##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935114.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2230711 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.21946679780572 33.0 31.0 34.0 30.0 34.0 2 32.573258481264496 34.0 31.0 34.0 31.0 34.0 3 32.57184637543814 34.0 31.0 34.0 31.0 34.0 4 36.081122565854564 37.0 35.0 37.0 35.0 37.0 5 30.51368554689514 37.0 35.0 37.0 0.0 37.0 6 33.02115693157921 37.0 35.0 37.0 17.0 37.0 7 35.21220005639458 37.0 35.0 37.0 32.0 37.0 8 35.7878958771441 37.0 35.0 37.0 35.0 37.0 9 37.71784735898106 39.0 38.0 39.0 35.0 39.0 10 37.5967290249611 39.0 37.0 39.0 35.0 39.0 11 37.48015677512685 39.0 37.0 39.0 35.0 39.0 12 37.42277596694507 39.0 37.0 39.0 35.0 39.0 13 37.45116557008057 39.0 37.0 39.0 35.0 39.0 14 38.78786808331514 40.0 38.0 41.0 35.0 41.0 15 38.85130480819792 40.0 38.0 41.0 35.0 41.0 16 38.89330397348648 40.0 38.0 41.0 35.0 41.0 17 38.86681062674636 40.0 38.0 41.0 35.0 41.0 18 38.742875253674725 40.0 38.0 41.0 35.0 41.0 19 38.64618545387547 40.0 37.0 41.0 35.0 41.0 20 38.48474186033063 40.0 37.0 41.0 35.0 41.0 21 38.42366671433458 40.0 37.0 41.0 35.0 41.0 22 38.408816740492156 40.0 37.0 41.0 35.0 41.0 23 38.3543417322997 40.0 37.0 41.0 34.0 41.0 24 38.32677652999425 40.0 37.0 41.0 34.0 41.0 25 38.27933963655534 40.0 37.0 41.0 34.0 41.0 26 38.205100974532336 40.0 36.0 41.0 34.0 41.0 27 38.16087740635161 40.0 36.0 41.0 34.0 41.0 28 38.082633294944976 40.0 36.0 41.0 34.0 41.0 29 38.02954842648823 40.0 36.0 41.0 34.0 41.0 30 37.85518697850147 40.0 36.0 41.0 34.0 41.0 31 33.185161143689164 39.0 33.0 41.0 9.0 41.0 32 33.99873313934436 39.0 33.0 41.0 16.0 41.0 33 35.73184693131473 39.0 34.0 41.0 28.0 41.0 34 36.41396397830109 39.0 35.0 41.0 30.0 41.0 35 36.487216855971035 39.0 35.0 41.0 30.0 41.0 36 36.59452434672174 39.0 35.0 41.0 31.0 41.0 37 36.69633179735071 40.0 35.0 41.0 31.0 41.0 38 36.672390103424426 40.0 35.0 41.0 31.0 41.0 39 36.6504405994322 40.0 35.0 41.0 31.0 41.0 40 36.65355574971388 40.0 35.0 41.0 31.0 41.0 41 36.58076460823477 40.0 35.0 41.0 31.0 41.0 42 36.464039940628794 40.0 35.0 41.0 30.0 41.0 43 36.45090152870542 39.0 35.0 41.0 30.0 41.0 44 36.3899788004811 39.0 35.0 41.0 30.0 41.0 45 36.341765472981486 39.0 35.0 41.0 30.0 41.0 46 36.292478945053844 39.0 35.0 41.0 30.0 41.0 47 36.21251834056496 39.0 35.0 41.0 30.0 41.0 48 36.15954868201215 39.0 35.0 41.0 30.0 41.0 49 36.11206920125467 39.0 35.0 41.0 30.0 41.0 50 35.9306839837164 39.0 35.0 41.0 29.0 41.0 51 35.369813929280845 38.0 35.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 5.0 10 8.0 11 17.0 12 31.0 13 19.0 14 36.0 15 55.0 16 115.0 17 210.0 18 417.0 19 739.0 20 1383.0 21 2393.0 22 4014.0 23 7561.0 24 13559.0 25 20507.0 26 27403.0 27 29531.0 28 28594.0 29 28388.0 30 31402.0 31 39581.0 32 57519.0 33 69619.0 34 123438.0 35 185029.0 36 247983.0 37 251686.0 38 368357.0 39 690333.0 40 777.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.4356377854415 20.876572536738287 24.303596476639065 16.384193201181148 2 36.84004785918032 22.96402357813271 24.096218649569575 16.099709913117387 3 29.622393936283096 22.4388098682438 31.438810316531367 16.499985878941736 4 26.411623917217426 24.800881871295744 31.07049725401453 17.716996957472304 5 21.266627546105255 38.941395815056275 24.32107969163195 15.47089694720652 6 25.5404218654949 32.35331694692858 27.42493312670265 14.681328060873867 7 77.82805571855789 5.297100341550295 12.351084474860258 4.523759465031553 8 80.52078462875738 3.9180781374189664 11.72298876905166 3.838148464771994 9 74.47598545934457 6.303774895089504 13.654973683278559 5.565265962287361 10 38.048048357676095 26.202094309841122 21.31360808280409 14.43624924967869 11 26.218949922244523 25.16619140713432 29.977572173177077 18.637286497444087 12 23.72535034793839 22.85257928974215 32.857550798826026 20.564519563493434 13 22.10371491421345 23.151990553684453 34.80110153220207 19.94319299990003 14 20.215079407417637 25.24329686812859 34.13476689719108 20.406856827262697 15 19.73455996765157 26.59327003811789 34.550643270239846 19.12152672399069 16 22.663536424037 26.07316680645767 32.609827091003716 18.653469678501608 17 22.56051994184814 26.093698376885214 31.005719701028056 20.340061980238588 18 22.197944960149478 25.80459772691308 32.04570202056654 19.95175529237091 19 21.91449273348273 27.910966503504937 30.197008935716013 19.977531827296318 20 22.531515736462502 27.181871609545116 30.966673854210608 19.319938799781774 21 22.354397319957627 27.191778764707752 31.853386655644773 18.600437259689848 22 21.852135933341433 24.562392887290198 31.86849394654888 21.716977232819488 23 20.857654801540853 25.111589981848837 32.27917018385617 21.751585032754132 24 20.971519842776583 24.92882314203857 33.144634154760524 20.95502286042432 25 21.24744083836947 27.201416947332042 30.37632396128409 21.174818253014397 26 20.53161525630169 28.09117810420086 30.336202224313237 21.04100441518422 27 20.727875551785953 27.052226846059398 30.65408293588905 21.5658146662656 28 20.358621085384883 26.759943354383424 31.182345001212617 21.699090559019073 29 20.92682557265374 26.645540368070986 30.420525115086626 22.007108944188648 30 21.425904117566102 27.771235269831006 29.988062102172808 20.814798510430084 31 24.277954427982827 28.16989740042525 27.178240480277367 20.373907691314564 32 23.05031893418735 28.042269930977167 28.19796020192665 20.709450932908837 33 22.819674982550406 28.547848645566372 27.947501939964432 20.684974431918793 34 21.77906506042244 28.326977362822888 28.336077600370462 21.55787997638421 35 22.47718328371537 28.584742712077 27.420181278525096 21.51789272568253 36 21.885219555558745 30.840839535018205 26.85305268140965 20.4208882280134 37 22.687116349899203 29.13788473719814 27.83686456918893 20.338134343713733 38 22.511701426137225 28.339708729638218 27.870217163944588 21.278372680279965 39 22.221390399742504 28.314783941084254 27.43228504275094 22.031540616422298 40 21.92798618915673 26.966828065132596 29.268695048350057 21.836490697360617 41 20.785883962557232 28.3684439624855 28.4072208367646 22.438451238192666 42 21.06830512782696 28.6302438998149 28.23539221351399 22.066058758844154 43 21.576349424017724 27.28376737282418 29.444827232214305 21.695055970943795 44 22.23089409609761 26.71260418763345 28.0561220167023 23.00037969956664 45 21.621940269268407 26.47254619715418 27.923428897781914 23.98208463579549 46 21.67613823574636 27.357286533307096 27.997754975879886 22.968820255066657 47 20.862272163449234 27.33115136833055 29.358397389890488 22.448179078329733 48 20.651352864624776 26.6134429784943 29.981248131201216 22.753956025679706 49 21.889612773685162 26.048197189147317 29.48893872850405 22.573251308663473 50 20.301240277203096 25.98458518382704 30.153390555746572 23.560783983223285 51 20.363686734857183 25.668811423801646 29.082969510617918 24.884532330723253 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1009.0 1 1564.5 2 2120.0 3 17814.5 4 33509.0 5 24626.0 6 15743.0 7 14564.0 8 13385.0 9 13369.0 10 13353.0 11 13483.5 12 13614.0 13 13441.5 14 13269.0 15 12744.5 16 12220.0 17 11599.0 18 10978.0 19 10777.5 20 10577.0 21 10805.0 22 11033.0 23 12466.0 24 13899.0 25 15313.0 26 19434.0 27 22141.0 28 26441.5 29 30742.0 30 35878.5 31 41015.0 32 45413.0 33 49811.0 34 56970.0 35 64129.0 36 70201.0 37 76273.0 38 82235.0 39 88197.0 40 95628.5 41 103060.0 42 111512.5 43 119965.0 44 132725.5 45 145486.0 46 167151.0 47 188816.0 48 201876.5 49 214937.0 50 205068.5 51 195200.0 52 174622.5 53 154045.0 54 137207.5 55 120370.0 56 111243.5 57 102117.0 58 94402.0 59 86687.0 60 80499.5 61 74312.0 62 66563.0 63 58814.0 64 49657.0 65 40500.0 66 33682.5 67 26865.0 68 22183.5 69 17502.0 70 14630.0 71 11758.0 72 9661.5 73 7565.0 74 5706.5 75 3036.5 76 2225.0 77 1986.5 78 1748.0 79 1208.5 80 669.0 81 490.0 82 311.0 83 213.0 84 115.0 85 81.5 86 48.0 87 25.5 88 3.0 89 2.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2230711.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.580463923099426 #Duplication Level Percentage of deduplicated Percentage of total 1 75.44337640950317 23.070934505276224 2 9.749567527493953 5.96292596080701 3 3.4075580386174016 3.126141169974207 4 1.5870734873957866 1.9413377409845778 5 0.9745893340326548 1.490169698461155 6 0.6839156369129624 1.2548674476636248 7 0.5668215816095881 1.2133566849072317 8 0.4517457144273192 1.1051674817967527 9 0.37177686217936645 1.02321980291873 >10 6.337158141088067 47.883231021189424 >50 0.39383569415966946 7.1599857843348085 >100 0.029160566871712812 1.6195734067842533 >500 0.0013032402698661624 0.24749142766634752 >1k 0.0016290503373327032 1.2660521623817542 >5k 3.258100674665406E-4 0.7469578233553169 >10k+ 1.629050337332703E-4 0.8885878814985185 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17837 0.7996105277644661 No Hit CGTTTCTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGCCGTCTT 7883 0.35338508663829604 No Hit CGTTCTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGCCGTCTTC 7111 0.3187772867036564 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGCCGTCT 4165 0.18671177037276457 No Hit CGCTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGCCGTCTTCTG 3580 0.16048694788343268 No Hit CTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGCCGTCTTCTGCT 2933 0.13148274249779554 Illumina Single End Adapter 2 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGCCGTCTTCTGC 2752 0.12336873759083986 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGCC 2575 0.11543404770945227 No Hit CGTCTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGCCGTCTTCT 2434 0.10911319305817742 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.13861051476412678 0.0 2 0.0 0.0 0.0 0.43622862845074956 0.0 3 0.0 0.0 0.0 0.7616405711004249 0.0 4 0.0 0.0 0.0 1.1365434608068907 0.0 5 0.0 0.0 0.0 2.201271253873765 0.0 6 0.0 0.0 0.0 3.553216889144313 0.0 7 0.0 0.0 0.0 4.410656512654485 0.0 8 0.0 0.0 0.0 5.5281477519947675 0.0 9 0.0 0.0 0.0 6.071696423248014 0.0 10 0.0 0.0 0.0 6.871127635986912 0.0 11 0.0 0.0 0.0 8.002650276077896 0.0 12 4.4828756392020305E-5 0.0 0.0 8.803516009021338 0.0 13 4.4828756392020305E-5 0.0 0.0 9.1705738663592 0.0 14 4.4828756392020305E-5 0.0 0.0 9.333122937036666 4.4828756392020305E-5 15 8.965751278404061E-5 0.0 0.0 9.566591100326308 4.4828756392020305E-5 16 8.965751278404061E-5 0.0 0.0 10.034872289597352 4.4828756392020305E-5 17 8.965751278404061E-5 0.0 0.0 10.628270537958524 4.4828756392020305E-5 18 2.689725383521218E-4 0.0 0.0 11.241796897939714 4.4828756392020305E-5 19 2.689725383521218E-4 0.0 0.0 11.668925288842885 4.4828756392020305E-5 20 2.689725383521218E-4 0.0 0.0 12.041003966896653 4.4828756392020305E-5 21 2.689725383521218E-4 0.0 0.0 12.504264335451792 4.4828756392020305E-5 22 2.689725383521218E-4 0.0 0.0 13.015222500808038 4.4828756392020305E-5 23 2.689725383521218E-4 0.0 0.0 13.548639873116688 4.4828756392020305E-5 24 2.689725383521218E-4 0.0 0.0 13.96805771792043 4.4828756392020305E-5 25 2.689725383521218E-4 0.0 0.0 14.35215050268726 4.4828756392020305E-5 26 2.689725383521218E-4 0.0 0.0 14.699349220943457 4.4828756392020305E-5 27 2.689725383521218E-4 0.0 0.0 15.033637257358752 4.4828756392020305E-5 28 2.689725383521218E-4 0.0 0.0 15.395584636467925 4.4828756392020305E-5 29 2.689725383521218E-4 0.0 0.0 15.779856736260323 4.4828756392020305E-5 30 2.689725383521218E-4 0.0 0.0 16.18076030467416 4.4828756392020305E-5 31 2.689725383521218E-4 0.0 0.0 16.57126360160505 4.4828756392020305E-5 32 2.689725383521218E-4 0.0 0.0 17.006595654927956 4.4828756392020305E-5 33 3.138012947441421E-4 0.0 0.0 17.440582845559106 4.4828756392020305E-5 34 3.138012947441421E-4 0.0 0.0 17.84937627509794 4.4828756392020305E-5 35 3.138012947441421E-4 0.0 0.0 18.266821654620433 4.4828756392020305E-5 36 3.5863005113616244E-4 0.0 0.0 18.6934121004469 4.4828756392020305E-5 37 3.5863005113616244E-4 0.0 0.0 19.128295866205885 4.4828756392020305E-5 38 3.5863005113616244E-4 0.0 0.0 19.588956166890288 4.4828756392020305E-5 39 4.034588075281827E-4 0.0 0.0 20.046926742191168 4.4828756392020305E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTATT 2005 0.0 43.653366 1 CGTTTTT 12400 0.0 43.493954 1 CACGCGA 30 1.1402662E-4 37.500004 32 CGTTATC 145 0.0 37.24138 1 ACGGGTA 415 0.0 36.86747 5 CGAATAT 135 0.0 36.666664 14 AATACGG 270 0.0 36.666664 2 TAACGGG 695 0.0 36.582733 3 GCGTAAG 185 0.0 36.486485 1 GTATACG 105 0.0 36.42857 1 CGTTTCT 935 0.0 35.855614 1 TCTAGCG 95 0.0 35.526314 1 TACGGGA 1155 0.0 35.259743 4 CGTTCTG 940 0.0 35.18617 1 TAAGTCG 45 8.70481E-7 35.000004 1 GTTATTT 2565 0.0 35.0 2 CGTTAGG 240 0.0 34.687504 2 TAAGGGA 2385 0.0 34.62264 4 GCGTTAG 130 0.0 34.615387 1 CTTACGC 85 0.0 34.411762 29 >>END_MODULE