##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935120.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 474068 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.835544689791337 33.0 31.0 34.0 30.0 34.0 2 32.15965009239181 34.0 31.0 34.0 30.0 34.0 3 32.2154374477923 34.0 31.0 34.0 30.0 34.0 4 35.758566281630486 37.0 35.0 37.0 35.0 37.0 5 30.27429187373963 37.0 35.0 37.0 0.0 37.0 6 32.751672755807185 37.0 35.0 37.0 17.0 37.0 7 34.923055342271574 37.0 35.0 37.0 32.0 37.0 8 35.46572010766388 37.0 35.0 37.0 33.0 37.0 9 37.26995705257474 39.0 37.0 39.0 34.0 39.0 10 37.28970738375085 39.0 37.0 39.0 34.0 39.0 11 37.19494460710278 39.0 37.0 39.0 34.0 39.0 12 36.94676923985588 39.0 35.0 39.0 33.0 39.0 13 36.81720976737515 39.0 35.0 39.0 33.0 39.0 14 37.896917741758564 40.0 37.0 41.0 33.0 41.0 15 38.05297763190091 40.0 37.0 41.0 33.0 41.0 16 38.14811377270771 40.0 37.0 41.0 34.0 41.0 17 38.11947020258697 40.0 36.0 41.0 34.0 41.0 18 38.03286659297822 40.0 36.0 41.0 34.0 41.0 19 37.99662284735523 40.0 36.0 41.0 34.0 41.0 20 37.919228886995114 40.0 36.0 41.0 34.0 41.0 21 37.85951593442291 40.0 36.0 41.0 33.0 41.0 22 37.83436342465638 39.0 35.0 41.0 33.0 41.0 23 37.753689344144725 39.0 35.0 41.0 33.0 41.0 24 37.76056599475181 39.0 35.0 41.0 33.0 41.0 25 37.69005290380283 39.0 35.0 41.0 33.0 41.0 26 37.62254360133989 39.0 35.0 41.0 33.0 41.0 27 37.58852949365914 39.0 35.0 41.0 33.0 41.0 28 37.50937207320469 39.0 35.0 41.0 33.0 41.0 29 37.461319895036155 39.0 35.0 41.0 33.0 41.0 30 37.310155926997815 39.0 35.0 41.0 33.0 41.0 31 32.752157918273326 38.0 33.0 40.0 9.0 41.0 32 33.47851574035792 38.0 32.0 40.0 16.0 41.0 33 35.37633208737987 38.0 33.0 40.0 27.0 41.0 34 36.27732519385405 38.0 35.0 40.0 30.0 41.0 35 36.39322417880979 38.0 35.0 40.0 31.0 41.0 36 36.56353729844663 39.0 35.0 40.0 31.0 41.0 37 36.59777711214425 39.0 35.0 40.0 31.0 41.0 38 36.479091607111215 39.0 35.0 40.0 31.0 41.0 39 36.489022671852986 39.0 35.0 40.0 31.0 41.0 40 36.52117417754415 39.0 35.0 40.0 31.0 41.0 41 36.470057038230806 39.0 35.0 41.0 31.0 41.0 42 36.35602909287275 39.0 35.0 41.0 31.0 41.0 43 36.289776994017735 39.0 35.0 40.0 31.0 41.0 44 36.194877106237925 39.0 35.0 40.0 31.0 41.0 45 36.16028713180388 39.0 35.0 40.0 30.0 41.0 46 36.113627158972974 39.0 35.0 40.0 30.0 41.0 47 36.00627125222542 38.0 35.0 40.0 30.0 41.0 48 36.010631386214634 38.0 35.0 40.0 30.0 41.0 49 35.965513386265265 38.0 35.0 40.0 30.0 41.0 50 35.75943113646144 38.0 35.0 40.0 29.0 41.0 51 35.12727920888987 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 4.0 11 3.0 12 6.0 13 7.0 14 10.0 15 23.0 16 28.0 17 102.0 18 165.0 19 315.0 20 491.0 21 797.0 22 1345.0 23 1996.0 24 2849.0 25 3315.0 26 3722.0 27 4266.0 28 5319.0 29 6431.0 30 8138.0 31 11415.0 32 17839.0 33 19812.0 34 36278.0 35 52861.0 36 53302.0 37 53660.0 38 82323.0 39 107152.0 40 92.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.70161242690922 22.900301222609414 23.038467055359146 12.359619295122219 2 31.531974315920923 25.19132276382291 24.413586236573657 18.86311668368251 3 31.331370183180475 25.9150585991883 25.94226988533291 16.81130133229832 4 27.40450737025068 26.621708278137312 26.321751309938655 19.65203304167335 5 22.129947602453655 39.016132706700304 21.421188521477934 17.432731169368108 6 25.191744644228255 33.828691242606546 24.297569125104417 16.681994988060783 7 74.18387235586455 8.354075786596017 10.816591712581317 6.645460144958107 8 72.52187449901702 8.10896327109191 10.92670249837576 8.44245973151531 9 66.86952082823561 9.831079085700784 13.55185332062067 9.747546765442932 10 38.102550688930705 24.78821603651797 21.06048077490993 16.048752499641402 11 29.509901533113393 25.633453428622055 24.337225883206628 20.519419155057925 12 26.399166364319044 23.62192765594809 30.607634347815083 19.371271631917782 13 22.509850907464752 27.568196967523644 30.55996186201136 19.361990263000244 14 16.365162803648424 32.75795877384679 29.15615481323354 21.720723609271246 15 16.22530944927732 27.72598023912181 36.27496477298615 19.773745538614715 16 18.038551431440215 28.21367398769797 32.15656825603078 21.591206324831035 17 17.25174447547609 27.865622653290245 27.490992853345936 27.39164001788773 18 18.656184344861916 29.137381135195795 30.14187838031675 22.064556139625537 19 20.18507893382384 29.88368757224702 27.694339208721114 22.236894285208027 20 23.39158095463098 29.54090974290608 28.030788831981912 19.03672047048103 21 21.376891078916948 29.011238893998332 29.28799243990314 20.323877587181585 22 18.513377827653414 28.018765240429644 27.417796603018974 26.050060328897963 23 18.816498898892142 27.99513993773045 28.3923403393606 24.796020824016807 24 21.878506880869413 26.57593425415763 27.64413544048533 23.901423424487625 25 19.16391741269185 29.57951179999494 25.283714572592963 25.972856214720252 26 18.05310630542454 30.34121687184117 26.285258654876515 25.320418167857778 27 23.412885915100787 27.80212965228617 26.0652480234903 22.719736409122742 28 19.27086409544622 27.569040728334333 28.22780698127695 24.932288194942497 29 20.085726098365637 24.78737227570728 29.39683758448155 25.730064041445534 30 23.299821966468944 25.657078731321242 28.474607018402427 22.568492283807387 31 27.599416117519006 27.334264282761122 24.142528076140977 20.923791523578895 32 24.8527637385354 26.333985841693597 27.288912139186785 21.52433828058422 33 24.073761570070115 25.068555565868188 29.957727583384663 20.899955280677034 34 21.41781347823519 23.002818161107687 32.322156315127785 23.257212045529332 35 23.230844520195415 22.812550098298136 29.482268366563446 24.474337014943004 36 24.971523072639368 22.803268729380598 31.233282988938292 20.99192520904174 37 24.507032746357062 24.044229941696127 32.323421956343815 19.125315355602993 38 22.676493667575116 25.585991883021002 29.58330872364302 22.15420572576086 39 23.12959322291317 22.09303306698617 33.872144924356846 20.90522878574382 40 23.69554578668039 22.336879941274248 32.71429415189382 21.253280120151537 41 21.563995038686436 23.2331648624248 29.276812609161556 25.92602748972721 42 24.826607153404154 21.72789557616207 29.470244775011178 23.9752524954226 43 25.559835297889755 21.307280812035405 29.54407384594615 23.588810044128692 44 21.971109629842132 22.112439565631934 29.737295071593106 26.17915573293283 45 21.777677463992507 21.52265075896285 30.117831197212215 26.581840579832427 46 23.90374376671701 22.262418049731263 31.896478986137012 21.937359197414715 47 20.5004345368175 21.520752297138806 34.31511934996667 23.663693816077018 48 20.98243289992153 19.620181071069972 33.367786899769655 26.029599129238846 49 22.015407072403114 18.524557658395 35.710277850434956 23.74975741876693 50 20.190352438890624 19.548250461959043 34.445691335420236 25.815705763730097 51 20.48461402161715 20.262704928406894 29.79445986651704 29.458221183458917 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1483.0 1 1516.0 2 1549.0 3 1526.0 4 1503.0 5 1336.0 6 1169.0 7 1189.5 8 1210.0 9 1345.0 10 1480.0 11 1668.0 12 1856.0 13 2131.5 14 2407.0 15 2311.5 16 2216.0 17 2113.0 18 2010.0 19 1907.5 20 1805.0 21 1821.5 22 1838.0 23 1896.5 24 1955.0 25 2329.0 26 3292.0 27 3881.0 28 4226.0 29 4571.0 30 5686.0 31 6801.0 32 7560.0 33 8319.0 34 8511.0 35 8703.0 36 9830.0 37 10957.0 38 11583.5 39 12210.0 40 15220.0 41 18230.0 42 22664.0 43 27098.0 44 30667.5 45 34237.0 46 41836.0 47 49435.0 48 54942.0 49 60449.0 50 59822.0 51 59195.0 52 48484.5 53 37774.0 54 32101.5 55 26429.0 56 22800.5 57 19172.0 58 17419.5 59 15667.0 60 14917.0 61 14167.0 62 12411.0 63 10655.0 64 8895.0 65 7135.0 66 5659.5 67 4184.0 68 3558.5 69 2933.0 70 2646.5 71 2360.0 72 2203.0 73 2046.0 74 1599.0 75 851.5 76 551.0 77 415.5 78 280.0 79 249.0 80 218.0 81 141.0 82 64.0 83 37.0 84 10.0 85 5.5 86 1.0 87 0.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 474068.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.422961170059352 #Duplication Level Percentage of deduplicated Percentage of total 1 70.96197325751304 21.588733569641093 2 11.94143767171622 7.265877892026132 3 5.15614252668711 4.705953716300812 4 2.796728332547239 3.40339029857158 5 1.7505133153203332 2.6627899309831182 6 1.1730803902351492 2.141314749688921 7 0.7642052965131368 1.6274571643241 8 0.5558160816734009 1.3527656856355532 9 0.42564036357466434 1.1654316228097765 >10 3.3927842528109515 24.626877310091512 >50 0.9530712998612323 19.467807539843246 >100 0.11712442480222372 5.739429472214676 >500 0.008420710279898437 1.7147954554421627 >1k 0.003062076465417614 2.537375592427321 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCTGCT 3554 0.7496814802939663 Illumina Single End Adapter 1 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCTGC 3234 0.6821806154391353 No Hit CCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCTGC 2916 0.6151016309896471 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1191 0.2512297813815739 No Hit TCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCTGC 996 0.21009644186066131 No Hit ACTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCTGC 917 0.19343216584962494 No Hit AAAACTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTC 825 0.17402566720386103 No Hit GCCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCTG 703 0.14829096247795673 No Hit CGCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCTG 655 0.13816583274973213 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCC 613 0.12930634423753554 No Hit GGCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCTG 559 0.11791557329328282 No Hit ACCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCTG 538 0.11348582903718454 No Hit CGTTCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTC 537 0.11327488883451318 No Hit AGCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCTG 514 0.10842326417307223 No Hit TGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCTGCTT 506 0.10673574255170146 Illumina Single End Adapter 1 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.1094020267134673E-4 0.0 0.0 0.786596015761452 0.0 2 2.1094020267134673E-4 0.0 0.0 2.574103293198444 0.0 3 2.1094020267134673E-4 0.0 0.0 3.5659441261591165 0.0 4 2.1094020267134673E-4 0.0 0.0 4.639207877350929 0.0 5 2.1094020267134673E-4 0.0 0.0 7.476142663077871 0.0 6 2.1094020267134673E-4 0.0 0.0 9.217243095927167 0.0 7 2.1094020267134673E-4 0.0 0.0 10.639191002134714 0.0 8 2.1094020267134673E-4 0.0 0.0 12.86735236295215 0.0 9 2.1094020267134673E-4 0.0 0.0 13.646776411822776 0.0 10 2.1094020267134673E-4 0.0 0.0 15.37332197068775 0.0 11 2.1094020267134673E-4 0.0 0.0 18.026105959482607 0.0 12 2.1094020267134673E-4 0.0 0.0 19.92541154433541 0.0 13 2.1094020267134673E-4 0.0 0.0 20.792164837111976 0.0 14 2.1094020267134673E-4 0.0 0.0 21.13895053030367 0.0 15 2.1094020267134673E-4 0.0 0.0 21.798771484259643 0.0 16 2.1094020267134673E-4 0.0 0.0 22.972231831720343 0.0 17 2.1094020267134673E-4 0.0 0.0 24.376249820700828 0.0 18 2.1094020267134673E-4 0.0 0.0 26.023481863361376 0.0 19 2.1094020267134673E-4 0.0 0.0 26.9817832040973 0.0 20 2.1094020267134673E-4 0.0 0.0 27.82216897153995 0.0 21 2.1094020267134673E-4 0.0 0.0 28.653062429862384 0.0 22 2.1094020267134673E-4 0.0 0.0 29.562214703375886 0.0 23 2.1094020267134673E-4 0.0 0.0 30.363787473527005 0.0 24 2.1094020267134673E-4 0.0 0.0 31.045124328155456 0.0 25 2.1094020267134673E-4 0.0 0.0 31.60981125070665 0.0 26 2.1094020267134673E-4 0.0 0.0 32.16099800028688 0.0 27 2.1094020267134673E-4 0.0 0.0 32.641097901566866 0.0 28 2.1094020267134673E-4 0.0 0.0 33.170979690677285 0.0 29 2.1094020267134673E-4 0.0 0.0 33.72828370613499 0.0 30 4.2188040534269346E-4 0.0 0.0 34.35709645029827 0.0 31 4.2188040534269346E-4 0.0 0.0 34.907861319473156 0.0 32 4.2188040534269346E-4 0.0 0.0 35.48478277377929 0.0 33 4.2188040534269346E-4 0.0 0.0 36.02711003484732 0.0 34 6.328206080140401E-4 0.0 0.0 36.597914223275986 0.0 35 6.328206080140401E-4 0.0 0.0 37.1963515782546 0.0 36 6.328206080140401E-4 0.0 0.0 37.77833559742484 0.0 37 8.437608106853869E-4 0.0 0.0 38.37002286591797 0.0 38 8.437608106853869E-4 0.0 0.0 38.97162432393665 0.0 39 8.437608106853869E-4 0.0 0.0 39.59199945999308 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTGTTCG 35 1.2099008E-7 45.000004 31 ACGCCGT 35 1.2099008E-7 45.000004 25 GGTCGAG 30 2.162793E-6 45.000004 1 TCTTACG 30 2.162793E-6 45.000004 28 GCTCTAG 30 2.162793E-6 45.000004 1 TACGCCG 30 2.162793E-6 45.000004 31 TACGCAT 35 1.2099008E-7 45.000004 28 GTTGTAA 30 2.162793E-6 45.000004 29 CTAGTAG 35 1.2099008E-7 45.000004 1 TTAAGCG 35 1.2099008E-7 45.000004 1 TTGCGAC 30 2.162793E-6 45.000004 27 TTTGCGA 30 2.162793E-6 45.000004 26 CGATGCA 30 2.162793E-6 45.000004 10 CCGGTAT 35 1.2099008E-7 45.000004 26 TAGGATC 30 2.162793E-6 45.000004 34 TTGCACG 35 1.2099008E-7 45.000004 1 ATACGCA 35 1.2099008E-7 45.000004 27 TATACGC 35 1.2099008E-7 45.000004 26 GACCTGC 35 1.2099008E-7 45.000004 16 CCGTTGT 35 1.2099008E-7 45.000004 38 >>END_MODULE