##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935108.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1935765 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.063725710507214 33.0 31.0 34.0 30.0 34.0 2 32.39092090207231 34.0 31.0 34.0 30.0 34.0 3 32.44374549596671 34.0 31.0 34.0 30.0 34.0 4 35.94253434688611 37.0 35.0 37.0 35.0 37.0 5 30.41775732074916 37.0 35.0 37.0 0.0 37.0 6 32.88953462842856 37.0 35.0 37.0 17.0 37.0 7 35.07082781226027 37.0 35.0 37.0 32.0 37.0 8 35.59507791493286 37.0 35.0 37.0 35.0 37.0 9 37.472270136096064 39.0 37.0 39.0 35.0 39.0 10 37.416072715438084 39.0 37.0 39.0 35.0 39.0 11 37.31925982751005 39.0 37.0 39.0 35.0 39.0 12 37.182466880019014 39.0 37.0 39.0 34.0 39.0 13 37.12533959442391 39.0 37.0 39.0 33.0 39.0 14 38.33056440218725 40.0 38.0 41.0 34.0 41.0 15 38.4280679731269 40.0 38.0 41.0 34.0 41.0 16 38.52090517185712 40.0 38.0 41.0 34.0 41.0 17 38.50655838906066 40.0 38.0 41.0 34.0 41.0 18 38.4736788814758 40.0 38.0 41.0 34.0 41.0 19 38.45672951003867 40.0 37.0 41.0 34.0 41.0 20 38.3912773502982 40.0 37.0 41.0 34.0 41.0 21 38.349124506332124 40.0 37.0 41.0 34.0 41.0 22 38.32923882806023 40.0 37.0 41.0 34.0 41.0 23 38.25614989422786 40.0 37.0 41.0 34.0 41.0 24 38.23279013723257 40.0 37.0 41.0 34.0 41.0 25 38.15944859009229 40.0 37.0 41.0 34.0 41.0 26 38.060684535571205 40.0 37.0 41.0 34.0 41.0 27 38.009488238500026 40.0 36.0 41.0 34.0 41.0 28 37.94153732503687 40.0 36.0 41.0 34.0 41.0 29 37.91966018602464 40.0 36.0 41.0 34.0 41.0 30 37.81972191872464 40.0 36.0 41.0 33.0 41.0 31 33.21969402277652 39.0 33.0 41.0 9.0 41.0 32 34.121880496857834 39.0 33.0 41.0 16.0 41.0 33 36.08410060105437 39.0 34.0 41.0 30.0 41.0 34 36.928887029159014 39.0 35.0 41.0 31.0 41.0 35 37.09891541586918 39.0 35.0 41.0 32.0 41.0 36 37.25255028373795 39.0 35.0 41.0 33.0 41.0 37 37.368933729042524 39.0 35.0 41.0 33.0 41.0 38 37.333548235452135 39.0 35.0 41.0 33.0 41.0 39 37.35307384935671 39.0 35.0 41.0 33.0 41.0 40 37.32059366710319 39.0 35.0 41.0 33.0 41.0 41 37.25807368146443 39.0 35.0 41.0 33.0 41.0 42 37.15386010182021 39.0 35.0 41.0 33.0 41.0 43 37.1443770292365 39.0 35.0 41.0 33.0 41.0 44 37.08713712666569 39.0 35.0 41.0 33.0 41.0 45 37.05954390124835 39.0 35.0 41.0 33.0 41.0 46 37.007463199303636 39.0 35.0 41.0 32.0 41.0 47 36.920688203371796 39.0 35.0 41.0 32.0 41.0 48 36.90748257148982 39.0 35.0 41.0 32.0 41.0 49 36.89528945920605 39.0 35.0 41.0 32.0 41.0 50 36.7175023827789 39.0 35.0 41.0 32.0 41.0 51 36.121952303094645 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 12.0 10 6.0 11 15.0 12 21.0 13 19.0 14 35.0 15 58.0 16 91.0 17 197.0 18 338.0 19 671.0 20 1070.0 21 1792.0 22 3088.0 23 4787.0 24 6821.0 25 8725.0 26 10594.0 27 12960.0 28 15879.0 29 20376.0 30 26931.0 31 38613.0 32 59411.0 33 69026.0 34 127142.0 35 184251.0 36 227003.0 37 227891.0 38 336429.0 39 550999.0 40 514.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.30952620798495 21.334356184764165 25.563123622960433 10.79299398429045 2 31.488842912233668 25.541271796938158 24.60753242258229 18.36235286824589 3 32.40176364383073 25.00535963817922 24.793040477537303 17.79983624045274 4 28.69341061544144 25.214992522336132 26.451299615397527 19.640297246824897 5 23.520675288581 38.84748406960556 19.978199833140902 17.65364080867254 6 26.62125826223741 34.840592737238254 22.34858053534391 16.189568465180432 7 78.84087169671939 6.458635216568127 9.065924841083499 5.634568245628989 8 79.16637608387381 6.704377855783114 8.180125170152369 5.9491208901907 9 73.21839169527293 7.8314258187331625 10.760035438185938 8.190147047807972 10 40.84865673260959 26.125588591590404 17.18628035944446 15.83947431635555 11 31.40747973023585 25.755399028291144 23.135091294656117 19.70202994681689 12 27.873837991698373 22.073960423915093 28.314438994402728 21.737762589983806 13 25.25451178216364 24.06593775587429 30.148804219520446 20.53074624244162 14 20.273845223981215 28.43650959698104 28.396732041337664 22.892913137700084 15 18.862155271946747 25.97505379010365 33.73141884474614 21.431372093203464 16 21.66781608304727 25.871012235472797 29.74513951848494 22.716032162994992 17 21.210942443943352 25.861042016980367 27.43199716907786 25.496018369998424 18 22.300537513592815 25.016776313240502 29.27302642624492 23.40965974692176 19 22.601400479913625 26.8936053704866 27.663275242604346 22.841718906995425 20 25.61917381500337 26.513290611205388 26.95538972964177 20.91214584414947 21 23.61526321635116 27.589144343450776 27.346811209005224 21.448781231192836 22 22.289430793510576 25.049734859345012 27.19214367446462 25.468690672679795 23 21.81173851164785 26.756811906403925 27.83137415956999 23.600075422378232 24 22.70781835605045 24.73983153946889 28.08620881150346 24.466141292977195 25 21.6727753627119 28.053146947072605 25.867447753213845 24.40662993700165 26 21.67902612145586 28.093027821042327 26.68361087218748 23.54433518531433 27 23.00547845425452 26.97207563934672 27.26772103018703 22.75472487621173 28 20.150483142323576 27.271492149098677 28.710613116778124 23.867411591799627 29 21.509687384574057 26.198996262459545 27.481073374092414 24.810242978873987 30 23.421283058635733 25.923859559399 27.230319796049624 23.424537585915644 31 24.261984280116646 27.420477175690234 24.279755032248232 24.03778351194489 32 22.51616286067782 27.151591231373644 25.687363910392015 24.644881997556524 33 22.8951861408797 24.711057385581412 27.084279341758943 25.309477131779946 34 20.664336838407554 25.340369311357524 27.801670140745387 26.19362370948953 35 21.122243660774938 25.13047813138475 26.40155184126172 27.34572636657859 36 21.74442662203315 26.621516558053276 28.34269655665848 23.291360263255097 37 21.965837795393554 25.699245517921852 28.282668609051203 24.05224807763339 38 20.72142021371396 25.243611698734092 27.446823348908573 26.588144738643376 39 21.753208679772595 22.94343579928349 29.303298695864427 26.000056825079493 40 21.808742280183804 23.346893863666303 29.475013754252195 25.369350101897698 41 19.830196330649642 24.764834574444727 27.35388851435996 28.051080580545673 42 21.06924135935922 24.571061053381996 28.829687487892386 25.5300100993664 43 22.483204314573307 23.543456979540387 29.354854540711294 24.61848416517501 44 21.141719165291242 23.708559665041985 28.276056236165033 26.87366493350174 45 21.19038209700041 22.46842979390577 27.327025749509883 29.01416235958394 46 22.358964027141724 24.012625499479533 27.900080846590363 25.728329626788376 47 19.625264430341495 23.883632569036013 31.031246044845318 25.45985695577717 48 19.725069933592145 22.82090026423662 30.21596113164563 27.238068670525607 49 21.319788300749316 21.68274558120433 31.55853112335433 25.43893499469202 50 19.840166549142072 21.95307798208977 30.867848111728435 27.338907357039723 51 18.911076499471786 22.067606346844787 28.14845810312719 30.87285905055624 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1098.0 1 1774.5 2 2451.0 3 3128.5 4 3806.0 5 3290.5 6 2775.0 7 2679.0 8 2583.0 9 2761.0 10 2939.0 11 3295.5 12 3652.0 13 3749.5 14 3847.0 15 4089.0 16 4331.0 17 4360.0 18 4389.0 19 4466.0 20 4543.0 21 5452.5 22 6362.0 23 6878.5 24 7395.0 25 9178.5 26 12809.0 27 14656.0 28 18457.0 29 22258.0 30 24878.5 31 27499.0 32 31097.0 33 34695.0 34 39624.0 35 44553.0 36 47532.5 37 50512.0 38 54285.5 39 58059.0 40 67354.0 41 76649.0 42 86937.5 43 97226.0 44 112028.0 45 126830.0 46 154186.0 47 181542.0 48 194189.5 49 206837.0 50 201689.0 51 196541.0 52 173558.5 53 150576.0 54 132734.0 55 114892.0 56 105301.0 57 95710.0 58 90877.0 59 86044.0 60 83219.5 61 80395.0 62 72654.0 63 64913.0 64 57152.0 65 49391.0 66 40173.5 67 30956.0 68 26649.0 69 22342.0 70 18417.0 71 14492.0 72 12255.5 73 10019.0 74 8679.5 75 6338.0 76 5336.0 77 3808.0 78 2280.0 79 1729.5 80 1179.0 81 876.0 82 573.0 83 407.0 84 241.0 85 164.5 86 88.0 87 47.0 88 6.0 89 3.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1935765.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.663400375909696 #Duplication Level Percentage of deduplicated Percentage of total 1 66.66779131146775 15.775866379808551 2 13.489450037222689 6.384125141632609 3 6.013200433043537 4.268783081631083 4 3.194186860309827 3.023412902039255 5 1.939437445314553 2.2946842386254866 6 1.2565028505538685 1.783987801567681 7 0.8572169684654065 1.4199267833674332 8 0.6007082018575332 1.137183895171807 9 0.44553054511276446 0.9488490901830577 >10 3.4453305623445862 18.55796761695399 >50 1.7384390352298857 29.700725260779244 >100 0.3410834630157528 10.895410629955704 >500 0.005931885899666314 0.9728128227370881 >1k 0.004448914424749735 1.8252595786676515 >5k 7.414857374582893E-4 1.0110047768792945 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCGTCTTCTGCT 6173 0.31889201426826086 No Hit GCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCGTCTTCTGC 5736 0.29631695996156554 No Hit CCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCGTCTTCTGC 5377 0.2777713203823811 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGC 4146 0.21417889051615252 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCG 3703 0.19129388123041796 No Hit GAATCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCGTCTTC 2760 0.14257929035807548 No Hit TCTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCGTCTTCTGC 2238 0.11561320718165685 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.5497748951964727E-4 0.0 0.0 0.3370760397052328 0.0 2 1.5497748951964727E-4 0.0 0.0 1.1581984383434973 0.0 3 1.5497748951964727E-4 0.0 0.0 1.6406950223813324 0.0 4 1.5497748951964727E-4 0.0 0.0 2.266700761714361 0.0 5 1.5497748951964727E-4 0.0 0.0 3.8669466593310653 0.0 6 1.5497748951964727E-4 0.0 0.0 4.905140861623183 0.0 7 1.5497748951964727E-4 0.0 0.0 5.790682236738447 0.0 8 1.5497748951964727E-4 0.0 0.0 7.291070971941325 0.0 9 1.5497748951964727E-4 0.0 0.0 7.809832288526758 0.0 10 1.5497748951964727E-4 0.0 0.0 9.151524074461518 0.0 11 1.5497748951964727E-4 0.0 0.0 10.966930386694665 0.0 12 1.5497748951964727E-4 0.0 0.0 12.666258559277598 0.0 13 1.5497748951964727E-4 0.0 0.0 13.277179822964047 0.0 14 2.0663665269286303E-4 0.0 0.0 13.530774654981364 0.0 15 2.0663665269286303E-4 0.0 0.0 14.039565753074365 0.0 16 2.0663665269286303E-4 0.0 0.0 14.953158053792686 0.0 17 2.0663665269286303E-4 0.0 0.0 16.01713017850824 0.0 18 2.5829581586607876E-4 0.0 0.0 17.231327149731502 0.0 19 2.5829581586607876E-4 0.0 0.0 18.036745162765108 0.0 20 2.5829581586607876E-4 0.0 0.0 18.70196020694661 0.0 21 2.5829581586607876E-4 0.0 0.0 19.430974317647028 0.0 22 2.5829581586607876E-4 0.0 0.0 20.19258536030975 0.0 23 2.5829581586607876E-4 0.0 0.0 20.920411310257187 0.0 24 2.5829581586607876E-4 0.0 0.0 21.530506027332862 0.0 25 2.5829581586607876E-4 0.0 0.0 22.09204113102572 0.0 26 2.5829581586607876E-4 0.0 0.0 22.57996192719674 0.0 27 2.5829581586607876E-4 0.0 0.0 23.06235519290823 0.0 28 2.5829581586607876E-4 0.0 0.0 23.55084423987416 0.0 29 2.5829581586607876E-4 0.0 0.0 24.08649810281723 0.0 30 2.5829581586607876E-4 0.0 0.0 24.643125586008633 0.0 31 3.0995497903929455E-4 0.0 0.0 25.17836617564632 0.0 32 3.0995497903929455E-4 0.0 0.0 25.769398661511083 0.0 33 3.0995497903929455E-4 0.0 0.0 26.340335732901462 0.0 34 3.0995497903929455E-4 0.0 0.0 26.895516759524014 0.0 35 3.0995497903929455E-4 0.0 0.0 27.495227984801875 0.0 36 3.616141422125103E-4 0.0 0.0 28.088430155519912 0.0 37 3.616141422125103E-4 0.0 0.0 28.682665509501412 0.0 38 4.649324685589418E-4 0.0 0.0 29.260266612941138 0.0 39 4.649324685589418E-4 0.0 0.0 29.842052108597894 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCCGTAT 20 7.0344826E-4 45.000004 18 AACGATC 20 7.0344826E-4 45.000004 26 TCGTTAC 35 1.212502E-7 45.0 20 ATATGCG 35 1.212502E-7 45.0 1 CAACACG 25 3.891799E-5 45.0 40 TCCCGTA 25 3.891799E-5 45.0 18 CTGTCGT 55 6.184564E-11 40.90909 17 ACGCTTA 50 1.0822987E-9 40.5 17 GTCGTGA 45 1.929402E-8 40.0 25 TACGACG 80 0.0 39.375004 1 TCGACGT 40 3.4598634E-7 39.375004 26 TATACGG 200 0.0 39.375 2 TACGGGA 755 0.0 39.33775 4 TCACGAG 35 6.250506E-6 38.571426 23 GCGATAT 70 0.0 38.571426 9 CATACGA 305 0.0 37.622948 18 GCGCGAT 30 1.14021044E-4 37.500004 22 CCTACGG 30 1.14021044E-4 37.500004 2 TGCGCAA 30 1.14021044E-4 37.500004 1 GATTCGT 30 1.14021044E-4 37.500004 26 >>END_MODULE