##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935102.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2267181 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.78025001091664 33.0 31.0 34.0 30.0 34.0 2 32.10434411720988 33.0 31.0 34.0 30.0 34.0 3 32.1801038382026 34.0 31.0 34.0 30.0 34.0 4 35.765879742287886 37.0 35.0 37.0 35.0 37.0 5 30.26665758049313 37.0 35.0 37.0 0.0 37.0 6 32.70828398791274 37.0 35.0 37.0 17.0 37.0 7 34.93564519109855 37.0 35.0 37.0 32.0 37.0 8 35.48032953698888 37.0 35.0 37.0 33.0 37.0 9 37.368675019771246 39.0 37.0 39.0 34.0 39.0 10 37.266499675147244 39.0 37.0 39.0 34.0 39.0 11 37.13186640149154 39.0 37.0 39.0 34.0 39.0 12 36.85606310215197 39.0 35.0 39.0 33.0 39.0 13 36.66696571645581 39.0 35.0 39.0 33.0 39.0 14 37.29729959804709 40.0 36.0 41.0 31.0 41.0 15 37.49619505456335 40.0 36.0 41.0 32.0 41.0 16 37.77682108309835 40.0 36.0 41.0 33.0 41.0 17 37.84553990175465 40.0 36.0 41.0 33.0 41.0 18 37.845580039705695 40.0 36.0 41.0 33.0 41.0 19 37.85684557165926 40.0 36.0 41.0 33.0 41.0 20 37.69688789734918 40.0 36.0 41.0 33.0 41.0 21 37.668315851270805 39.0 36.0 41.0 33.0 41.0 22 37.75536536341827 39.0 35.0 41.0 33.0 41.0 23 37.689778187096664 39.0 35.0 41.0 33.0 41.0 24 37.67639681172346 39.0 35.0 41.0 33.0 41.0 25 37.59333418902152 39.0 35.0 41.0 33.0 41.0 26 37.569173788947595 39.0 35.0 41.0 33.0 41.0 27 37.53346909664469 39.0 35.0 41.0 33.0 41.0 28 37.451318619907276 39.0 35.0 41.0 33.0 41.0 29 37.44098596450835 39.0 35.0 41.0 33.0 41.0 30 37.31907509810642 39.0 35.0 41.0 32.0 41.0 31 32.78545118365054 38.0 32.0 40.0 9.0 41.0 32 33.618884861861495 38.0 32.0 40.0 16.0 41.0 33 35.53306639390503 38.0 33.0 40.0 28.0 41.0 34 36.31817000936405 38.0 35.0 40.0 30.0 41.0 35 36.52714891312163 39.0 35.0 40.0 31.0 41.0 36 36.713421204570786 39.0 35.0 40.0 31.0 41.0 37 36.79389823750287 39.0 35.0 40.0 31.0 41.0 38 36.805446940495706 39.0 35.0 41.0 31.0 41.0 39 36.786490359613985 39.0 35.0 40.0 31.0 41.0 40 36.75159857108894 39.0 35.0 40.0 31.0 41.0 41 36.598730317517656 39.0 35.0 40.0 31.0 41.0 42 36.591428297961215 39.0 35.0 40.0 31.0 41.0 43 36.61113559085049 39.0 35.0 40.0 31.0 41.0 44 36.610849773352896 39.0 35.0 40.0 31.0 41.0 45 36.6164968743122 39.0 35.0 40.0 31.0 41.0 46 36.57702186106888 38.0 35.0 40.0 31.0 41.0 47 36.44309078101836 38.0 35.0 40.0 31.0 41.0 48 36.45810546224585 38.0 35.0 40.0 31.0 41.0 49 36.469845592389845 38.0 35.0 40.0 31.0 41.0 50 36.27007768678372 38.0 35.0 40.0 31.0 41.0 51 35.607062250433465 37.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 12.0 10 21.0 11 29.0 12 30.0 13 21.0 14 36.0 15 74.0 16 107.0 17 271.0 18 468.0 19 974.0 20 1629.0 21 2781.0 22 4478.0 23 6717.0 24 9516.0 25 12109.0 26 15378.0 27 19180.0 28 24041.0 29 31855.0 30 43153.0 31 63403.0 32 85973.0 33 110030.0 34 198319.0 35 208214.0 36 261576.0 37 258692.0 38 403853.0 39 503935.0 40 305.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.01559425559759 20.412750459711862 24.079242019053616 10.49241326563693 2 31.742855996058537 25.459017167133986 23.63573971376789 19.162387123039583 3 31.23195721911925 25.945744958166113 25.69384623459706 17.12845158811758 4 28.466408284120238 23.75743268843555 27.362879276070153 20.413279751374063 5 23.244725498317074 37.52338256186869 21.57926517556384 17.652626764250407 6 25.367582032488805 32.73893879668187 25.941334194314436 15.952144976514887 7 74.90046008677737 5.561796786405672 12.725538896100488 6.812204230716472 8 73.61436956290653 6.674147322159104 12.003673284135672 7.707809830798689 9 67.53633697530105 6.713226689884928 14.45402903429413 11.296407300519897 10 42.88819463465863 22.305806197211428 19.408110777216287 15.39788839091365 11 32.56043518360466 22.353574769725046 25.157806103703233 19.92818394296706 12 28.209834150868414 19.297135958708193 30.446047316028142 22.04698257439525 13 27.424629969993575 20.67263266585244 34.119640205171095 17.783097158982898 14 20.419763574236022 24.423413922399668 33.828882652068806 21.327939851295508 15 17.73568144757741 23.984587026796714 38.367338117247805 19.912393408378072 16 24.38940693310327 25.353555803440486 28.37920748277266 21.877829780683587 17 24.039986220773727 24.35187133272553 27.122669076708032 24.485473369792707 18 25.1113166527066 22.51655249404437 30.802040066496676 21.570090786752356 19 23.06211987485781 25.447990257504806 27.75384938388245 23.736040483754937 20 20.953201354457363 30.389324892895626 29.405018831756262 19.252454920890745 21 20.37768488709106 28.006542044944798 32.94770024978156 18.66807281818258 22 19.309838958601013 22.50759864342547 33.382160489171355 24.800401908802165 23 18.541307465085495 26.357269225527208 32.48205590996044 22.619367399426864 24 21.29283017103619 26.197070282434442 27.781328442678376 24.728771103850995 25 20.99267769092984 27.994500659629733 25.1382223122018 25.874599337238624 26 18.27264783888009 24.749942770339025 27.98484108679457 28.992568303986317 27 20.969256534877452 23.33990978223618 30.3834585769729 25.307375105913465 28 16.721999699185904 24.901761262113613 28.083730412349077 30.292508626351406 29 19.21721291771588 26.409801423000633 25.842885945145095 28.530099714138395 30 22.619014538318734 23.951903266655815 28.4992684748152 24.92981372021025 31 23.67014367181094 26.11194254009715 24.66904936129934 25.548864426792566 32 23.41339310800505 27.880305983509917 23.228229241511816 25.47807166697321 33 21.81087438541519 25.2584156271599 24.570777542684063 28.35993244474085 34 18.464383743512318 25.94989107618668 27.869543719711835 27.716181460589162 35 20.558305666817073 28.331747663728656 25.10955234716593 26.00039432228834 36 20.941556937888947 27.462650754394996 24.53928468878312 27.05650761893294 37 18.059828483036863 30.08621720100865 27.467282056439252 24.38667225951523 38 21.525939040597112 27.076708917373605 23.976471221309637 27.420880820719653 39 20.353116932437242 27.461459848155044 24.200714455528693 27.98470876387902 40 23.396323451899075 23.074999305304694 28.380133743181513 25.148543499614718 41 20.694068978171572 26.110883956772753 24.188187886189944 29.006859178865735 42 21.551918439683465 23.610289606343738 29.748220367054945 25.089571586917852 43 20.403664286177417 23.593837457176996 29.332638196950313 26.669860059695278 44 20.544720514153923 22.56820253874746 27.187683735881695 29.699393211216922 45 19.876401575348417 20.585167218673764 26.22419648012223 33.31423472585559 46 22.063655261754576 22.491543463005378 27.423968355415823 28.020832919824223 47 16.717941796442364 24.11607189721509 33.26324629573025 25.902740010612295 48 18.209706238716713 26.435957252641057 28.012981760168245 27.341354748473982 49 22.714375252791903 21.9210993740685 30.266793873096148 25.097731500043448 50 19.72969956964177 22.483736410987916 28.926847922596387 28.859716096773923 51 18.83215323346482 21.822298263791026 25.029364660342512 34.31618384240164 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1531.0 1 2230.5 2 2930.0 3 3939.5 4 4949.0 5 4019.0 6 3089.0 7 3129.0 8 3169.0 9 3314.0 10 3459.0 11 3910.0 12 4361.0 13 4593.5 14 4826.0 15 4720.0 16 4614.0 17 4849.5 18 5085.0 19 5247.0 20 5409.0 21 5669.5 22 5930.0 23 6711.0 24 7492.0 25 9018.5 26 11867.5 27 13190.0 28 14804.5 29 16419.0 30 20186.5 31 23954.0 32 25895.5 33 27837.0 34 32549.0 35 37261.0 36 40608.0 37 43955.0 38 50305.5 39 56656.0 40 63607.5 41 70559.0 42 83431.5 43 96304.0 44 115776.0 45 135248.0 46 193627.5 47 252007.0 48 278820.5 49 305634.0 50 303327.0 51 301020.0 52 260116.0 53 219212.0 54 189688.0 55 160164.0 56 141955.5 57 123747.0 58 112394.5 59 101042.0 60 83612.5 61 66183.0 62 56759.0 63 47335.0 64 40197.0 65 33059.0 66 28101.5 67 23144.0 68 19969.0 69 16794.0 70 14033.5 71 11273.0 72 9160.0 73 7047.0 74 6034.0 75 3976.5 76 2932.0 77 2182.5 78 1433.0 79 1123.5 80 814.0 81 575.0 82 336.0 83 234.0 84 132.0 85 102.5 86 73.0 87 38.0 88 3.0 89 2.5 90 2.0 91 2.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2267181.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.94993946454686 #Duplication Level Percentage of deduplicated Percentage of total 1 63.9116386465827 17.224147926053973 2 14.15751501057263 7.630883450066916 3 6.426927399148546 5.196159130502727 4 3.504448489447186 3.7777869858889734 5 2.182860527714312 2.9413979540724755 6 1.4236857294096616 2.3020946534477766 7 1.0406055743347222 1.9630980064353547 8 0.7575045757523792 1.6331761968515095 9 0.5889607679497333 1.4285211338914507 >10 5.325533512169671 32.34016743540728 >50 0.573121465783177 9.742399372795363 >100 0.08792092478110852 4.483105372812949 >500 0.010629581354268872 1.9333580527697063 >1k 0.007206495833402625 3.6217143542579655 >5k 7.206495833402625E-4 1.4622419226302137 >10k+ 7.206495833402625E-4 2.319748052115278 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGC 13342 0.5884841130902209 No Hit GCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTTCTGC 12524 0.5524040647835351 Illumina Single End Adapter 2 (95% over 21bp) CTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTTCTGCT 11645 0.5136334505273289 Illumina Single End Adapter 2 (95% over 22bp) GAATGATACCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCG 10266 0.4528090170127573 No Hit GAATCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTTC 9476 0.41796398258454004 No Hit CCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTTCTGC 8322 0.3670637677362328 Illumina Single End Adapter 2 (95% over 21bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 6431 0.2836562233010951 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 5887 0.25966166794799356 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCC 4157 0.18335545331404945 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTCACAGAT 4022 0.17740092211429082 No Hit TCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTTCTGC 3774 0.16646222776214162 Illumina Single End Adapter 2 (95% over 21bp) GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA 3499 0.15433262717004068 No Hit ACTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTTCTGC 2793 0.12319263437722881 Illumina Single End Adapter 2 (95% over 21bp) TGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTTCTGCTT 2739 0.12081082189732537 Illumina Single End Adapter 2 (95% over 23bp) GCCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTTCTG 2494 0.11000445046072634 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACCTGTCTCTT 2453 0.10819603728154038 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTC 2296 0.10127113803441365 No Hit GAACTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTTCT 2289 0.10096238456479656 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTCACAGATCGTA 2282 0.10065363109517944 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.6464583110038414E-4 0.0 0.0 0.5392599885055493 0.0 2 2.6464583110038414E-4 0.0 0.0 1.816793630504137 0.0 3 2.6464583110038414E-4 0.0 0.0 2.5546703152505246 0.0 4 2.6464583110038414E-4 0.0 0.0 3.620972476392489 0.0 5 2.6464583110038414E-4 0.0 0.0 6.430893695739335 0.0 6 2.6464583110038414E-4 0.0 0.0 8.07421198395717 0.0 7 2.6464583110038414E-4 0.0 0.0 9.574621523380797 0.0 8 2.6464583110038414E-4 0.0 0.0 12.109663939491377 0.0 9 2.6464583110038414E-4 0.0 0.0 12.939681481099216 0.0 10 2.6464583110038414E-4 0.0 0.0 15.190758920439082 0.0 11 2.6464583110038414E-4 0.0 0.0 18.011839372330662 0.0 12 2.6464583110038414E-4 0.0 0.0 20.904153660426758 0.0 13 3.087534696171148E-4 0.0 0.0 21.94946058563476 0.0 14 3.087534696171148E-4 0.0 0.0 22.39940260614393 0.0 15 3.087534696171148E-4 0.0 0.0 23.263294814132617 0.0 16 3.087534696171148E-4 0.0 0.0 24.50042585924988 0.0 17 3.087534696171148E-4 0.0 0.0 25.90529825364627 0.0 18 3.087534696171148E-4 0.0 0.0 27.381580914801244 0.0 19 3.087534696171148E-4 0.0 0.0 28.642750622910125 0.0 20 3.087534696171148E-4 0.0 0.0 29.653521267159526 0.0 21 3.087534696171148E-4 0.0 0.0 30.711266546429243 0.0 22 3.087534696171148E-4 0.0 0.0 31.823220113436026 0.0 23 3.087534696171148E-4 0.0 0.0 32.76205119926464 0.0 24 3.087534696171148E-4 0.0 0.0 33.51898238385025 0.0 25 3.087534696171148E-4 0.0 0.0 34.29165999538634 0.0 26 3.528611081338455E-4 0.0 0.0 34.96130216334735 0.0 27 3.528611081338455E-4 0.0 0.0 35.74857940323247 0.0 28 3.528611081338455E-4 0.0 0.0 36.45434572713868 0.0 29 3.528611081338455E-4 0.0 0.0 37.30077131027474 0.0 30 3.528611081338455E-4 0.0 0.0 38.33840350638083 0.0 31 4.410763851673069E-4 0.0 0.0 39.0530354656289 0.0 32 4.410763851673069E-4 0.0 0.0 39.8339170979291 0.0 33 4.410763851673069E-4 0.0 0.0 40.57016180005037 0.0 34 4.410763851673069E-4 0.0 0.0 41.4167638137405 0.0 35 4.410763851673069E-4 0.0 0.0 42.29521154243971 0.0 36 4.410763851673069E-4 0.0 0.0 43.029471400827724 0.0 37 4.410763851673069E-4 0.0 0.0 43.84144891828222 0.0 38 4.851840236840376E-4 0.0 0.0 44.82346138221871 0.0 39 4.851840236840376E-4 0.0 0.0 46.733807314016836 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAAGTA 30 2.16644E-6 45.000004 14 ATTACGT 20 7.03474E-4 45.0 43 ATAGTCG 20 7.03474E-4 45.0 1 CGATCGA 35 1.2126293E-7 45.0 41 ATCGCTC 20 7.03474E-4 45.0 36 GATTACG 80 0.0 42.1875 1 ACTTGAC 1610 0.0 41.92547 6 ACGCCTA 365 0.0 41.91781 25 ATCCGAT 145 0.0 41.89655 10 TTGACCC 1425 0.0 41.526318 8 CTCAACT 1740 0.0 40.99138 2 TAATACG 465 0.0 40.64516 4 TGCATTA 1230 0.0 40.609756 15 ACTAACG 50 1.0822987E-9 40.5 1 GTATACG 100 0.0 40.5 1 CGTAAGG 395 0.0 40.44304 2 CTTGACC 1670 0.0 40.28443 7 CGCCTAA 380 0.0 40.26316 26 GCTTACG 95 0.0 40.26316 1 TCAACTT 1705 0.0 40.117306 3 >>END_MODULE