##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935107.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2105275 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.95060217786275 33.0 31.0 34.0 30.0 34.0 2 32.27871798221135 34.0 31.0 34.0 30.0 34.0 3 32.35507047772856 34.0 31.0 34.0 30.0 34.0 4 35.898689244873 37.0 35.0 37.0 35.0 37.0 5 30.441487216634407 37.0 35.0 37.0 0.0 37.0 6 32.856712780990605 37.0 35.0 37.0 17.0 37.0 7 35.00892804977972 37.0 35.0 37.0 32.0 37.0 8 35.43629454584318 37.0 35.0 37.0 33.0 37.0 9 37.42283407155835 39.0 37.0 39.0 35.0 39.0 10 37.35388820937882 39.0 37.0 39.0 34.0 39.0 11 37.212032157319115 39.0 37.0 39.0 34.0 39.0 12 36.94545320682571 39.0 35.0 39.0 33.0 39.0 13 36.757145266057876 39.0 35.0 39.0 33.0 39.0 14 37.59188134566743 40.0 36.0 41.0 32.0 41.0 15 37.718334184370214 40.0 36.0 41.0 32.0 41.0 16 38.02329481896664 40.0 37.0 41.0 33.0 41.0 17 37.99016043034758 40.0 36.0 41.0 33.0 41.0 18 38.01815724786548 40.0 36.0 41.0 33.0 41.0 19 38.005602118488085 40.0 36.0 41.0 33.0 41.0 20 37.7743933690373 40.0 36.0 41.0 33.0 41.0 21 37.84828110341879 40.0 36.0 41.0 33.0 41.0 22 37.90688627376471 40.0 36.0 41.0 33.0 41.0 23 37.765366994810655 40.0 36.0 41.0 33.0 41.0 24 37.75529135148615 40.0 35.0 41.0 33.0 41.0 25 37.74689007374334 40.0 35.0 41.0 33.0 41.0 26 37.692144731685886 40.0 35.0 41.0 33.0 41.0 27 37.571996532519506 39.0 35.0 41.0 33.0 41.0 28 37.50735984610087 39.0 35.0 41.0 33.0 41.0 29 37.47353148638539 39.0 35.0 41.0 33.0 41.0 30 37.403002458111175 39.0 35.0 41.0 33.0 41.0 31 32.900204011352436 38.0 33.0 40.0 9.0 41.0 32 33.693058151547895 38.0 33.0 40.0 16.0 41.0 33 35.58450748714539 38.0 34.0 40.0 27.0 41.0 34 36.32648703851041 38.0 35.0 40.0 30.0 41.0 35 36.59305458906794 39.0 35.0 40.0 31.0 41.0 36 36.68880027549845 39.0 35.0 40.0 31.0 41.0 37 36.76183776466257 39.0 35.0 41.0 31.0 41.0 38 36.768268278490936 39.0 35.0 41.0 31.0 41.0 39 36.80168529052024 39.0 35.0 41.0 31.0 41.0 40 36.843641329517524 39.0 35.0 41.0 31.0 41.0 41 36.65093538848844 39.0 35.0 41.0 31.0 41.0 42 36.64562871833846 39.0 35.0 41.0 31.0 41.0 43 36.667199297003954 39.0 35.0 41.0 31.0 41.0 44 36.688890999988125 39.0 35.0 41.0 31.0 41.0 45 36.63275961572716 39.0 35.0 41.0 31.0 41.0 46 36.60971037037917 39.0 35.0 41.0 31.0 41.0 47 36.448398902756175 38.0 35.0 40.0 31.0 41.0 48 36.49215660661909 38.0 35.0 40.0 31.0 41.0 49 36.53260215411288 39.0 35.0 40.0 31.0 41.0 50 36.326806711712244 38.0 35.0 40.0 31.0 41.0 51 35.72904347413046 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 5.0 10 7.0 11 12.0 12 19.0 13 29.0 14 30.0 15 64.0 16 107.0 17 193.0 18 421.0 19 750.0 20 1602.0 21 3199.0 22 5435.0 23 8472.0 24 11086.0 25 13322.0 26 15167.0 27 17406.0 28 20319.0 29 26440.0 30 36450.0 31 53691.0 32 77258.0 33 92904.0 34 170404.0 35 195234.0 36 234879.0 37 237778.0 38 351571.0 39 530476.0 40 544.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 47.957392739665835 19.226229352459892 22.412131431760695 10.404246476113572 2 29.557041241643017 30.637232665566255 23.082210162567833 16.72351593022289 3 29.591431048200356 30.664972509529637 23.81836102171925 15.92523542055076 4 27.047772856277685 23.32588379190367 31.68982674472456 17.936516607094084 5 26.9270760351973 36.61170155917873 20.034959803351107 16.42626260227286 6 24.99640189523934 36.86416263908516 23.742408948949663 14.397026516725845 7 74.19292016482407 5.430739452090582 15.259146667299998 5.117193715785349 8 73.7801949864032 10.970300792058046 9.116576219258766 6.1329280022799875 9 68.7337283727779 6.034033558561233 10.644405125221171 14.587832943439693 10 45.57827362221087 20.826637850162093 17.86621700252936 15.72887152509767 11 35.11631497072829 21.831019700514183 23.936920354823005 19.11574497393452 12 28.646091365736066 19.903053045326622 28.138651720084074 23.31220386885324 13 28.111909370509792 20.90515490850364 33.465651755708876 17.517283965277695 14 21.24169051549085 26.771466910498624 30.950588402940234 21.036254171070286 15 18.40529147023548 22.62497773450024 37.36504732160882 21.604683473655463 16 23.21967438933156 24.455237439289405 26.53928821650378 25.785799954875255 17 23.800928619776514 25.17761337592476 28.489912244243627 22.5315457600551 18 24.452529954519004 22.88157129116149 29.53775635012053 23.128142404198975 19 23.036420420135137 26.16855280189049 26.629917706712902 24.165109071261472 20 23.18134210495066 28.30485328520027 30.353849259597915 18.159955350251156 21 22.02505610905939 29.60477847312109 29.963686454263694 18.40647896355583 22 19.873318212585055 22.01740865207633 33.371222286874634 24.738050848463978 23 20.686846136490484 26.839344028689837 30.64996259396041 21.82384724085927 24 21.939034092933227 26.192587666694372 27.353101138806096 24.515277101566305 25 21.022526748287042 30.785526831411573 24.66984123214307 23.522105188158314 26 19.759651351961143 24.851812708553513 28.831292823977865 26.55724311550747 27 23.265511631497073 25.16683093657598 28.02132738003349 23.546330051893456 28 17.86844948997162 26.716937217228153 29.446794361781713 25.96781893101851 29 22.790514303357043 26.29480709171011 26.779731864008266 24.134946740924583 30 25.180130861763907 26.669342484948523 27.06924273550961 21.081283917777963 31 26.241844889622495 24.167341558703733 26.128510527128284 23.462303024545488 32 29.522176437757537 26.05251095462588 24.0098324446925 20.415480162924084 33 25.70704539786964 22.811034187932695 24.27663844390875 27.20528197028892 34 22.32705941029082 25.084418900143685 30.404578974243268 22.183942715322228 35 26.59918537958224 25.51771146287302 25.421192005794968 22.46191115174977 36 23.35694861716403 29.963733953996506 25.428506964648324 21.25081046419114 37 25.378537245727994 25.606298464571136 28.45409744570187 20.561066843999 38 24.03467480495422 24.387122822434122 26.167412808302952 25.4107895643087 39 24.436665043759128 24.518222085000772 27.026207977580125 24.018904893659972 40 25.20497322202563 21.442234387431572 27.926422913871107 25.426369476671695 41 21.42290199617627 25.79572739903338 26.662027526095166 26.119343078695184 42 23.958485233520562 22.882853783947464 30.369571671159353 22.789089311372624 43 22.364916697343578 25.68391302798922 27.99757751362649 23.953592761040717 44 24.09932194131408 21.84118464333638 28.970087043260385 25.089406372089158 45 21.86384201588866 20.39595777273753 27.867238246784865 29.872961964588953 46 25.97470639227654 23.831660946907174 26.69456484307276 23.499067817743523 47 18.74372706653525 23.64802697984824 34.48513852109582 23.123107432520694 48 20.96353208013205 25.708327890655614 28.859032667941243 24.469107361271092 49 24.347033047939107 20.76146821674128 31.691964232701192 23.199534502618423 50 22.03294106470651 22.466328626901475 28.75130327391908 26.749427034472934 51 20.967997055016564 22.038213535048865 26.74291957107741 30.25086983885716 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 949.0 1 1520.5 2 2092.0 3 3089.5 4 4087.0 5 3253.0 6 2419.0 7 2381.0 8 2343.0 9 2471.0 10 2599.0 11 2748.5 12 2898.0 13 3009.5 14 3121.0 15 3279.5 16 3438.0 17 3228.5 18 3019.0 19 3418.5 20 3818.0 21 4679.0 22 5540.0 23 6081.0 24 6622.0 25 8165.0 26 11669.5 27 13631.0 28 16644.0 29 19657.0 30 22819.0 31 25981.0 32 30052.5 33 34124.0 34 39100.0 35 44076.0 36 48531.5 37 52987.0 38 57535.5 39 62084.0 40 67110.5 41 72137.0 42 84925.5 43 97714.0 44 117109.0 45 136504.0 46 204607.5 47 272711.0 48 252659.5 49 232608.0 50 226501.5 51 220395.0 52 193698.5 53 167002.0 54 150619.0 55 134236.0 56 126634.0 57 119032.0 58 108361.5 59 97691.0 60 84881.0 61 72071.0 62 63709.5 63 55348.0 64 47768.0 65 40188.0 66 34011.0 67 27834.0 68 23697.0 69 19560.0 70 16087.0 71 12614.0 72 10955.5 73 9297.0 74 7490.0 75 4738.5 76 3794.0 77 2769.5 78 1745.0 79 1444.5 80 1144.0 81 891.5 82 639.0 83 364.0 84 89.0 85 53.0 86 17.0 87 22.5 88 28.0 89 14.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2105275.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.315496223290054 #Duplication Level Percentage of deduplicated Percentage of total 1 67.57001022577313 16.42998328452457 2 13.318380354865262 6.476860544381335 3 5.702034751520526 4.159434133969979 4 2.958453158465452 2.877450264057889 5 1.7328269006347838 2.106727297900025 6 1.1082846828891812 1.616909521267326 7 0.7875433008871686 1.3404654310879531 8 0.5990103557388688 1.1652187234144078 9 0.45783429204109377 1.0019221199116102 >10 4.153276145841201 23.48878666456369 >50 1.4608726653797255 24.24981904176424 >100 0.1380820679368477 5.235403276688013 >500 0.006805312111969058 1.120903188888326 >1k 0.0043905239432058445 1.9033308731935352 >5k 0.0013171571829617532 1.9115512213572001 >10k+ 8.781047886411689E-4 4.915234413029899 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGC 31789 1.509969006424339 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCG 29323 1.3928346653050077 No Hit GAATCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTTC 20639 0.9803469855482062 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGTGCTGAT 10331 0.4907197397014642 No Hit GCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTTCTGC 8344 0.3963377706000404 No Hit CCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTTCTGC 6065 0.2880858795169277 No Hit CTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTTCTGCT 5718 0.2716034722304687 Illumina Single End Adapter 1 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCT 5344 0.25383857215803163 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTC 5249 0.2493260975407013 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGTGCTGATCGTA 5091 0.24182113975608888 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 4669 0.22177625250857963 No Hit GAACTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTTCT 3900 0.18524895797461138 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 2812 0.1335692486729762 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCC 2178 0.10345441806889837 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.4249919844200876E-4 0.0 0.0 0.2845708992886915 0.0 2 1.4249919844200876E-4 0.0 0.0 1.1742883946277802 0.0 3 1.4249919844200876E-4 0.0 0.0 1.6229708707888517 0.0 4 1.4249919844200876E-4 0.0 0.0 2.3350393654035697 0.0 5 1.4249919844200876E-4 0.0 0.0 4.723658429421334 0.0 6 1.4249919844200876E-4 0.0 0.0 5.702912921114819 0.0 7 1.4249919844200876E-4 0.0 0.0 6.868128866775124 0.0 8 1.4249919844200876E-4 0.0 0.0 8.506252152331642 0.0 9 1.4249919844200876E-4 0.0 0.0 8.9935519112705 0.0 10 1.4249919844200876E-4 0.0 0.0 11.733763997577514 0.0 11 1.4249919844200876E-4 0.0 0.0 13.38870218855019 0.0 12 1.4249919844200876E-4 0.0 0.0 16.571184287088386 0.0 13 1.4249919844200876E-4 0.0 0.0 17.205210720689696 0.0 14 1.8999893125601168E-4 0.0 0.0 17.54507130897389 0.0 15 1.8999893125601168E-4 0.0 0.0 18.274477206065715 0.0 16 1.8999893125601168E-4 0.0 0.0 19.209081948914037 0.0 17 1.8999893125601168E-4 0.0 0.0 20.143639192029546 0.0 18 1.8999893125601168E-4 0.0 0.0 21.09382384724086 0.0 19 1.8999893125601168E-4 0.0 0.0 22.43887378133498 0.0 20 1.8999893125601168E-4 0.0 0.0 23.107907518020212 0.0 21 1.8999893125601168E-4 0.0 0.0 23.80097611950933 0.0 22 2.374986640700146E-4 0.0 0.0 24.568381802852358 0.0 23 2.374986640700146E-4 0.0 0.0 25.239030530453267 0.0 24 2.374986640700146E-4 0.0 0.0 25.830877201315744 0.0 25 2.374986640700146E-4 0.0 0.0 26.368906674899954 0.0 26 2.374986640700146E-4 0.0 0.0 26.85976891379986 0.0 27 2.374986640700146E-4 0.0 0.0 27.472942964695825 0.0 28 2.374986640700146E-4 0.0 0.0 27.98028761088219 0.0 29 2.374986640700146E-4 0.0 0.0 28.568904299913314 0.0 30 2.374986640700146E-4 0.0 0.0 29.24145301682678 0.0 31 2.374986640700146E-4 0.0 0.0 29.725142796071772 0.0 32 2.374986640700146E-4 0.0 0.0 30.282742159575353 0.0 33 2.374986640700146E-4 0.0 0.0 30.849746470176104 0.0 34 2.374986640700146E-4 0.0 0.0 31.486480388547815 0.0 35 2.374986640700146E-4 0.0 0.0 32.126444288750875 0.0 36 2.374986640700146E-4 0.0 0.0 32.68252366080441 0.0 37 2.374986640700146E-4 0.0 0.0 33.295745211433186 0.0 38 2.374986640700146E-4 0.0 0.0 34.05479094180095 0.0 39 2.374986640700146E-4 0.0 0.0 35.29814394794029 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCACT 20 7.034626E-4 45.0 21 ACACGAA 25 3.8919163E-5 45.0 31 CTACCGT 25 3.8919163E-5 45.0 36 CGTACAA 20 7.034626E-4 45.0 30 CGGTCGA 20 7.034626E-4 45.0 13 TCGAATA 40 6.8193913E-9 45.0 44 CGATCGA 290 0.0 42.672413 41 GCTAACG 90 0.0 42.5 1 TAATACG 1150 0.0 42.45652 4 TACGGCT 4385 0.0 41.92132 7 TTGCACG 180 0.0 41.25 1 AATACGG 1190 0.0 41.02941 5 CTAACGC 315 0.0 40.714283 29 ACGGGTA 255 0.0 40.588234 5 ATAATAC 1820 0.0 40.54945 3 TCTAACG 315 0.0 39.999996 28 CGTAAGG 220 0.0 39.886368 2 ACGGCTG 4645 0.0 39.865444 8 TAGGTCG 85 0.0 39.705883 1 CGGTCTA 85 0.0 39.705883 31 >>END_MODULE