##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935099.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2888399 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.061897265578615 33.0 31.0 34.0 30.0 34.0 2 32.389275858356136 34.0 31.0 34.0 30.0 34.0 3 32.449359662567396 34.0 31.0 34.0 30.0 34.0 4 35.95190519038402 37.0 35.0 37.0 35.0 37.0 5 30.392502905588874 37.0 35.0 37.0 0.0 37.0 6 32.86957134384827 37.0 35.0 37.0 17.0 37.0 7 35.08325027117098 37.0 35.0 37.0 32.0 37.0 8 35.66985759238942 37.0 35.0 37.0 35.0 37.0 9 37.56639577842258 39.0 37.0 39.0 35.0 39.0 10 37.450412494949624 39.0 37.0 39.0 35.0 39.0 11 37.29559870364171 39.0 37.0 39.0 34.0 39.0 12 37.020547022762436 39.0 35.0 39.0 33.0 39.0 13 36.89929542282766 39.0 35.0 39.0 33.0 39.0 14 37.745541041940534 40.0 37.0 41.0 33.0 41.0 15 37.92296943739421 40.0 37.0 41.0 33.0 41.0 16 38.10822431388461 40.0 37.0 41.0 33.0 41.0 17 38.17892437990734 40.0 37.0 41.0 33.0 41.0 18 38.17008488093231 40.0 37.0 41.0 34.0 41.0 19 38.17712407461711 40.0 37.0 41.0 34.0 41.0 20 38.07751560639648 40.0 36.0 41.0 33.0 41.0 21 38.03079837654008 40.0 36.0 41.0 33.0 41.0 22 38.07093272086024 40.0 36.0 41.0 34.0 41.0 23 38.0478455365758 40.0 36.0 41.0 34.0 41.0 24 38.03689171752241 40.0 36.0 41.0 34.0 41.0 25 37.95074641695971 40.0 36.0 41.0 34.0 41.0 26 37.87257300670718 40.0 35.0 41.0 34.0 41.0 27 37.825397045214324 40.0 35.0 41.0 34.0 41.0 28 37.735384896615734 40.0 35.0 41.0 33.0 41.0 29 37.72286065740917 40.0 35.0 41.0 33.0 41.0 30 37.609837491288424 40.0 35.0 41.0 33.0 41.0 31 32.97580112719884 38.0 33.0 41.0 9.0 41.0 32 33.878640035535255 38.0 33.0 41.0 16.0 41.0 33 35.826823094731715 38.0 34.0 41.0 29.0 41.0 34 36.6146117624331 38.0 35.0 41.0 31.0 41.0 35 36.791278836476536 39.0 35.0 40.0 31.0 41.0 36 36.9863187184319 39.0 35.0 41.0 32.0 41.0 37 37.06809343169001 39.0 35.0 41.0 32.0 41.0 38 37.045971488011176 39.0 35.0 41.0 32.0 41.0 39 37.052892277001895 39.0 35.0 41.0 32.0 41.0 40 37.010347254655606 39.0 35.0 41.0 32.0 41.0 41 36.9096087486528 39.0 35.0 41.0 32.0 41.0 42 36.8561445285087 39.0 35.0 41.0 32.0 41.0 43 36.85797218459084 39.0 35.0 41.0 32.0 41.0 44 36.795152262550985 39.0 35.0 41.0 32.0 41.0 45 36.76048911525035 39.0 35.0 41.0 32.0 41.0 46 36.733898952326186 39.0 35.0 41.0 32.0 41.0 47 36.644683785031084 39.0 35.0 41.0 32.0 41.0 48 36.609686888826644 38.0 35.0 41.0 32.0 41.0 49 36.58257636843109 38.0 35.0 40.0 32.0 41.0 50 36.37206736326941 38.0 35.0 40.0 31.0 41.0 51 35.71545828675332 37.0 34.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 23.0 10 27.0 11 36.0 12 32.0 13 52.0 14 59.0 15 117.0 16 181.0 17 341.0 18 577.0 19 1047.0 20 1746.0 21 2726.0 22 4491.0 23 6895.0 24 9935.0 25 13525.0 26 17574.0 27 21594.0 28 27602.0 29 35642.0 30 48578.0 31 69862.0 32 101745.0 33 123328.0 34 233147.0 35 268729.0 36 319233.0 37 334242.0 38 486799.0 39 757740.0 40 768.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.48253097996503 21.614811527077805 25.5469898722441 10.355667620713065 2 32.938212483801586 23.382192003251628 25.614051244305237 18.065544268641556 3 33.01091712052248 23.849267362300015 25.71237561015635 17.427439907021157 4 29.718089502177502 26.035461167241785 24.993984556842737 19.252464773737977 5 22.560248774494106 39.02137481698339 21.413246577083015 17.00512983143949 6 28.185233411311945 32.7464799703919 23.82575952976026 15.242527088535898 7 82.12082195015302 5.895895961742128 7.267659350387532 4.7156227377173305 8 83.70775644223669 4.405693257752824 7.032269433689736 4.854280866320755 9 77.87487116565266 6.736292319724526 9.399843996622351 5.988992518000456 10 44.3355298211916 26.418303011460676 15.833719648843529 13.412447518504194 11 33.57358176623105 23.46580233548066 23.93897103551137 19.021644862776924 12 30.71667037691122 21.109998999445715 28.45742572269274 19.715904900950317 13 28.46182262215158 22.10681419014478 30.227368171779588 19.203995015924047 14 22.336803190971885 24.481728459260648 32.9050799422102 20.276388407557267 15 21.46815588843508 24.377864692516514 34.306132913077455 19.847846505970953 16 27.740765732158195 24.987475760793437 27.48429147081134 19.78746703623703 17 27.436237168064388 24.2735854707054 26.179312484182415 22.110864877047803 18 28.110797711811976 22.889012217494884 29.399331602039748 19.600858468653396 19 26.256552505384473 25.62644565380337 26.817866922125372 21.29913491868679 20 24.804467803790267 29.252191265818883 26.80602645271654 19.137314477674312 21 24.385931445066973 26.503748270235516 30.754961485584232 18.35535879911328 22 23.048685448236203 22.530093660882724 32.34480416313674 22.076416727744334 23 22.197314152234508 24.824859723327698 31.191777867254487 21.786048257183303 24 23.355429772687224 26.271093432728648 28.263581312692605 22.109895481891524 25 24.410858749085566 25.891713714067897 26.292420126166782 23.405007410679758 26 21.783555526781445 25.687690654926833 27.003506094552726 25.525247723738996 27 22.111003362070132 24.837357996592576 30.081612685781984 22.97002595555531 28 19.503018800380417 26.93460979594578 27.612459358973606 25.949912044700195 29 24.032586910603417 26.766731327631675 26.842967332421868 22.357714429343037 30 25.77656341800423 24.398256612053945 28.043217020917123 21.781962949024702 31 25.956143870704846 26.61654432091965 26.719888768830067 20.707423039545436 32 27.193680651461243 25.890986667700687 25.50412875783436 21.411203923003715 33 26.936513965002757 24.844524596497923 26.502744253823657 21.716217184675664 34 21.952334147740668 25.291623491075853 30.95735734571297 21.79868501547051 35 22.955069573144154 27.607889353236864 27.45029339783042 21.98674767578856 36 26.31547788238398 26.833827320948387 25.703962645050076 21.146732151617556 37 22.655387984831734 28.588951872646405 27.07357951584944 21.682080626672423 38 23.5196383879097 28.060804618752467 25.60380335265315 22.815753640684683 39 24.303844448083524 25.016038296648073 26.14292554456639 24.537191710702018 40 25.789650252613995 22.230931391404027 28.985330627797612 22.99408772818437 41 21.912554325077664 23.52576635014761 26.602591954920356 27.959087369854373 42 22.484670573559956 24.028259253655744 29.269259544820503 24.217810627963797 43 22.618204756337335 23.913282063869985 29.428621184261594 24.039891995531086 44 23.238479171333324 24.05349814897457 27.354600247403493 25.353422432288614 45 22.666709135406844 23.23993326406774 26.887490267099523 27.205867333425886 46 22.882087966378606 23.744122609099367 28.360832419620696 25.01295700490133 47 20.225460540597055 24.95489715929136 30.927098368334843 23.89254393177674 48 20.48376972848973 26.29847884589352 29.385483099807196 23.832268325809558 49 24.693991377230084 23.501635335007386 29.15320909611172 22.651164191650807 50 21.65434900095174 24.19987681757264 28.323441463592808 25.822332717882812 51 21.16660475232127 23.965490917286704 27.091859538796403 27.776044791595623 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1119.0 1 1978.5 2 2838.0 3 4210.5 4 5583.0 5 4452.0 6 3321.0 7 3268.0 8 3215.0 9 3445.0 10 3675.0 11 4013.5 12 4352.0 13 4566.5 14 4781.0 15 4597.0 16 4413.0 17 4994.5 18 5576.0 19 5732.0 20 5888.0 21 6253.5 22 6619.0 23 8831.5 24 11044.0 25 12970.0 26 18372.5 27 21849.0 28 25881.0 29 29913.0 30 34552.5 31 39192.0 32 46203.0 33 53214.0 34 63133.0 35 73052.0 36 77421.5 37 81791.0 38 87035.0 39 92279.0 40 103116.5 41 113954.0 42 128382.0 43 142810.0 44 157846.0 45 172882.0 46 199620.0 47 226358.0 48 258662.5 49 290967.0 50 291760.0 51 292553.0 52 265471.0 53 238389.0 54 217562.5 55 196736.0 56 186363.5 57 175991.0 58 167025.0 59 158059.0 60 137940.5 61 117822.0 62 106503.0 63 95184.0 64 82774.0 65 70364.0 66 58782.0 67 47200.0 68 39548.0 69 31896.0 70 25913.5 71 19931.0 72 16663.0 73 13395.0 74 10315.0 75 5872.0 76 4509.0 77 3372.0 78 2235.0 79 1516.0 80 797.0 81 505.0 82 213.0 83 237.0 84 261.0 85 146.5 86 32.0 87 22.0 88 12.0 89 7.0 90 2.0 91 1.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2888399.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.884542505458136 #Duplication Level Percentage of deduplicated Percentage of total 1 66.975806221934 15.327106843231759 2 13.258914527338291 6.068483861542191 3 5.712799341111534 3.9220439804046032 4 3.0354687655892083 2.778612559604671 5 1.7918908648427188 2.0503301330817667 6 1.1664423453738768 1.6016099659724856 7 0.7931552123662764 1.2705695919575206 8 0.6135928910579619 1.1233434077170297 9 0.43406698361722645 0.8940081903123975 >10 4.045252120125392 20.90802537663215 >50 1.774623505826543 29.377089074281653 >100 0.3872545909074312 11.431210505099326 >500 0.00766616422117177 1.1979594929745203 >1k 0.002385028868808995 0.9656033819966454 >5k 6.814368196597128E-4 1.0840036351912437 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 9510 0.3292481405789159 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 6380 0.22088361060919906 No Hit CTGTCTCTTATACACATCTGACGCGTAAGTCGTCGTATGCCGTCTTCTGCT 5967 0.20658503205408948 No Hit GCTGTCTCTTATACACATCTGACGCGTAAGTCGTCGTATGCCGTCTTCTGC 5948 0.2059272281980433 No Hit CCTGTCTCTTATACACATCTGACGCGTAAGTCGTCGTATGCCGTCTTCTGC 4717 0.16330846257736553 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.924251116275833E-5 0.0 0.0 0.21814853141827012 0.0 2 6.924251116275833E-5 0.0 0.0 0.7412757032529093 0.0 3 6.924251116275833E-5 0.0 0.0 1.0609337560357832 0.0 4 6.924251116275833E-5 0.0 0.0 1.4683913129730346 0.0 5 6.924251116275833E-5 0.0 0.0 2.557125937240665 0.0 6 6.924251116275833E-5 0.0 0.0 3.326860312581468 0.0 7 6.924251116275833E-5 0.0 0.0 3.984006364771626 0.0 8 6.924251116275833E-5 0.0 0.0 5.144510851859455 0.0 9 6.924251116275833E-5 0.0 0.0 5.566163123585072 0.0 10 6.924251116275833E-5 0.0 0.0 6.456102498304424 0.0 11 6.924251116275833E-5 0.0 0.0 7.993078518584171 0.0 12 6.924251116275833E-5 0.0 0.0 9.169958859561993 0.0 13 6.924251116275833E-5 0.0 0.0 9.65687219805851 0.0 14 6.924251116275833E-5 0.0 0.0 9.884680059783983 0.0 15 6.924251116275833E-5 0.0 0.0 10.2711917570945 0.0 16 6.924251116275833E-5 0.0 0.0 10.99086379686463 0.0 17 6.924251116275833E-5 0.0 0.0 11.842027365332836 0.0 18 6.924251116275833E-5 0.0 0.0 12.783690895890768 0.0 19 6.924251116275833E-5 0.0 0.0 13.420548892310238 0.0 20 6.924251116275833E-5 0.0 0.0 14.00949107100508 0.0 21 6.924251116275833E-5 0.0 0.0 14.663382725170587 0.0 22 6.924251116275833E-5 0.0 0.0 15.362628224147702 0.0 23 6.924251116275833E-5 0.0 0.0 15.999313114289265 0.0 24 1.7310627790689584E-4 0.0 0.0 16.53919697382529 0.0 25 1.7310627790689584E-4 0.0 0.0 17.054707469432028 0.0 26 1.7310627790689584E-4 0.0 0.0 17.533588676633663 0.0 27 1.7310627790689584E-4 0.0 0.0 18.096184079831076 0.0 28 1.7310627790689584E-4 0.0 0.0 18.57430361940992 0.0 29 1.7310627790689584E-4 0.0 0.0 19.15988753631337 0.0 30 1.7310627790689584E-4 0.0 0.0 19.9373770729044 0.0 31 1.7310627790689584E-4 0.0 0.0 20.46043500222788 0.0 32 1.7310627790689584E-4 0.0 0.0 21.0308201879311 0.0 33 1.7310627790689584E-4 0.0 0.0 21.61404985945501 0.0 34 1.7310627790689584E-4 0.0 0.0 22.27344629325796 0.0 35 2.0772753348827498E-4 0.0 0.0 22.987544310879485 0.0 36 2.0772753348827498E-4 0.0 0.0 23.61993616532896 0.0 37 2.0772753348827498E-4 0.0 0.0 24.28192919330051 0.0 38 2.0772753348827498E-4 0.0 0.0 25.102002874256637 0.0 39 2.0772753348827498E-4 0.0 0.0 26.595079142459195 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGGTAC 25 3.892278E-5 45.0 11 CCTATCG 20 7.035063E-4 45.0 10 CGATCGC 20 7.035063E-4 45.0 10 TCCGGTA 20 7.035063E-4 45.0 16 CACGTAC 30 2.1666474E-6 44.999996 25 GCGCGTA 275 0.0 40.090908 31 AACGAGC 890 0.0 38.426964 15 TAAACGG 170 0.0 38.38235 2 TATACGG 210 0.0 37.5 2 TCGCATA 30 1.14034985E-4 37.499996 15 ACCGTTG 30 1.14034985E-4 37.499996 16 CGAAAGG 495 0.0 37.272728 2 ACGCATC 240 0.0 36.5625 29 CACAACG 785 0.0 36.114647 12 CTATCGA 25 0.0021076356 36.0 44 AGCGACT 920 0.0 35.951084 19 CTAACGC 220 0.0 35.795456 29 GACCGAT 1215 0.0 35.74074 9 ACAACGA 795 0.0 35.660374 13 TAAGGGA 2710 0.0 35.61808 4 >>END_MODULE