##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935103.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1414579 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.775162786949334 33.0 31.0 34.0 30.0 34.0 2 32.09462956823196 33.0 31.0 34.0 30.0 34.0 3 32.16298700885564 34.0 31.0 34.0 30.0 34.0 4 35.73319835795668 37.0 35.0 37.0 33.0 37.0 5 30.26662066947127 37.0 35.0 37.0 0.0 37.0 6 32.72784552859897 37.0 35.0 37.0 17.0 37.0 7 34.946031292702635 37.0 35.0 37.0 32.0 37.0 8 35.511948077838 37.0 35.0 37.0 33.0 37.0 9 37.340169053831566 39.0 37.0 39.0 34.0 39.0 10 37.25159429059812 39.0 37.0 39.0 34.0 39.0 11 37.169661786298256 39.0 37.0 39.0 34.0 39.0 12 37.036153512811936 39.0 37.0 39.0 33.0 39.0 13 36.95586602091506 39.0 37.0 39.0 33.0 39.0 14 37.97930550361627 40.0 37.0 41.0 33.0 41.0 15 38.12342824260787 40.0 37.0 41.0 33.0 41.0 16 38.22640163610516 40.0 37.0 41.0 33.0 41.0 17 38.23407388346639 40.0 37.0 41.0 34.0 41.0 18 38.189134717820636 40.0 37.0 41.0 34.0 41.0 19 38.1853597430755 40.0 37.0 41.0 34.0 41.0 20 38.095991810991116 40.0 37.0 41.0 34.0 41.0 21 38.035624733577976 40.0 37.0 41.0 34.0 41.0 22 38.03635852080372 40.0 37.0 41.0 34.0 41.0 23 37.976011237265645 40.0 36.0 41.0 34.0 41.0 24 37.94765792507877 40.0 36.0 41.0 33.0 41.0 25 37.880094360230146 40.0 36.0 41.0 33.0 41.0 26 37.83983079064513 40.0 36.0 41.0 33.0 41.0 27 37.820902897611234 40.0 36.0 41.0 33.0 41.0 28 37.78565141996311 40.0 36.0 41.0 33.0 41.0 29 37.80057882946092 40.0 36.0 41.0 33.0 41.0 30 37.64545988594487 40.0 36.0 41.0 33.0 41.0 31 33.10953647693059 38.0 33.0 40.0 9.0 41.0 32 34.01811280953556 38.0 33.0 40.0 16.0 41.0 33 35.926409200193135 38.0 34.0 40.0 29.0 41.0 34 36.808386806251185 38.0 35.0 40.0 31.0 41.0 35 36.987349593059136 39.0 35.0 40.0 32.0 41.0 36 37.1416202276437 39.0 35.0 41.0 32.0 41.0 37 37.25309296971042 39.0 35.0 41.0 32.0 41.0 38 37.200444089725636 39.0 35.0 41.0 32.0 41.0 39 37.19412560203425 39.0 35.0 41.0 32.0 41.0 40 37.15097636823394 39.0 35.0 41.0 32.0 41.0 41 37.07930840200512 39.0 35.0 41.0 32.0 41.0 42 37.041232762539245 39.0 35.0 41.0 32.0 41.0 43 37.03882073747737 39.0 35.0 41.0 32.0 41.0 44 36.945947168733596 39.0 35.0 41.0 32.0 41.0 45 36.925386987930686 39.0 35.0 41.0 32.0 41.0 46 36.862547796906355 39.0 35.0 41.0 32.0 41.0 47 36.782712029515494 39.0 35.0 40.0 31.0 41.0 48 36.81149373771277 39.0 35.0 41.0 32.0 41.0 49 36.81220066182235 39.0 35.0 41.0 32.0 41.0 50 36.6182150307618 39.0 35.0 40.0 31.0 41.0 51 36.01127331877541 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 6.0 10 19.0 11 20.0 12 15.0 13 18.0 14 27.0 15 37.0 16 81.0 17 143.0 18 294.0 19 502.0 20 855.0 21 1427.0 22 2363.0 23 3732.0 24 5222.0 25 6764.0 26 8293.0 27 10076.0 28 12732.0 29 16768.0 30 22623.0 31 32253.0 32 46119.0 33 57854.0 34 100258.0 35 132582.0 36 171307.0 37 167864.0 38 262133.0 39 351965.0 40 226.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.57853396664308 21.63746245349323 24.234843016897607 11.549160562966083 2 32.46937781488344 23.861799164274316 24.482619917304017 19.186203103538226 3 31.766907327197703 24.373117372730686 26.41563320252881 17.444342097542805 4 28.22238984178331 25.223052229673986 26.066412692398234 20.488145236144465 5 21.73784567705303 37.952139823933486 21.69444053672506 18.615573962288426 6 25.220224533235687 31.976722402919876 26.291426636476295 16.511626427368142 7 75.60482659505054 6.195341511502716 11.310361598751289 6.889470294695453 8 73.63491187130587 5.266867385985512 11.959530008574989 9.138690734133618 9 66.84794557249896 7.438538250603183 15.463752819743542 10.24976335715432 10 37.069191611072974 23.6585584827712 21.77312119012088 17.49912871603495 11 26.50661433543125 23.807295315426003 27.26146789963657 22.424622449506177 12 23.792449909124905 20.45576811192588 33.565675724014 22.186106254935215 13 22.50040471405273 23.674464275236662 34.59516930478962 19.229961705920985 14 17.970788481944098 27.0638119185991 32.54303930710126 22.422360292355535 15 16.542943165422365 25.906223689168296 35.95147390142226 21.599359243987077 16 19.205714208962526 26.889484433177646 30.661631481875528 23.243169875984304 17 19.323487765617898 26.789101209617844 27.53391645146718 26.35349457329707 18 20.075513633384915 25.0661150773481 31.98789180385118 22.8704794854158 19 19.82695911645797 26.938827736026056 28.352110415890525 24.88210273162545 20 20.8397692882476 28.132257017812368 29.481421680938286 21.546552013001747 21 20.830932736877898 28.31909705997332 30.6186504960133 20.23131970713548 22 19.550975944079475 24.482619917304017 29.383512691762004 26.582891446854507 23 18.717865880944082 26.279055464558716 29.909959076163297 25.093119578333905 24 21.425809375086153 24.33162092749857 29.190522409847734 25.052047287567536 25 19.316842678987882 26.900512449287035 26.412734813679545 27.369910058045537 26 18.412545358018182 25.87695703103185 27.65176070053352 28.058736910416453 27 21.312277363088242 24.50997788034461 27.54642900820668 26.631315748360468 28 17.519488130390737 24.084975105667482 29.492096234992886 28.9034405289489 29 19.496542787642117 22.82926580982752 27.899325523707052 29.77486587882331 30 21.48271676590703 22.826367420978254 28.39593971068424 27.294976102430475 31 22.57781290405131 25.244472030194142 27.23128224015767 24.946432825596872 32 21.638381454835677 23.446905404364124 26.79016159578221 28.12455154501799 33 20.338065247681467 22.178118012497006 30.871658634830574 26.612158104990957 34 18.07852371624349 20.354041732557885 34.858215765962875 26.70921878523575 35 19.4043598837534 20.869389408438835 28.993219890865056 30.73303081694271 36 18.982184805514574 21.23458640344583 32.95220698172389 26.831021809315704 37 18.815067946010792 21.904609074502023 34.781231730430044 24.49909124905714 38 20.670036809538388 22.673106274022164 30.390314008620233 26.26654290781922 39 22.01842385614377 20.00305391215337 33.84427451559793 24.134247716104934 40 21.628696594534485 19.39757341230147 34.3375661592601 24.63616383390394 41 17.610539955704134 21.46235735155124 29.901617371670298 31.025485321074324 42 20.254506817929574 19.704166398624608 32.271792526256924 27.769534257188887 43 22.108698064936636 19.324972306248007 32.57336635140208 25.992963277413278 44 20.880346732137266 19.802004695389936 30.81333739579055 28.50431117668225 45 20.97769018202589 18.21382899081635 30.066825536078223 30.74165529107954 46 22.608776180050743 18.49002424042772 32.31456143488628 26.58663814463526 47 17.51934674556882 19.823424495910093 35.75494899896011 26.902279759560972 48 17.536807771075352 19.721132577254433 33.30757773160778 29.43448192006243 49 21.36275174451197 17.142344117931906 35.97034877514794 25.52455536240818 50 19.697097157528848 17.426386225159572 34.7821507317725 28.09436588553909 51 18.425199299579592 17.523234828171493 30.331780692347333 33.719785179901585 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1338.0 1 1600.0 2 1862.0 3 2343.5 4 2825.0 5 2351.0 6 1877.0 7 2003.5 8 2130.0 9 2363.5 10 2597.0 11 2752.5 12 2908.0 13 3079.0 14 3250.0 15 3323.0 16 3396.0 17 3396.5 18 3397.0 19 3352.0 20 3307.0 21 3764.0 22 4221.0 23 4557.5 24 4894.0 25 5754.0 26 8096.5 27 9579.0 28 11135.0 29 12691.0 30 14424.0 31 16157.0 32 19294.0 33 22431.0 34 25327.0 35 28223.0 36 29560.5 37 30898.0 38 34377.5 39 37857.0 40 43223.0 41 48589.0 42 56652.0 43 64715.0 44 81201.5 45 97688.0 46 122693.0 47 147698.0 48 174860.0 49 202022.0 50 196602.0 51 191182.0 52 157709.5 53 124237.0 54 105097.0 55 85957.0 56 73472.0 57 60987.0 58 55238.5 59 49490.0 60 43604.0 61 37718.0 62 32960.5 63 28203.0 64 25837.5 65 23472.0 66 20048.0 67 16624.0 68 14147.0 69 11670.0 70 9712.0 71 7754.0 72 6797.0 73 5840.0 74 4994.0 75 3195.0 76 2242.0 77 1681.0 78 1120.0 79 761.5 80 403.0 81 286.5 82 170.0 83 124.5 84 79.0 85 80.5 86 82.0 87 52.0 88 22.0 89 17.0 90 12.0 91 7.5 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1414579.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.029937111021532 #Duplication Level Percentage of deduplicated Percentage of total 1 64.86007312867295 18.180237708129603 2 13.949568012753177 7.820110282467782 3 6.511685729728798 5.475664244731036 4 3.4298636834540304 3.8455545338637256 5 2.107977351607434 2.954323629850704 6 1.3828461348436285 2.325665411633166 7 0.9612875477942033 1.8861380657195732 8 0.7065824123825482 1.5844368466269365 9 0.5474711881772253 1.3811024677233472 >10 4.771471964160792 31.7532615958975 >50 0.6658756563780824 11.758939725255772 >100 0.09065693904604474 4.947585206356771 >500 0.009854015096903073 2.055377812555449 >1k 0.003941606038761229 1.9648606940681732 >5k 8.446298654488348E-4 2.0667417751205477 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCCGTCTTCTGC 9861 0.6970978644529574 No Hit CTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCCGTCTTCTGCT 8765 0.6196189820434207 No Hit CCTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCCGTCTTCTGC 7563 0.5346467040723777 No Hit TCTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCCGTCTTCTGC 3159 0.22331732621507883 No Hit ACTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCCGTCTTCTGC 2574 0.18196226580487904 No Hit TGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCCGTCTTCTGCTT 2169 0.15333183936704844 Illumina Single End Adapter 1 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCC 2100 0.14845406301097358 No Hit GCCTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCCGTCTTCTG 2017 0.14258659290149223 No Hit ACCTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCCGTCTTCTG 1836 0.12979126651816547 No Hit GGCTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCCGTCTTCTG 1702 0.1203184834498462 No Hit AGCTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCCGTCTTCTG 1688 0.11932878969643972 No Hit GGCCTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCCGTCTTCT 1634 0.11551139950472897 No Hit CGTTCTGTCTCTTATACACATCTGACGCCCTGTTCTTCGTATGCCGTCTTC 1448 0.10236261106661418 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.8276964383042587E-4 0.0 0.0 0.6515719517962588 0.0 2 2.8276964383042587E-4 0.0 0.0 2.376820241216645 0.0 3 2.8276964383042587E-4 0.0 0.0 3.3540721302945964 0.0 4 2.8276964383042587E-4 0.0 0.0 4.605186419422315 0.0 5 2.8276964383042587E-4 0.0 0.0 7.620500516408062 0.0 6 2.8276964383042587E-4 0.0 0.0 9.611340193796176 0.0 7 2.8276964383042587E-4 0.0 0.0 11.298768043354242 0.0 8 2.8276964383042587E-4 0.0 0.0 14.13622003437065 0.0 9 2.8276964383042587E-4 0.0 0.0 15.08957788854493 0.0 10 2.8276964383042587E-4 0.0 0.0 17.01439085409864 0.0 11 2.8276964383042587E-4 0.0 0.0 20.07572571061779 0.0 12 2.8276964383042587E-4 0.0 0.0 22.509241265422432 0.0 13 2.8276964383042587E-4 0.0 0.0 23.48373615047304 0.0 14 2.8276964383042587E-4 0.0 0.0 23.90633538317761 0.0 15 2.8276964383042587E-4 0.0 0.0 24.624499586095933 0.0 16 2.8276964383042587E-4 0.0 0.0 26.029723331111235 0.0 17 2.8276964383042587E-4 0.0 0.0 27.591813536041464 0.0 18 2.8276964383042587E-4 0.0 0.0 29.41723297178878 0.0 19 2.8276964383042587E-4 0.0 0.0 30.486314302700663 0.0 20 2.8276964383042587E-4 0.0 0.0 31.521675353585767 0.0 21 3.534620547880323E-4 0.0 0.0 32.5916756858401 0.0 22 3.534620547880323E-4 0.0 0.0 33.69737568562802 0.0 23 3.534620547880323E-4 0.0 0.0 34.65886316706243 0.0 24 3.534620547880323E-4 0.0 0.0 35.46857404217085 0.0 25 3.534620547880323E-4 0.0 0.0 36.20200780585602 0.0 26 3.534620547880323E-4 0.0 0.0 36.84919682817291 0.0 27 3.534620547880323E-4 0.0 0.0 37.49574961879117 0.0 28 4.241544657456388E-4 0.0 0.0 38.15007857461478 0.0 29 4.241544657456388E-4 0.0 0.0 38.85028690514987 0.0 30 4.241544657456388E-4 0.0 0.0 39.62903450425886 0.0 31 5.655392876608517E-4 0.0 0.0 40.28300999802768 0.0 32 5.655392876608517E-4 0.0 0.0 40.99537742324748 0.0 33 6.362316986184582E-4 0.0 0.0 41.669500254139216 0.0 34 6.362316986184582E-4 0.0 0.0 42.371122432893465 0.0 35 6.362316986184582E-4 0.0 0.0 43.12753123013985 0.0 36 6.362316986184582E-4 0.0 0.0 43.79720043914126 0.0 37 6.362316986184582E-4 0.0 0.0 44.48864291071761 0.0 38 6.362316986184582E-4 0.0 0.0 45.19464801895122 0.0 39 6.362316986184582E-4 0.0 0.0 46.10877158504403 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGACCGA 20 7.033838E-4 45.000004 42 ATATACG 20 7.033838E-4 45.000004 1 CTAGCGA 20 7.033838E-4 45.000004 16 CTTACGG 55 1.8189894E-12 45.0 2 GTCAACG 25 3.891265E-5 44.999996 1 CGTATGG 125 0.0 43.199997 2 ACGCATC 170 0.0 42.35294 29 GCGTAAG 85 0.0 42.35294 1 TACGCAT 185 0.0 41.351353 28 ATTTACG 55 6.184564E-11 40.909092 1 CGTTATG 55 6.184564E-11 40.909092 1 TTACGCC 110 0.0 40.909092 30 TACACGG 110 0.0 40.909092 2 TAACGAC 50 1.0822987E-9 40.499996 23 TTATTCG 95 0.0 40.263157 29 TAGTACG 95 0.0 40.263157 1 CGGGTAT 85 0.0 39.705883 6 GTTTACG 40 3.458972E-7 39.375004 1 ACGGATC 40 3.458972E-7 39.375004 5 TCACGCC 115 0.0 39.130436 30 >>END_MODULE