##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935109.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2232268 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.0804621129721 33.0 31.0 34.0 30.0 34.0 2 32.41229502909149 34.0 31.0 34.0 30.0 34.0 3 32.46710654813849 34.0 31.0 34.0 30.0 34.0 4 35.96486891358923 37.0 35.0 37.0 35.0 37.0 5 30.41405153861454 37.0 35.0 37.0 0.0 37.0 6 32.89587316576684 37.0 35.0 37.0 17.0 37.0 7 35.10980222804789 37.0 35.0 37.0 32.0 37.0 8 35.718027584501506 37.0 35.0 37.0 35.0 37.0 9 37.6427543646193 39.0 37.0 39.0 35.0 39.0 10 37.50796275357618 39.0 37.0 39.0 35.0 39.0 11 37.338602264602635 39.0 37.0 39.0 35.0 39.0 12 37.01830156594101 39.0 35.0 39.0 34.0 39.0 13 36.86229565625633 39.0 35.0 39.0 33.0 39.0 14 37.62081210679005 40.0 37.0 41.0 32.0 41.0 15 37.851337294625914 40.0 37.0 41.0 33.0 41.0 16 38.10716007217771 40.0 37.0 41.0 33.0 41.0 17 38.193750033598114 40.0 37.0 41.0 34.0 41.0 18 38.177164659440535 40.0 36.0 41.0 34.0 41.0 19 38.17956401292318 40.0 36.0 41.0 34.0 41.0 20 38.07399156373697 40.0 36.0 41.0 33.0 41.0 21 38.039364001096644 40.0 36.0 41.0 34.0 41.0 22 38.094495822186225 40.0 36.0 41.0 34.0 41.0 23 38.06831124219852 40.0 36.0 41.0 34.0 41.0 24 38.040965959284456 40.0 36.0 41.0 34.0 41.0 25 37.97828576138707 40.0 36.0 41.0 34.0 41.0 26 37.924094239580555 40.0 35.0 41.0 34.0 41.0 27 37.88905095624719 40.0 35.0 41.0 34.0 41.0 28 37.8176925888827 40.0 35.0 41.0 34.0 41.0 29 37.79135121768533 40.0 35.0 41.0 34.0 41.0 30 37.68247450574931 40.0 35.0 41.0 33.0 41.0 31 33.03267439214288 38.0 33.0 41.0 9.0 41.0 32 33.92491403361962 38.0 33.0 41.0 16.0 41.0 33 35.86254428231736 38.0 34.0 41.0 29.0 41.0 34 36.66807211320504 38.0 35.0 41.0 31.0 41.0 35 36.82837051823527 39.0 35.0 41.0 31.0 41.0 36 36.92547265830088 39.0 35.0 41.0 31.0 41.0 37 37.023339491494745 39.0 35.0 41.0 32.0 41.0 38 37.020903404071554 39.0 35.0 41.0 32.0 41.0 39 37.01355124026327 39.0 35.0 41.0 32.0 41.0 40 37.03875833905248 39.0 35.0 41.0 32.0 41.0 41 36.936982924989294 39.0 35.0 41.0 32.0 41.0 42 36.86195205951974 39.0 35.0 41.0 32.0 41.0 43 36.86809065936527 39.0 35.0 41.0 32.0 41.0 44 36.8515518745957 39.0 35.0 41.0 32.0 41.0 45 36.86860179870876 39.0 35.0 41.0 32.0 41.0 46 36.87184379294959 39.0 35.0 41.0 32.0 41.0 47 36.75669274477796 39.0 35.0 41.0 32.0 41.0 48 36.71459340903512 38.0 35.0 41.0 32.0 41.0 49 36.68179000012543 38.0 35.0 40.0 32.0 41.0 50 36.50812088871049 38.0 35.0 40.0 32.0 41.0 51 35.86473308760418 37.0 34.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 4.0 10 17.0 11 18.0 12 27.0 13 37.0 14 54.0 15 74.0 16 135.0 17 255.0 18 424.0 19 738.0 20 1245.0 21 1926.0 22 3195.0 23 4870.0 24 7204.0 25 9511.0 26 12185.0 27 15287.0 28 19390.0 29 25700.0 30 36125.0 31 54229.0 32 77880.0 33 96703.0 34 189483.0 35 207175.0 36 249573.0 37 253450.0 38 383029.0 39 581782.0 40 539.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.10987748782853 20.66750049725212 25.66013579014706 10.562486224772293 2 32.47329621712088 22.813344992626334 25.764513938290563 18.948844851962217 3 32.43279928754074 23.311761849383675 27.202647710758743 17.052791152316836 4 29.56907503937699 24.69963283978447 26.12486493557225 19.606427185266284 5 22.400894516249842 39.00517321396893 22.042962583345727 16.550969686435497 6 27.601300560685367 31.84743050565613 25.08802706485064 15.463241868807867 7 80.71239654020037 5.620740878783372 8.126622789019956 5.540239791996301 8 82.23537675583756 4.113126201692628 8.504086426898562 5.147410615571248 9 76.6244465270299 6.138689440515207 10.606298168499482 6.630565863955404 10 45.346123314942474 23.168006708871875 17.290441828669316 14.195428147516337 11 34.02978495413633 24.606409266270894 23.26472448648639 18.099081293106384 12 30.270648506362143 20.922039826759153 29.00507465949429 19.80223700738442 13 27.997713536188307 22.331010434231015 31.159833855074748 18.51144217450593 14 21.677235887447203 23.931490304927543 34.159966455640635 20.23130735198462 15 20.249674322258798 24.48299218552611 35.50877403609244 19.75855945612265 16 27.402175724420186 24.441196128780234 28.21077039136878 19.945857755430797 17 27.218998794051608 22.964043743851544 26.013811961646184 23.80314550045066 18 27.46148759915924 22.78350986530291 30.070986100235274 19.68401643530257 19 25.834218830355493 25.19101649085146 26.892290710613597 22.082473968179446 20 23.726631390137744 29.79189774704471 27.92299132541433 18.558479537403215 21 23.276595820931895 26.269247240922684 31.553917361177064 18.900239576968357 22 21.912109119514323 22.652118831609826 32.55648515321637 22.879286895659483 23 21.75630345460312 24.703216638862358 31.48730349581681 22.053176410717708 24 22.713356998353245 26.85501920020356 28.354122354484318 22.077501446958877 25 23.694466793413692 26.439164114703072 26.387647002958424 23.478722088924805 26 20.78522829696076 25.59204360766718 27.90529631746726 25.717431777904803 27 22.179594923190226 24.342193679253565 30.278891244241287 23.199320153314925 28 19.73952052352137 25.68894057523559 28.709769615476276 25.861769285766762 29 22.631870366819754 26.674978094028134 28.126282328107553 22.56686921104455 30 26.950482648140817 24.023235561321492 27.732557201913032 21.293724588624663 31 26.954872802011227 25.390141327116638 27.159686919312552 20.49529895155958 32 27.318001243578284 25.37961391732534 26.410045747195227 20.892339091901153 33 28.052545662080004 24.138947474048813 26.452334576314314 21.35617228755687 34 23.33765479772142 23.620371747478348 31.9038305436444 21.13814291115583 35 24.9059700716939 26.62556646424175 27.659089320816317 20.809374143248032 36 27.767723230364812 24.95090195263293 27.530117351500806 19.751257465501453 37 24.269487355460903 27.153056891018462 28.071763784635177 20.505691968885458 38 25.200379165942437 26.019008470309117 27.224240100203023 21.556372263545416 39 24.61707106852761 23.9296984053886 27.681129685145333 23.772100840938453 40 28.12368407377609 21.709490079148203 28.90580342503678 21.26102242203893 41 23.680445179521456 22.597331503206604 27.540689558780578 26.181533758491366 42 23.130152831111676 22.139590765983296 31.901321884289878 22.82893451861515 43 22.989488717304553 22.29853225508765 31.50307221175952 23.208906815848277 44 23.785316100038166 22.49402849478647 29.227046214881007 24.493609190294354 45 23.02272845375197 22.389605549154492 27.321316257725325 27.266349739368213 46 24.43541725276714 22.33419105591264 28.7813560020571 24.44903568926312 47 21.225677203633257 24.007735630309625 31.870456414731564 22.896130751325558 48 22.08386269032213 25.412450476376492 29.657460484135417 22.84622634916596 49 25.151908283414 22.060478401338905 30.48442212135819 22.303191193888907 50 22.778985318967077 23.005436623201156 29.034237824490607 25.18134023334116 51 22.303728763750588 23.104170287796986 27.31159520272655 27.28050574572587 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1023.0 1 1693.5 2 2364.0 3 3232.5 4 4101.0 5 3306.5 6 2512.0 7 2526.0 8 2540.0 9 2733.5 10 2927.0 11 2995.0 12 3063.0 13 3239.0 14 3415.0 15 3300.5 16 3186.0 17 3267.0 18 3348.0 19 3714.5 20 4081.0 21 4768.5 22 5456.0 23 6847.0 24 8238.0 25 9326.0 26 12876.0 27 15338.0 28 18442.0 29 21546.0 30 27382.0 31 33218.0 32 36246.5 33 39275.0 34 45033.5 35 50792.0 36 55789.0 37 60786.0 38 66624.0 39 72462.0 40 81858.0 41 91254.0 42 101264.0 43 111274.0 44 126402.5 45 141531.0 46 161532.5 47 181534.0 48 208842.5 49 236151.0 50 238548.5 51 240946.0 52 210831.5 53 180717.0 54 165442.0 55 150167.0 56 140829.5 57 131492.0 58 125047.5 59 118603.0 60 101234.5 61 83866.0 62 74953.5 63 66041.0 64 57343.0 65 48645.0 66 42028.0 67 35411.0 68 30103.5 69 24796.0 70 20489.5 71 16183.0 72 12946.5 73 9710.0 74 7880.5 75 5148.0 76 4245.0 77 3117.5 78 1990.0 79 1529.0 80 1068.0 81 634.5 82 201.0 83 133.0 84 65.0 85 86.5 86 108.0 87 109.5 88 111.0 89 60.5 90 10.0 91 9.0 92 8.0 93 6.5 94 5.0 95 2.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2232268.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.937848982954907 #Duplication Level Percentage of deduplicated Percentage of total 1 66.70542807686431 15.96784463647338 2 13.685670387154241 6.552110219163926 3 5.7942293697397815 4.1610416287629866 4 2.976821031890626 2.8503476924272717 5 1.7799679803596793 2.130430235417262 6 1.13640904889302 1.632191291715872 7 0.8533282675811759 1.4298790241571306 8 0.5842845346093046 1.11892119620429 9 0.4646790170612812 1.0011074522364787 >10 4.0412688948803215 21.911897297218594 >50 1.7304354979589562 29.366117088331812 >100 0.2371575618382549 8.012086147645403 >500 0.005265475086280277 0.8476721003560145 >1k 0.004212380069024221 1.6058024383714424 >5k 8.424760138048444E-4 1.4125515515181382 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 8465 0.3792107399290766 No Hit CCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCTGC 6848 0.30677320106725536 No Hit GCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCTGC 6402 0.286793521208027 No Hit CTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCTGCT 6302 0.28231377236066635 Illumina Single End Adapter 1 (95% over 21bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 4716 0.21126495564152692 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA 2419 0.10836512461765344 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.29597700634511626 0.0 2 0.0 0.0 0.0 1.1090066246525956 0.0 3 0.0 0.0 0.0 1.5628947778671736 0.0 4 0.0 0.0 0.0 2.102525324020234 0.0 5 0.0 0.0 0.0 3.517857174855349 0.0 6 0.0 0.0 0.0 4.456812533262135 0.0 7 0.0 0.0 0.0 5.305500952394605 0.0 8 0.0 0.0 0.0 6.674960175032747 0.0 9 0.0 0.0 0.0 7.189011355267378 0.0 10 0.0 0.0 0.0 8.277948705083798 0.0 11 0.0 0.0 0.0 9.972279314132532 0.0 12 0.0 0.0 0.0 11.308588395300205 0.0 13 0.0 0.0 0.0 11.903051067344961 0.0 14 0.0 0.0 0.0 12.151408343442633 0.0 15 0.0 0.0 0.0 12.616719856217982 0.0 16 0.0 0.0 0.0 13.394180268677417 0.0 17 0.0 0.0 0.0 14.31844205086486 0.0 18 0.0 0.0 0.0 15.378485020615804 0.0 19 0.0 0.0 0.0 16.049596195438898 0.0 20 0.0 0.0 0.0 16.704759464365388 0.0 21 0.0 0.0 0.0 17.394551191881977 0.0 22 4.4797488473606214E-5 0.0 0.0 18.138861462870945 0.0 23 4.4797488473606214E-5 0.0 0.0 18.83792627050157 0.0 24 4.4797488473606214E-5 0.0 0.0 19.391892012966185 0.0 25 4.4797488473606214E-5 0.0 0.0 19.943438691053224 0.0 26 4.4797488473606214E-5 0.0 0.0 20.439346888456047 0.0 27 4.4797488473606214E-5 0.0 0.0 21.035019092689588 0.0 28 4.4797488473606214E-5 0.0 0.0 21.551758122232634 0.0 29 4.4797488473606214E-5 0.0 0.0 22.16472215701699 0.0 30 4.4797488473606214E-5 0.0 0.0 22.938464377933116 0.0 31 4.4797488473606214E-5 0.0 0.0 23.46671636201388 0.0 32 8.959497694721243E-5 0.0 0.0 24.072378406177037 0.0 33 8.959497694721243E-5 0.0 0.0 24.662674911793744 0.0 34 2.6878493084163727E-4 0.0 0.0 25.333562099174472 0.0 35 2.6878493084163727E-4 0.0 0.0 26.037689023002613 0.0 36 2.6878493084163727E-4 0.0 0.0 26.638871318318408 0.0 37 2.6878493084163727E-4 0.0 0.0 27.30783221369477 0.0 38 2.6878493084163727E-4 0.0 0.0 28.134928243382962 0.0 39 2.6878493084163727E-4 0.0 0.0 29.6291484714201 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGCGTTA 20 7.034717E-4 45.0 23 AATTTCG 20 7.034717E-4 45.0 21 CTATCGA 25 3.891992E-5 45.0 28 CGCAATA 35 1.2126111E-7 45.0 14 CCAACGG 105 0.0 42.857143 2 ACGGGTA 275 0.0 40.909092 5 CGTAAGG 365 0.0 40.684933 2 CGTTGTA 95 0.0 40.263153 29 TACCGTA 40 3.4601726E-7 39.375 43 CGTTAGG 255 0.0 38.82353 2 ACGTTAG 35 6.2509353E-6 38.571426 1 CGTTAGT 35 6.2509353E-6 38.571426 30 GCGTTAG 160 0.0 37.96875 1 TAGCACG 95 0.0 37.894733 1 ACTTGAC 1060 0.0 37.78302 6 CCGTAAA 30 1.1402663E-4 37.500004 13 TGCATTA 865 0.0 37.456646 15 CACGGGA 705 0.0 37.340424 4 ATAACGG 255 0.0 37.058823 2 CTACGGG 675 0.0 37.000004 3 >>END_MODULE