##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935119.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 791286 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.865627598617944 33.0 31.0 34.0 30.0 34.0 2 32.19688835642233 34.0 31.0 34.0 30.0 34.0 3 32.26605550963874 34.0 31.0 34.0 30.0 34.0 4 35.80108582737468 37.0 35.0 37.0 35.0 37.0 5 30.290700201949736 37.0 35.0 37.0 0.0 37.0 6 32.73761067426948 37.0 35.0 37.0 17.0 37.0 7 34.96636614321497 37.0 35.0 37.0 32.0 37.0 8 35.57587774837417 37.0 35.0 37.0 35.0 37.0 9 37.44713289505943 39.0 37.0 39.0 35.0 39.0 10 37.3477124579482 39.0 37.0 39.0 34.0 39.0 11 37.12075406363818 39.0 37.0 39.0 34.0 39.0 12 36.6781972636948 39.0 35.0 39.0 33.0 39.0 13 36.40794857990663 39.0 35.0 39.0 33.0 39.0 14 36.75161319674555 39.0 35.0 41.0 27.0 41.0 15 37.118999957031974 40.0 35.0 41.0 31.0 41.0 16 37.50704928432956 40.0 35.0 41.0 33.0 41.0 17 37.65917632815442 40.0 35.0 41.0 33.0 41.0 18 37.67015845092672 39.0 35.0 41.0 33.0 41.0 19 37.64718698422568 39.0 35.0 41.0 33.0 41.0 20 37.48066185930245 39.0 35.0 41.0 33.0 41.0 21 37.470679375093205 39.0 35.0 41.0 33.0 41.0 22 37.565565421352076 39.0 35.0 41.0 33.0 41.0 23 37.5465369032183 39.0 35.0 41.0 33.0 41.0 24 37.5043220782372 39.0 35.0 41.0 33.0 41.0 25 37.40596320420177 39.0 35.0 41.0 33.0 41.0 26 37.33760486094788 39.0 35.0 41.0 33.0 41.0 27 37.315739189117465 39.0 35.0 41.0 33.0 41.0 28 37.279547470825975 39.0 35.0 41.0 33.0 41.0 29 37.24175456156181 39.0 35.0 41.0 33.0 41.0 30 37.092585992927965 39.0 35.0 41.0 32.0 41.0 31 32.493863154409404 37.0 32.0 40.0 9.0 41.0 32 33.36083034452777 37.0 32.0 40.0 16.0 41.0 33 35.259525632956986 37.0 33.0 40.0 27.0 41.0 34 36.02389275179897 38.0 34.0 40.0 30.0 41.0 35 36.23921186524215 38.0 35.0 40.0 30.0 41.0 36 36.3877889915909 38.0 35.0 40.0 31.0 41.0 37 36.465860636988396 39.0 35.0 40.0 31.0 41.0 38 36.441027643608 39.0 35.0 40.0 31.0 41.0 39 36.42723111491926 38.0 35.0 40.0 31.0 41.0 40 36.33270524184682 38.0 35.0 40.0 31.0 41.0 41 36.1918067550797 38.0 35.0 40.0 30.0 41.0 42 36.22931026202915 38.0 35.0 40.0 30.0 41.0 43 36.25415715683078 38.0 35.0 40.0 31.0 41.0 44 36.22988527536188 38.0 35.0 40.0 31.0 41.0 45 36.26275708151035 38.0 35.0 40.0 31.0 41.0 46 36.28290529593598 38.0 35.0 40.0 31.0 41.0 47 36.15178582712193 38.0 35.0 40.0 31.0 41.0 48 36.096641416630646 38.0 35.0 40.0 31.0 41.0 49 36.08455729028442 38.0 35.0 40.0 31.0 41.0 50 35.875934870577765 38.0 35.0 40.0 30.0 41.0 51 35.20858071544296 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 4.0 11 5.0 12 9.0 13 13.0 14 22.0 15 34.0 16 80.0 17 145.0 18 283.0 19 467.0 20 794.0 21 1290.0 22 2031.0 23 3049.0 24 4067.0 25 5321.0 26 6360.0 27 7575.0 28 9419.0 29 11955.0 30 16368.0 31 24591.0 32 33060.0 33 41155.0 34 78996.0 35 73340.0 36 82766.0 37 82203.0 38 125952.0 39 179802.0 40 127.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.53883677962204 22.42880576681503 25.021168073237742 11.011189380325192 2 34.057344626342434 24.16117560528052 25.183941078194234 16.597538690182816 3 33.93804515687122 23.063847963947296 25.70132670109164 17.296780178089843 4 30.48088807333884 25.417105825201002 25.22539258877321 18.876613512686944 5 22.865563146574058 37.95176459586041 22.62860710286799 16.554065154697543 6 27.79121581830084 30.72087715440435 26.696036578430554 14.791870448864252 7 77.88157505630076 6.5787844091769605 9.82249148853891 5.717149045983374 8 78.25110010792558 5.493462540724845 9.83651928632631 6.418918065023266 9 72.964768743539 7.175660886202966 12.336753082956099 7.522817287301936 10 47.1486921290153 19.324997535657147 19.54426086143316 13.982049473894396 11 36.217246355931984 23.858630128676612 22.51385718943593 17.41026632595547 12 33.050123469895844 20.374428462022582 29.129922682822645 17.445525385258932 13 30.548625907699616 21.516746157520792 31.43819048991136 16.496437444868228 14 20.483365053849052 24.80670705661417 36.675108620650434 18.034819268886345 15 18.94953278587009 26.032306902940277 37.66754371996977 17.35061659121986 16 28.744095055390844 25.28390493449903 27.182586321507014 18.78941368860311 17 27.29708348182579 24.11125686540644 25.230194897925657 23.361464754842117 18 27.544402403176598 23.535864403009786 29.584120027398438 19.33561316641518 19 26.163485768735956 26.142886390003106 26.75568631316616 20.937941528094772 20 21.61329784679623 33.86613689614122 26.15261738486464 18.367947872197917 21 21.957168457422473 26.019416494162666 34.69921115753343 17.324203890881424 22 19.260924621439024 23.31167239152468 34.92997474996398 22.49742823707231 23 19.814706692649686 24.602608917635344 33.846927659531445 21.735756730183525 24 22.964768743539 29.115389378808676 26.066175820120662 21.853666057531665 25 24.805696044161024 26.170057349681404 25.59163184992531 23.432614756232258 26 18.110518826315644 26.486883377186 26.465778492226576 28.936819304271783 27 20.49739285163645 24.493166819582303 32.10975551191352 22.899684816867733 28 18.827200279039438 25.72799215454336 26.374408241773516 29.07039932464368 29 21.900551760046305 27.515714924818585 26.24841081480021 24.335322500334897 30 25.35063175640666 23.051589437952902 29.69229835988505 21.90548044575539 31 24.973397734826598 24.484067707503986 28.59825650902455 21.944278048644865 32 27.973324436423745 23.472802501244807 26.09410503913882 22.459768023192623 33 27.343084548443926 21.3428520155797 29.20347383878901 22.110589597187364 34 19.382246115816532 22.14749155172719 34.77478433840609 23.695477994050194 35 21.198150858223197 26.34433062129243 29.196017621947057 23.261500898537317 36 26.88825532108492 22.981955955242476 28.158466091906085 21.971322631766515 37 21.605715253397634 25.983020045849415 29.594482905043186 22.81678179570977 38 24.977189031525896 22.620519003242823 28.285221778219256 24.11707018701203 39 23.770545668696275 21.03171293312405 28.727286973357298 26.470454424822375 40 25.167891255500543 20.176143644649343 32.63333358608645 22.02263151376367 41 20.10486726670256 21.225700947571422 29.807553779543678 28.86187800618234 42 21.445975285800582 20.939584423331134 32.903905793859614 24.71053449700867 43 21.98850984347 21.49437750699494 32.26077549710219 24.256337152432874 44 23.6934559691439 20.417522867837924 28.7804915037041 27.10852965931408 45 20.711221985476804 19.841498522658053 27.472873272116527 31.974406219748612 46 21.753070318443648 19.819635378358775 31.281483559673745 27.145810743523835 47 18.368832508094417 22.14016171144188 35.31883541475522 24.172170365708478 48 19.57029443210167 25.548411067553324 30.396594910057807 24.484699590287203 49 24.653917799632495 20.562350401751072 31.05703879507536 23.726693003541072 50 20.95841453027098 21.510427329688632 29.738173049946543 27.792985090093847 51 19.860960512381112 22.83245248873353 27.102463584595206 30.20412341429016 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1312.0 1 1493.0 2 1674.0 3 1831.5 4 1989.0 5 1654.0 6 1319.0 7 1371.5 8 1424.0 9 1698.5 10 1973.0 11 2057.5 12 2142.0 13 2404.0 14 2666.0 15 2567.5 16 2469.0 17 2472.0 18 2475.0 19 2537.0 20 2599.0 21 2446.0 22 2293.0 23 2705.5 24 3118.0 25 3467.5 26 4350.5 27 4884.0 28 5665.0 29 6446.0 30 7310.0 31 8174.0 32 9129.5 33 10085.0 34 12306.0 35 14527.0 36 15181.5 37 15836.0 38 18117.5 39 20399.0 40 22831.5 41 25264.0 42 30177.0 43 35090.0 44 40881.0 45 46672.0 46 58303.5 47 69935.0 48 82445.5 49 94956.0 50 94463.5 51 93971.0 52 83625.0 53 73279.0 54 66348.5 55 59418.0 56 55621.0 57 51824.0 58 49425.5 59 47027.0 60 37281.5 61 27536.0 62 22825.0 63 18114.0 64 15669.0 65 13224.0 66 10798.0 67 8372.0 68 6726.0 69 5080.0 70 4159.5 71 3239.0 72 2919.5 73 2600.0 74 2218.5 75 1422.0 76 1007.0 77 853.0 78 699.0 79 501.0 80 303.0 81 210.0 82 117.0 83 65.0 84 13.0 85 10.5 86 8.0 87 32.0 88 56.0 89 36.5 90 17.0 91 12.0 92 7.0 93 3.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 791286.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.389061897593983 #Duplication Level Percentage of deduplicated Percentage of total 1 68.87393791890398 20.241404246297144 2 13.151794858675522 7.730378263321465 3 5.399498272998784 4.760585668833392 4 2.78365523561357 3.272360640840351 5 1.5763198236325944 2.3163280433571374 6 1.0451270429356818 1.8429182013411667 7 0.7281843410879513 1.4980458271164743 8 0.551366075320224 1.2963305372655622 9 0.4307892921414036 1.1394443854407967 >10 4.513741974122772 30.920008255527996 >50 0.8548324088361521 16.118119339917218 >100 0.07953064077538481 4.337254507573323 >500 0.007318770623501671 1.495031424470508 >1k 0.003415426290967446 2.2822674229687903 >5k 4.87918041566778E-4 0.7495232357286923 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 5227 0.660570261574197 No Hit CTGTCTCTTATACACATCTGACGCCTCGTTTGTCGTATGCCGTCTTCTGCT 3886 0.4910992991156169 TruSeq Adapter, Index 27 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCCTCGTTTGTCGTATGCCGTCTTCTGC 3365 0.42525711310449066 TruSeq Adapter, Index 20 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCCTCGTTTGTCGTATGCCGTCTTCTGC 2930 0.3702833109646828 TruSeq Adapter, Index 20 (95% over 21bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 2681 0.3388155483605169 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1031 0.13029422989917677 No Hit TCTGTCTCTTATACACATCTGACGCCTCGTTTGTCGTATGCCGTCTTCTGC 1018 0.12865133466281473 TruSeq Adapter, Index 20 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTCGTTTGTCGTATGCC 1005 0.12700843942645262 No Hit ACTGTCTCTTATACACATCTGACGCCTCGTTTGTCGTATGCCGTCTTCTGC 951 0.12018410536771787 TruSeq Adapter, Index 27 (95% over 22bp) GGGGCTGTCTCTTATACACATCTGACGCCTCGTTTGTCGTATGCCGTCTTC 941 0.11892033980128551 No Hit TGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAG 923 0.11664556178170725 No Hit TGTCTCTTATACACATCTGACGCCTCGTTTGTCGTATGCCGTCTTCTGCTT 851 0.10754644970339422 TruSeq Adapter, Index 20 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.5153635979911183 0.0 2 0.0 0.0 0.0 1.612438486211054 0.0 3 0.0 0.0 0.0 2.248491695796463 0.0 4 0.0 0.0 0.0 3.0435266136390635 0.0 5 0.0 0.0 0.0 5.044446634971426 0.0 6 0.0 0.0 0.0 6.353202255568783 0.0 7 0.0 0.0 0.0 7.4196940170810555 0.0 8 0.0 0.0 0.0 9.027330194139667 0.0 9 0.0 0.0 0.0 9.632547523904126 0.0 10 0.0 0.0 0.0 10.828322502862429 0.0 11 0.0 0.0 0.0 12.916315971721982 0.0 12 0.0 0.0 0.0 14.492989892403 0.0 13 0.0 0.0 0.0 15.19235775686667 0.0 14 0.0 0.0 0.0 15.533068953576835 0.0 15 0.0 0.0 0.0 16.069158306857446 0.0 16 0.0 0.0 0.0 17.012559302199204 0.0 17 1.2637655664323645E-4 0.0 0.0 18.09244697871566 0.0 18 1.2637655664323645E-4 0.0 0.0 19.291760501259976 0.0 19 1.2637655664323645E-4 0.0 0.0 20.08148760372356 0.0 20 1.2637655664323645E-4 0.0 0.0 20.872099342083647 0.0 21 2.527531132864729E-4 0.0 0.0 21.723245451075844 0.0 22 2.527531132864729E-4 0.0 0.0 22.585386320496003 0.0 23 2.527531132864729E-4 0.0 0.0 23.30952399006175 0.0 24 2.527531132864729E-4 0.0 0.0 23.88681210080805 0.0 25 2.527531132864729E-4 0.0 0.0 24.462078186648064 0.0 26 2.527531132864729E-4 0.0 0.0 25.020788943567812 0.0 27 2.527531132864729E-4 0.0 0.0 25.792444198431415 0.0 28 2.527531132864729E-4 0.0 0.0 26.378325915029457 0.0 29 2.527531132864729E-4 0.0 0.0 27.144673354514044 0.0 30 2.527531132864729E-4 0.0 0.0 28.07063438503904 0.0 31 2.527531132864729E-4 0.0 0.0 28.69809398877271 0.0 32 3.791296699297094E-4 0.0 0.0 29.321635919250436 0.0 33 3.791296699297094E-4 0.0 0.0 29.93987003434915 0.0 34 3.791296699297094E-4 0.0 0.0 30.722772802753997 0.0 35 3.791296699297094E-4 0.0 0.0 31.49329066860781 0.0 36 3.791296699297094E-4 0.0 0.0 32.091683664313535 0.0 37 3.791296699297094E-4 0.0 0.0 32.79913962840237 0.0 38 3.791296699297094E-4 0.0 0.0 33.74317250652735 0.0 39 3.791296699297094E-4 0.0 0.0 35.7545817820611 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGACGT 25 3.8896993E-5 45.0 17 TCACCCG 20 7.0319534E-4 45.0 37 CGACGTC 25 3.8896993E-5 45.0 18 CCTCGAG 25 3.8896993E-5 45.0 33 CTACGTA 20 7.0319534E-4 45.0 12 CGCTAAT 25 3.8896993E-5 45.0 25 AATTCGC 20 7.0319534E-4 45.0 18 ACGCTAA 25 3.8896993E-5 45.0 18 TGCTCGA 25 3.8896993E-5 45.0 2 TTAGTCG 20 7.0319534E-4 45.0 29 ACGTACC 20 7.0319534E-4 45.0 14 GCTACGT 20 7.0319534E-4 45.0 11 GGATTCG 20 7.0319534E-4 45.0 9 GACGACT 40 6.8102963E-9 45.0 27 CGCCGCA 20 7.0319534E-4 45.0 18 GCTAACG 20 7.0319534E-4 45.0 1 TATCGCG 20 7.0319534E-4 45.0 1 CTAGGCG 20 7.0319534E-4 45.0 1 CCCGATT 20 7.0319534E-4 45.0 13 TAATCCG 20 7.0319534E-4 45.0 28 >>END_MODULE