##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935100.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3420990 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.843752247156527 33.0 31.0 34.0 30.0 34.0 2 32.17471024469525 33.0 31.0 34.0 30.0 34.0 3 32.2258849046621 34.0 31.0 34.0 30.0 34.0 4 35.80252529238612 37.0 35.0 37.0 35.0 37.0 5 30.282642159141066 37.0 35.0 37.0 0.0 37.0 6 32.77505868184356 37.0 35.0 37.0 17.0 37.0 7 35.04351839672142 37.0 35.0 37.0 32.0 37.0 8 35.63441109152614 37.0 35.0 37.0 35.0 37.0 9 37.60089301634907 39.0 37.0 39.0 35.0 39.0 10 37.260842329267255 39.0 37.0 39.0 34.0 39.0 11 37.182212166653514 39.0 37.0 39.0 34.0 39.0 12 37.166979441623624 39.0 37.0 39.0 34.0 39.0 13 37.19037471609096 39.0 37.0 39.0 34.0 39.0 14 38.40264250991672 40.0 38.0 41.0 34.0 41.0 15 38.47428551384248 40.0 38.0 41.0 34.0 41.0 16 38.53973352742919 40.0 38.0 41.0 34.0 41.0 17 38.51030081935346 40.0 38.0 41.0 34.0 41.0 18 38.44343508750391 40.0 38.0 41.0 34.0 41.0 19 38.3820309325663 40.0 37.0 41.0 34.0 41.0 20 38.27220102952654 40.0 37.0 41.0 34.0 41.0 21 38.24337633258209 40.0 37.0 41.0 34.0 41.0 22 38.25560934115563 40.0 37.0 41.0 34.0 41.0 23 38.16385841525406 40.0 37.0 41.0 34.0 41.0 24 38.159929435631206 40.0 37.0 41.0 34.0 41.0 25 38.10937974095218 40.0 37.0 41.0 34.0 41.0 26 38.05023545815685 40.0 37.0 41.0 34.0 41.0 27 38.02427747523378 40.0 37.0 41.0 34.0 41.0 28 37.97274940879687 40.0 37.0 41.0 34.0 41.0 29 37.968727181313014 40.0 37.0 41.0 34.0 41.0 30 37.81190064864264 40.0 37.0 41.0 33.0 41.0 31 33.205967278477864 39.0 33.0 41.0 9.0 41.0 32 34.01257852259141 39.0 33.0 41.0 16.0 41.0 33 35.83282500095002 39.0 34.0 41.0 28.0 41.0 34 36.60297106977805 39.0 35.0 41.0 30.0 41.0 35 36.7266162718979 39.0 35.0 40.0 31.0 41.0 36 36.830651945781774 39.0 35.0 41.0 31.0 41.0 37 36.92560749958346 39.0 36.0 41.0 31.0 41.0 38 36.87104463912493 39.0 36.0 41.0 31.0 41.0 39 36.76216563041692 39.0 35.0 41.0 31.0 41.0 40 36.68123964115651 39.0 35.0 41.0 31.0 41.0 41 36.57035331877614 39.0 35.0 41.0 30.0 41.0 42 36.432663059523705 39.0 35.0 41.0 30.0 41.0 43 36.32773056922119 38.0 35.0 41.0 30.0 41.0 44 36.219924057071196 38.0 35.0 40.0 30.0 41.0 45 36.09523617432381 38.0 35.0 40.0 30.0 41.0 46 35.907339688218904 38.0 35.0 40.0 30.0 41.0 47 35.701074835062364 37.0 34.0 40.0 29.0 41.0 48 35.63044469583366 37.0 34.0 40.0 29.0 41.0 49 35.53350989041184 37.0 34.0 40.0 29.0 41.0 50 35.254707555415244 36.0 34.0 40.0 29.0 41.0 51 34.616999172754085 35.0 33.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 4.0 10 16.0 11 13.0 12 23.0 13 24.0 14 35.0 15 48.0 16 97.0 17 226.0 18 492.0 19 990.0 20 1829.0 21 3259.0 22 5831.0 23 9968.0 24 15975.0 25 22746.0 26 29092.0 27 32692.0 28 36584.0 29 43261.0 30 55467.0 31 75248.0 32 107787.0 33 139046.0 34 228146.0 35 326770.0 36 425468.0 37 486180.0 38 625835.0 39 747293.0 40 544.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.96712062882382 22.09109059073543 25.577479033846927 10.364309746593822 2 33.51626283619654 23.757450328706017 25.664529858315866 17.061756976781574 3 29.60163578379358 23.986477598589882 28.873542454084927 17.53834416353161 4 25.56064180251915 25.510890122449936 30.58611688429373 18.342351190737187 5 21.60161239875007 38.69026217556906 23.727809786056085 15.980315639624788 6 23.97431737596427 34.013779636888735 26.958775091420904 15.05312789572609 7 78.98576143163237 4.9502337042785856 10.980622568320866 5.083382295768184 8 80.60008944779143 4.180485765816329 9.696695985664968 5.5227288007272755 9 75.47227556935273 5.224189489007568 12.07670878897629 7.22682615266341 10 37.1407107299349 21.937333929651942 22.84394283526114 18.078012505152017 11 25.789902922838127 26.2849350626573 26.138398533757773 21.786763480746803 12 21.336484467946413 23.20340018532647 32.48901633737603 22.971099009351096 13 21.555748482164518 25.002850052177877 35.28268132908895 18.158720136568654 14 20.79208065501507 27.77915164908404 31.598221567441005 19.830546128459893 15 19.037793153443886 27.420191231193307 34.12158468747351 19.420430927889296 16 21.21526224864732 26.863393345201242 30.523269579858464 21.398074826292973 17 21.29187749744957 27.465090514734037 29.110959108328295 22.132072879488103 18 22.02324473324973 26.29233058266759 31.190941803396093 20.493482880686585 19 20.586526122555167 30.043525412234466 28.510226571840313 20.859721893370047 20 20.334435353508777 29.13346721270743 30.204911443763354 20.327185990020432 21 19.95939771820438 29.571205995925155 30.96358071786237 19.505815568008092 22 19.554719540250044 26.241526575640385 29.416952402667064 24.786801481442506 23 18.735102996501013 28.049687371199568 29.876760820698102 23.33844881160132 24 20.176966316767952 26.778125630299996 30.193686622878175 22.851221430053872 25 19.229199734579755 29.337647873861076 28.013645172888552 23.419507218670617 26 19.689592778698565 28.404789256911013 30.20853612550753 21.697081838882895 27 22.11909418033961 27.105662395973095 28.689706780785677 22.085536642901616 28 19.4110184478762 26.97242611057033 29.425312555722172 24.191242885831294 29 22.25630592313921 25.077945273151926 28.316072248091928 24.34967655561694 30 23.98051441249463 27.48496780171822 26.666666666666668 21.867851119120488 31 23.938275177653253 28.52393605359852 24.02342596733694 23.514362801411288 32 22.87638958313237 29.334607818204674 24.998523819128383 22.790478779534578 33 22.308659189299004 29.432649613123687 24.87966933548476 23.379021862092554 34 20.642796383503022 29.898713530293865 25.29039839344751 24.168091692755606 35 23.319126919400524 29.96033311994481 24.704661516110836 22.015878444543834 36 22.470892928655157 32.148120865597384 24.06893910826983 21.31204709747763 37 21.130813010268955 30.91856450910409 26.383181476707033 21.567441003919917 38 20.64495950002777 31.10897722589075 24.917085405102032 23.328977868979447 39 21.36720656885872 31.392930116720596 25.336963861338386 21.902899453082295 40 20.842913893346662 30.59924173996416 27.109404002934824 21.44844036375435 41 19.817684354528954 31.611463348328993 25.25309924904779 23.317753048094264 42 21.98287630188922 29.406458364391597 26.743135758946973 21.867529574772217 43 22.182379954340703 27.026504023689046 27.832001847418436 22.95911417455181 44 21.608130979628704 26.56236937260851 25.681074776599754 26.14842487116303 45 22.686444567215922 25.772919534988407 25.983560314411907 25.55707558338376 46 23.958035539419875 28.257609639314936 25.222289454222313 22.562065367042873 47 20.00628473044353 28.987486078591285 28.276025361079686 22.7302038298855 48 20.517277162458818 27.861408539633263 27.248048079649458 24.373266218258458 49 22.242421053554672 26.072569636274878 28.383596561229353 23.301412748941097 50 20.86963130555775 25.31311111695737 28.40771238734986 25.40954519013502 51 19.972259492135315 25.29153841431866 26.022876418814437 28.713325674731582 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1009.0 1 1518.0 2 2027.0 3 10014.5 4 18002.0 5 14087.0 6 10172.0 7 9723.5 8 9275.0 9 9586.0 10 9897.0 11 10377.0 12 10857.0 13 11127.5 14 11398.0 15 11172.5 16 10947.0 17 11088.5 18 11230.0 19 11653.5 20 12077.0 21 11810.5 22 11544.0 23 13015.5 24 14487.0 25 16244.0 26 22888.0 27 27775.0 28 30732.5 29 33690.0 30 38855.0 31 44020.0 32 50754.5 33 57489.0 34 69055.5 35 80622.0 36 91481.5 37 102341.0 38 115830.5 39 129320.0 40 141350.5 41 153381.0 42 175408.0 43 197435.0 44 226791.5 45 256148.0 46 320970.5 47 385793.0 48 418984.5 49 452176.0 50 437024.5 51 421873.0 52 362898.0 53 303923.0 54 257519.5 55 211116.0 56 177656.5 57 144197.0 58 121575.5 59 98954.0 60 83981.0 61 69008.0 62 55415.5 63 41823.0 64 34124.5 65 26426.0 66 20658.5 67 14891.0 68 11481.0 69 8071.0 70 6233.0 71 4395.0 72 3525.0 73 2655.0 74 1844.0 75 885.5 76 738.0 77 519.0 78 300.0 79 256.0 80 212.0 81 153.5 82 95.0 83 67.5 84 40.0 85 64.0 86 88.0 87 62.0 88 36.0 89 18.5 90 1.0 91 1.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3420990.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.81280820467658 #Duplication Level Percentage of deduplicated Percentage of total 1 67.39058430425916 21.438837332724844 2 14.043729325976297 8.935409350513517 3 6.0087722266467605 5.734677551757024 4 3.157091296655375 4.017437596206045 5 1.8442800480954848 2.933586372288668 6 1.199355151725455 2.2892913246679605 7 0.8490956351414849 1.8908481611728871 8 0.5850952329480196 1.4890817941796728 9 0.44230126249529267 1.2663760709204148 >10 3.7200220746716104 26.15388932314067 >50 0.6577618082613437 13.964469385726868 >100 0.09279629536241632 5.025104610676246 >500 0.004953987913765414 1.0596411575451892 >1k 0.0033687117813346996 1.8885870437344137 >5k 5.944785496472999E-4 1.257114292525654 >10k+ 1.9815951654909996E-4 0.6556486322198964 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGC 10659 0.311576473476976 No Hit CTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGCT 10142 0.2964638891081237 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8626 0.2521492316551641 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGC 7051 0.2061099272432834 No Hit CCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGC 6619 0.19348200374745322 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCC 6211 0.18155563155694698 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCG 6077 0.17763863676888855 No Hit GAATCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTC 5299 0.15489668195463885 No Hit TCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGC 3717 0.10865275841203863 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.4615652194247865E-4 8.769391316548718E-5 0.0 0.31698426478884767 0.0 2 1.4615652194247865E-4 8.769391316548718E-5 0.0 1.0651010380036188 0.0 3 1.4615652194247865E-4 8.769391316548718E-5 0.0 1.5901244961253906 0.0 4 1.4615652194247865E-4 8.769391316548718E-5 0.0 2.3308457493298724 0.0 5 1.4615652194247865E-4 8.769391316548718E-5 0.0 4.272301292900593 0.0 6 1.4615652194247865E-4 8.769391316548718E-5 0.0 5.794989169801724 0.0 7 1.4615652194247865E-4 8.769391316548718E-5 0.0 7.007883682793577 0.0 8 1.4615652194247865E-4 8.769391316548718E-5 0.0 9.220371880654431 0.0 9 1.4615652194247865E-4 8.769391316548718E-5 0.0 9.962759318209056 0.0 10 1.4615652194247865E-4 8.769391316548718E-5 0.0 11.79962525467774 0.0 11 1.4615652194247865E-4 8.769391316548718E-5 0.0 14.359527505195864 0.0 12 1.4615652194247865E-4 8.769391316548718E-5 0.0 16.43381009590791 0.0 13 1.4615652194247865E-4 8.769391316548718E-5 0.0 17.221476823960316 0.0 14 1.7538782633097437E-4 8.769391316548718E-5 0.0 17.517443780893835 0.0 15 1.7538782633097437E-4 8.769391316548718E-5 0.0 18.077310953846695 0.0 16 1.7538782633097437E-4 8.769391316548718E-5 0.0 19.269217390287608 0.0 17 1.7538782633097437E-4 8.769391316548718E-5 0.0 20.814647222002986 0.0 18 1.7538782633097437E-4 8.769391316548718E-5 0.0 22.412839558139602 0.0 19 2.046191307194701E-4 8.769391316548718E-5 0.0 23.559291316256406 0.0 20 2.046191307194701E-4 8.769391316548718E-5 0.0 24.433190392254872 0.0 21 2.046191307194701E-4 8.769391316548718E-5 0.0 25.541173753796414 0.0 22 2.046191307194701E-4 8.769391316548718E-5 0.0 26.736880259807833 0.0 23 2.046191307194701E-4 8.769391316548718E-5 0.0 28.00084186156639 0.0 24 2.3385043510796582E-4 8.769391316548718E-5 0.0 28.944486829835807 0.0 25 2.3385043510796582E-4 8.769391316548718E-5 0.0 29.80628414581744 0.0 26 2.3385043510796582E-4 8.769391316548718E-5 0.0 30.576499785149913 0.0 27 2.3385043510796582E-4 8.769391316548718E-5 0.0 31.340196843603753 0.0 28 2.923130438849573E-4 8.769391316548718E-5 0.0 32.12549583600069 0.0 29 3.21544348273453E-4 8.769391316548718E-5 0.0 32.943387732790804 0.0 30 3.21544348273453E-4 8.769391316548718E-5 0.0 33.7651089304558 0.0 31 3.21544348273453E-4 8.769391316548718E-5 0.0 34.589051707254335 0.0 32 3.21544348273453E-4 8.769391316548718E-5 0.0 35.51188398679914 0.0 33 3.21544348273453E-4 8.769391316548718E-5 0.0 36.40440340369308 0.0 34 3.21544348273453E-4 8.769391316548718E-5 0.0 37.25079582226198 0.0 35 3.21544348273453E-4 8.769391316548718E-5 0.0 38.09800671735375 0.0 36 3.21544348273453E-4 8.769391316548718E-5 0.0 38.927620367203644 0.0 37 3.21544348273453E-4 8.769391316548718E-5 0.0 39.78035597882484 0.0 38 3.21544348273453E-4 8.769391316548718E-5 0.0 40.6408086548046 0.0 39 3.21544348273453E-4 8.769391316548718E-5 0.0 41.49827973773674 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTCGCG 110 0.0 42.954544 1 CGTTTTT 9055 0.0 42.912754 1 CGTTATT 1790 0.0 41.606148 1 CGCGCCG 225 0.0 40.0 27 CCGCCCG 45 1.9303116E-8 40.0 29 ACGCGCC 220 0.0 39.886364 26 TGTCGCG 335 0.0 38.955223 29 GCGCGAG 240 0.0 38.437504 1 CGACGAA 295 0.0 38.135593 29 TAATACG 270 0.0 37.500004 4 CCGTCGT 30 1.1403934E-4 37.500004 32 CGCGAGG 330 0.0 37.5 2 AAGGGCG 1815 0.0 37.438015 5 CCGCGAA 85 0.0 37.058823 30 CGTAAGG 705 0.0 37.02128 2 ACGCGAC 305 0.0 36.885246 26 TTTCGCG 55 2.752131E-9 36.81818 1 TCGCTAG 55 2.752131E-9 36.81818 1 CGCGACG 315 0.0 36.428574 27 GACGCGA 310 0.0 36.29032 25 >>END_MODULE