0 0.0 20.96148449863413 0.0 39 6.027360197054496E-4 0.0 0.0 21.432020418017522 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTAATCG 30 2.1659398E-6 45.000004 1 TAACCGT 20 7.0339645E-4 45.000004 27 TCCGTTA 20 7.0339645E-4 45.000004 45 ATACGAG 20 7.0339645E-4 45.000004 1 GTCGAAA 25 3.8913684E-5 45.0 25 GCCGATT 45 3.8562575E-10 45.0 9 TCTAGCG 60 3.6379788E-12 41.250004 1 TACGGCT 880 0.0 40.909092 7 TTACGCG 55 6.184564E-11 40.909092 1 TACGTAG 50 1.0822987E-9 40.5 1 GTACGAG 95 0.0 40.263157 1 TAATACG 260 0.0 39.80769 4 CCGTCGA 40 3.459154E-7 39.375004 41 CGATGAA 705 0.0 38.936172 19 TTACGGG 395 0.0 38.734177 3 CGTAAGG 250 0.0 38.7 2 AGATCGT 35 6.2495437E-6 38.57143 13 GGCGATA 340 0.0 38.38235 8 TACGGGA 540 0.0 37.916664 4 CTACGGG 395 0.0 37.594936 3 >>END_MODULE