##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935112.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2974157 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.698346455819244 33.0 31.0 34.0 30.0 34.0 2 32.01406179969652 33.0 31.0 34.0 30.0 34.0 3 32.10172395068586 33.0 31.0 34.0 30.0 34.0 4 35.70498699295296 37.0 35.0 37.0 33.0 37.0 5 30.234712222656707 37.0 35.0 37.0 0.0 37.0 6 32.67468227131251 37.0 33.0 37.0 17.0 37.0 7 34.891930049422406 37.0 35.0 37.0 32.0 37.0 8 35.371517710732824 37.0 35.0 37.0 33.0 37.0 9 37.302210004381074 39.0 37.0 39.0 34.0 39.0 10 37.208957025469736 39.0 37.0 39.0 34.0 39.0 11 37.09588767506221 39.0 37.0 39.0 34.0 39.0 12 36.94180872092495 39.0 37.0 39.0 33.0 39.0 13 36.83032133138903 39.0 35.0 39.0 33.0 39.0 14 37.77873091433976 40.0 37.0 41.0 33.0 41.0 15 37.84311823484772 40.0 37.0 41.0 33.0 41.0 16 38.0178447203695 40.0 37.0 41.0 33.0 41.0 17 37.97875095363157 40.0 37.0 41.0 33.0 41.0 18 37.93493584904899 40.0 37.0 41.0 33.0 41.0 19 37.93660623833913 40.0 37.0 41.0 33.0 41.0 20 37.81138218325395 40.0 36.0 41.0 33.0 41.0 21 37.80442491771618 39.0 36.0 41.0 33.0 41.0 22 37.84809208121831 39.0 36.0 41.0 33.0 41.0 23 37.75333144820532 39.0 36.0 41.0 33.0 41.0 24 37.72719832880376 39.0 36.0 41.0 33.0 41.0 25 37.67717137999104 39.0 36.0 41.0 33.0 41.0 26 37.66491614262462 39.0 36.0 41.0 33.0 41.0 27 37.59805988722182 39.0 36.0 41.0 33.0 41.0 28 37.55258784253824 39.0 36.0 41.0 33.0 41.0 29 37.57166585355111 39.0 36.0 41.0 33.0 41.0 30 37.43858209233743 39.0 36.0 41.0 33.0 41.0 31 32.93336767359625 38.0 33.0 40.0 9.0 41.0 32 33.740848583312854 38.0 32.0 40.0 16.0 41.0 33 35.68685479616577 38.0 34.0 40.0 28.0 41.0 34 36.52323935824504 38.0 35.0 40.0 30.0 41.0 35 36.722590300377554 39.0 35.0 40.0 31.0 41.0 36 36.909072385889516 39.0 35.0 40.0 31.0 41.0 37 36.98064930667749 39.0 35.0 41.0 32.0 41.0 38 36.9602398259406 39.0 35.0 41.0 31.0 41.0 39 36.97780850170317 39.0 35.0 41.0 32.0 41.0 40 36.9835768589217 39.0 35.0 41.0 32.0 41.0 41 36.88235120069317 39.0 35.0 41.0 31.0 41.0 42 36.86372104767838 39.0 35.0 41.0 31.0 41.0 43 36.86871237799484 39.0 35.0 41.0 32.0 41.0 44 36.83331175859244 39.0 35.0 41.0 31.0 41.0 45 36.808636195063 39.0 35.0 40.0 31.0 41.0 46 36.76162858921032 39.0 35.0 40.0 31.0 41.0 47 36.60866659023044 39.0 35.0 40.0 31.0 41.0 48 36.6529070254193 39.0 35.0 40.0 31.0 41.0 49 36.707285123145816 39.0 35.0 40.0 31.0 41.0 50 36.52144792625272 39.0 35.0 40.0 31.0 41.0 51 35.97310565649359 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 6.0 10 13.0 11 14.0 12 15.0 13 30.0 14 44.0 15 74.0 16 148.0 17 296.0 18 605.0 19 1130.0 20 2056.0 21 3597.0 22 5962.0 23 9413.0 24 12719.0 25 15694.0 26 19130.0 27 23075.0 28 29184.0 29 38351.0 30 52258.0 31 75040.0 32 106743.0 33 131611.0 34 227846.0 35 277655.0 36 358273.0 37 351213.0 38 543541.0 39 688072.0 40 347.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.415389974369205 20.116490151663143 23.27509946515937 11.193020408808277 2 29.504057788475862 28.489383714444127 23.653156171647964 18.353402325432047 3 28.752853329531696 28.31837727463614 25.92576652812881 17.00300286770335 4 26.902110413135556 24.245424838029734 29.9345663325776 18.917898416257113 5 23.976844531072167 36.74513483988908 21.332666701858713 17.945353927180037 6 24.24075124480651 33.20796447531183 26.015943341256026 16.535340938625634 7 72.00255400101608 5.456067046897658 15.622880701993877 6.918498250092379 8 68.84656727940052 8.548876202567653 13.1607376476763 9.443818870355534 9 63.508886719833555 6.357364456550209 15.705458723261751 14.428290100354488 10 39.90377777635814 20.24849394298956 21.82847105919425 18.019257221458044 11 28.753862018716564 22.033470324532296 26.74324186651881 22.469425790232325 12 24.058481109100832 19.208165540689347 32.869179401087436 23.86417394912239 13 23.61314483398153 21.388850689455868 36.31761874036912 18.680385736193482 14 19.00599060506893 26.36518516003022 31.665241613001598 22.96358262189925 15 15.90491019808302 23.638900031168497 39.08344448527768 21.372745285470806 16 19.081608670961216 25.846685296035144 29.344853012130834 25.726853020872802 17 19.64933256717786 26.08117190854417 29.152092508902523 25.11740301537545 18 20.06803944781664 24.182280895056984 32.382890345062485 23.36678931206389 19 19.298813075436165 26.58652519016313 28.610056563927188 25.504605170473514 20 20.106672243597092 28.315519321945683 31.524899324413607 20.05290911004362 21 19.842294808243143 29.38012351062839 30.80405640993397 19.973525271194493 22 18.248565896151415 24.2372544556323 30.139901827643932 27.374277820572352 23 18.177318816726892 27.224319361755278 30.1758784085709 24.42248341294693 24 21.96356816402093 23.510930996581553 28.19242561841893 26.333075220978586 25 18.741545923769323 28.99621640686756 24.978809121374564 27.28342854798856 26 18.017676941735086 24.2395744407575 28.60249139504068 29.140257222466737 27 21.739101197414932 24.254267679883746 28.515071665685436 25.49155945701589 28 17.728183145677917 24.604619056761294 29.330395133814392 28.3368026637464 29 19.183688016469876 23.712836948419334 26.083828123397655 31.019646911713135 30 21.42365046633382 24.120481870997395 28.731401872866837 25.724465789801947 31 25.290359587607515 24.86240638944077 23.213199572181296 26.63403445077042 32 20.897551810479406 27.135083991867276 25.940190783472428 26.027173414180893 33 20.18888041216385 21.508212242998603 27.761614467561735 30.54129287727581 34 20.15566091500886 21.139334608092312 27.930838889809785 30.774165587089048 35 16.517655254917614 22.81759167387599 31.28957213758386 29.375180933622534 36 20.186762164875628 21.941007149252712 30.544924158341342 27.32730652753032 37 18.937130756715266 24.103367777827465 33.24585756569004 23.713643899767227 38 20.875764124086256 24.38859145633536 28.05278941226035 26.68285500731804 39 20.74977884489622 22.62109902066367 28.505589987347673 28.12353214709244 40 19.5801364890959 19.05101176568688 32.15314457172234 29.215707173494877 41 17.864457054553608 21.303347469551877 29.82740991817177 31.00478555772274 42 19.82904735694854 19.189134938068165 36.0336391118559 24.948178593127395 43 21.687927032769284 19.323223353709977 33.024954634203915 25.963894979316827 44 20.589061034773888 19.64230536585661 29.291863206952424 30.47677039241708 45 20.32044710484349 17.897273076034654 28.1725208185042 33.60975900061766 46 23.99634585531295 19.6558890468795 29.546826209914272 26.800938887893277 47 15.978611754524055 19.84397595688459 37.15526786245648 27.02214442613487 48 17.938057742076158 20.214501117459502 32.16101234736431 29.686428793100028 49 20.926198583329665 16.8376114643578 36.50163727066191 25.73455268165063 50 20.25901793348502 16.823523438742473 33.24908537108162 29.668373256690888 51 18.130246654766378 16.695991502802308 29.252826935498028 35.9209349069333 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2756.0 1 3363.5 2 3971.0 3 4983.5 4 5996.0 5 5045.0 6 4094.0 7 4194.5 8 4295.0 9 4805.0 10 5315.0 11 5664.5 12 6014.0 13 6082.0 14 6150.0 15 6459.5 16 6769.0 17 6723.0 18 6677.0 19 6811.0 20 6945.0 21 7418.5 22 7892.0 23 8472.0 24 9052.0 25 9648.0 26 12256.5 27 14269.0 28 16704.0 29 19139.0 30 22467.0 31 25795.0 32 30263.0 33 34731.0 34 42010.0 35 49289.0 36 53284.5 37 57280.0 38 62916.5 39 68553.0 40 79506.0 41 90459.0 42 109303.0 43 128147.0 44 161311.0 45 194475.0 46 300157.0 47 405839.0 48 420455.5 49 435072.0 50 424471.5 51 413871.0 52 341960.5 53 270050.0 54 225797.0 55 181544.0 56 155717.0 57 129890.0 58 117424.5 59 104959.0 60 92924.0 61 80889.0 62 69915.0 63 58941.0 64 50941.0 65 42941.0 66 36392.5 67 29844.0 68 24574.5 69 19305.0 70 15828.5 71 12352.0 72 10754.0 73 9156.0 74 7385.0 75 4170.5 76 2727.0 77 2160.0 78 1593.0 79 1210.5 80 828.0 81 558.5 82 289.0 83 193.5 84 98.0 85 69.5 86 41.0 87 23.0 88 5.0 89 3.5 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2974157.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.606514860716313 #Duplication Level Percentage of deduplicated Percentage of total 1 61.37190307516798 14.48776741974394 2 14.130630597434646 6.671498823792672 3 6.933871505194741 4.910536221890312 4 4.071347839357135 3.8444133309171784 5 2.557053748853454 3.0181563660979713 6 1.7499120083528719 2.47855942980768 7 1.2744046478019724 2.1058976579832236 8 0.9443983170694559 1.783516232506847 9 0.6950377551761019 1.47666771866912 >10 5.224471295590433 27.0707831729102 >50 0.8888731652871666 13.744016542858429 >100 0.13627743360540867 5.556924254705073 >500 0.010987789766948353 1.8066055371545542 >1k 0.008633263388316563 3.6927306206681214 >5k 0.0012557474019369546 1.9328882090984107 >10k+ 9.418105514527159E-4 5.419038461196403 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGC 32482 1.0921414034296104 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCG 27023 0.9085935947564301 No Hit GCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGC 25306 0.8508629504091412 TruSeq Adapter, Index 13 (95% over 21bp) GAATCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTC 24928 0.8381534666798021 No Hit CTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGCT 19533 0.6567575282676738 TruSeq Adapter, Index 16 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGC 16972 0.5706490948527599 TruSeq Adapter, Index 13 (95% over 21bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTGACCTTT 9852 0.33125352831071125 No Hit TCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGC 7428 0.2497514421733621 TruSeq Adapter, Index 13 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCT 6512 0.21895279906205353 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTC 6370 0.21417833692034416 No Hit GAACTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCT 5621 0.18899473027146851 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTGACCTTTCGTA 5569 0.18724633568436366 No Hit ACTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGC 5480 0.18425389110258805 TruSeq Adapter, Index 16 (95% over 22bp) TGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGCTT 5331 0.17924406815107607 TruSeq Adapter, Index 13 (95% over 23bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCC 4729 0.15900303850805456 No Hit GCCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTG 4239 0.14252778182187423 No Hit ACCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTG 3837 0.1290113467446406 TruSeq Adapter, Index 16 (95% over 21bp) AGCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTG 3716 0.12494296703233891 TruSeq Adapter, Index 16 (95% over 21bp) GGCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTG 3661 0.12309370352674724 No Hit CGCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTG 3189 0.10722366035148784 TruSeq Adapter, Index 16 (95% over 21bp) CGTTCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTC 3012 0.10127239416076554 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.6811486414469715E-4 0.0 0.0 0.6902123862324686 0.0 2 1.6811486414469715E-4 0.0 0.0 2.647136650822401 0.0 3 1.6811486414469715E-4 0.0 0.0 3.669073286985186 0.0 4 1.6811486414469715E-4 0.0 0.0 5.111061722699911 0.0 5 1.6811486414469715E-4 0.0 0.0 8.915904573968355 0.0 6 1.6811486414469715E-4 0.0 0.0 10.955305990907675 0.0 7 1.6811486414469715E-4 0.0 0.0 12.983040236275354 0.0 8 1.6811486414469715E-4 0.0 0.0 16.110178447203694 0.0 9 1.6811486414469715E-4 0.0 0.0 17.1235412252951 0.0 10 2.0173783697363657E-4 0.0 0.0 20.241971086260744 0.0 11 2.3536080980257599E-4 0.0 0.0 23.415139146991905 0.0 12 2.3536080980257599E-4 0.0 0.0 27.20283428211759 0.0 13 2.3536080980257599E-4 0.0 0.0 28.2847543018072 0.0 14 2.3536080980257599E-4 0.0 0.0 28.780760396979716 0.0 15 2.3536080980257599E-4 0.0 0.0 29.766485091405734 0.0 16 2.3536080980257599E-4 0.0 0.0 31.263480710668603 0.0 17 2.3536080980257599E-4 0.0 0.0 32.88615900236605 0.0 18 2.3536080980257599E-4 0.0 0.0 34.54894950064842 0.0 19 2.689837826315154E-4 0.0 0.0 36.12321071147219 0.0 20 2.689837826315154E-4 0.0 0.0 37.191547050138915 0.0 21 2.689837826315154E-4 0.0 0.0 38.354935532993046 0.0 22 2.689837826315154E-4 0.0 0.0 39.5189292293581 0.0 23 2.689837826315154E-4 0.0 0.0 40.54627916414634 0.0 24 2.689837826315154E-4 0.0 0.0 41.38574392676647 0.0 25 2.689837826315154E-4 0.0 0.0 42.18109534903504 0.0 26 3.0260675546045485E-4 0.0 0.0 42.87725900145823 0.0 27 3.0260675546045485E-4 0.0 0.0 43.60845779156917 0.0 28 3.362297282893943E-4 0.0 0.0 44.276815245462835 0.0 29 3.362297282893943E-4 0.0 0.0 45.00764418287266 0.0 30 3.362297282893943E-4 0.0 0.0 45.800541128124706 0.0 31 3.362297282893943E-4 0.0 0.0 46.464964694197384 0.0 32 3.362297282893943E-4 0.0 0.0 47.19693681268339 0.0 33 3.362297282893943E-4 0.0 0.0 47.90291837317263 0.0 34 3.698527011183337E-4 0.0 0.0 48.649045763219625 0.0 35 3.698527011183337E-4 0.0 0.0 49.391508249228266 0.0 36 4.0347567394727313E-4 0.0 0.0 50.069414627405344 0.0 37 4.0347567394727313E-4 0.0 0.0 50.775093581139124 0.0 38 4.7072161960515197E-4 0.0 0.0 51.54895992377 0.0 39 5.043445924340914E-4 0.0 0.0 52.56117952078522 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATCCG 20 7.035096E-4 45.0 13 CCCGTTA 20 7.035096E-4 45.0 1 CGCTATA 20 7.035096E-4 45.0 27 TCGCGAC 20 7.035096E-4 45.0 33 TATCGCG 100 0.0 42.750004 1 TCTAACG 470 0.0 42.606384 28 TAATACG 1190 0.0 42.35294 4 CGCCTAA 575 0.0 41.47826 26 ACGTAAG 170 0.0 41.02941 1 GCCGATA 50 1.0822987E-9 40.500004 9 ACGCCTA 600 0.0 40.5 25 AATACGG 1260 0.0 40.0 5 ACGATAG 85 0.0 39.705883 1 CTTACGC 350 0.0 39.214287 29 TTACGGG 790 0.0 39.018986 3 TACGGGA 1060 0.0 38.84434 4 ATAATAC 1785 0.0 38.697475 3 GACGCGT 390 0.0 38.653847 26 CGTACTA 35 6.2516356E-6 38.571426 44 TACGGCT 4765 0.0 38.24764 7 >>END_MODULE