##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935098.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2207821 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.061168002297286 33.0 31.0 34.0 30.0 34.0 2 32.38213786353151 34.0 31.0 34.0 30.0 34.0 3 32.44180121486298 34.0 31.0 34.0 30.0 34.0 4 35.94816427599883 37.0 35.0 37.0 35.0 37.0 5 30.397725177901652 37.0 35.0 37.0 0.0 37.0 6 32.87886110332314 37.0 35.0 37.0 17.0 37.0 7 35.07740573171466 37.0 35.0 37.0 32.0 37.0 8 35.64617330843397 37.0 35.0 37.0 35.0 37.0 9 37.540850458438435 39.0 37.0 39.0 35.0 39.0 10 37.4415068069377 39.0 37.0 39.0 35.0 39.0 11 37.30486755946247 39.0 37.0 39.0 34.0 39.0 12 37.05902788314813 39.0 37.0 39.0 34.0 39.0 13 36.959279307516326 39.0 37.0 39.0 33.0 39.0 14 37.97722324409452 40.0 37.0 41.0 33.0 41.0 15 38.143522957703546 40.0 37.0 41.0 33.0 41.0 16 38.28201788097858 40.0 37.0 41.0 34.0 41.0 17 38.31300318277614 40.0 37.0 41.0 34.0 41.0 18 38.291090174429904 40.0 37.0 41.0 34.0 41.0 19 38.26770240884564 40.0 37.0 41.0 34.0 41.0 20 38.186496097283246 40.0 37.0 41.0 34.0 41.0 21 38.13669994080136 40.0 37.0 41.0 34.0 41.0 22 38.158808164248825 40.0 36.0 41.0 34.0 41.0 23 38.0969748000404 40.0 36.0 41.0 34.0 41.0 24 38.083711949474164 40.0 36.0 41.0 34.0 41.0 25 38.000502758149324 40.0 36.0 41.0 34.0 41.0 26 37.91959719560599 40.0 36.0 41.0 34.0 41.0 27 37.885005623191375 40.0 36.0 41.0 34.0 41.0 28 37.81853601356269 40.0 36.0 41.0 34.0 41.0 29 37.797291537674475 40.0 36.0 41.0 33.0 41.0 30 37.68060227708678 40.0 36.0 41.0 33.0 41.0 31 33.081590853606336 38.0 33.0 41.0 9.0 41.0 32 33.95750425419452 38.0 33.0 41.0 16.0 41.0 33 35.92519185205685 38.0 34.0 41.0 29.0 41.0 34 36.775017539918316 38.0 35.0 41.0 31.0 41.0 35 36.90719311031103 39.0 35.0 41.0 32.0 41.0 36 37.06308255968215 39.0 35.0 41.0 32.0 41.0 37 37.19721888685722 39.0 35.0 41.0 32.0 41.0 38 37.15212555728023 39.0 35.0 41.0 32.0 41.0 39 37.155079601108966 39.0 35.0 41.0 33.0 41.0 40 37.075757953203635 39.0 35.0 41.0 32.0 41.0 41 36.983439327735354 39.0 35.0 41.0 32.0 41.0 42 36.9156168004562 39.0 35.0 41.0 32.0 41.0 43 36.91872937162931 39.0 35.0 41.0 32.0 41.0 44 36.85702101755532 39.0 35.0 41.0 32.0 41.0 45 36.808811946258324 39.0 35.0 41.0 32.0 41.0 46 36.736422019719896 39.0 35.0 41.0 32.0 41.0 47 36.61927574744511 38.0 35.0 40.0 32.0 41.0 48 36.61161978258201 38.0 35.0 40.0 32.0 41.0 49 36.58707476738377 38.0 35.0 40.0 32.0 41.0 50 36.37934778227039 38.0 35.0 40.0 31.0 41.0 51 35.65798721907256 37.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 4.0 10 22.0 11 13.0 12 22.0 13 29.0 14 32.0 15 74.0 16 129.0 17 218.0 18 439.0 19 775.0 20 1243.0 21 2017.0 22 3282.0 23 5131.0 24 7272.0 25 9746.0 26 12653.0 27 15845.0 28 19948.0 29 25929.0 30 34646.0 31 49877.0 32 75054.0 33 89449.0 34 167678.0 35 215780.0 36 251689.0 37 259742.0 38 381451.0 39 577033.0 40 597.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.31787812508351 21.791078171645257 25.31197049036131 10.579073212909924 2 32.07207468359074 23.928343828598422 25.765041640604014 18.234539847206815 3 32.28382192215764 24.06232208136439 25.314597514925353 18.339258481552626 4 29.740998024749288 25.663765314307636 25.021774863088993 19.573461797854083 5 22.90969240712902 38.88793520851554 21.077795708981842 17.124576675373593 6 27.651064103475782 32.51038014404247 23.795814968695378 16.042740783786368 7 80.403664971028 6.053978107826676 8.174621040383254 5.367735880762073 8 81.23194769865854 4.958463571095664 8.079866981970007 5.7297217482757885 9 74.9261375808999 6.821069280525912 11.026754433443653 7.226038705130533 10 43.0550302764581 23.746173263140445 17.738575726927138 15.460220733474317 11 32.457613185126874 24.15168621006866 23.823262846036886 19.567437758767582 12 28.963896982590526 21.923199389805607 28.94206550259283 20.17083812501104 13 26.710000493699443 22.794601555107956 31.266121664754525 19.229276286438076 14 21.257746891618478 25.981997634772018 31.1470902758874 21.613165197722097 15 20.02010126726759 25.44920987706884 33.39496272569198 21.135726129971587 16 25.083781701505693 24.82683152302655 28.897949607327767 21.19143716813999 17 24.748609601955955 24.77877509091543 26.630102712131098 23.842512594997512 18 25.3004659345119 23.302296698871874 29.778184010388525 21.619053356227703 19 24.456873994766788 25.943362256269868 27.436961601506642 22.162802147456702 20 24.459591606384755 27.515047641996336 27.991490252153596 20.03387049946531 21 24.35568825552434 26.077974618413357 29.92869440049714 19.63764272556516 22 23.474819743086055 23.609522692283477 29.508189296143122 23.407468268487346 23 22.19813109849032 25.22953627128286 29.913566362490435 22.65876626773638 24 23.05281995234215 24.82610682659509 29.288334516249282 22.83273870481348 25 22.938589677333443 26.553149009815556 26.77730667477119 23.730954638079808 26 20.91958541928897 27.049067836568273 27.421516508811177 24.60983023533158 27 22.437869736722316 26.159004738155854 28.16346977404418 23.239655751077645 28 19.620295304737116 26.805932183813812 28.13864892126671 25.435123590182357 29 21.04237617089429 27.07692335565247 27.659533993018453 24.221166480434782 30 24.81994690692769 25.99422688705289 26.82106022182052 22.3647659841989 31 26.222959198232104 27.372282444998934 24.664363641798857 21.740394714970098 32 24.33077681569294 27.171903881700555 25.654570728333503 22.842748574273006 33 24.861209309993882 25.430775411593604 25.427333103544175 24.280682174868343 34 22.258824424625004 26.08173398115155 28.011192936383882 23.648248657839563 35 22.057675871368197 27.841568677895534 27.254926916629564 22.845828534106705 36 24.254683690389754 27.908421923697617 24.519650823141912 23.317243562770713 37 23.068808567361213 28.25093157461588 26.53865508118638 22.14160477683653 38 21.63676312527148 27.875765290755 26.861190286712556 23.626281297260967 39 22.499785988085087 25.070827752793367 26.400645704520432 26.02874055460112 40 24.715092392000983 23.69372335891361 27.785902933254096 23.805281315831312 41 21.493680873585312 25.982903505311345 25.553792630833748 26.969622990269592 42 21.50310192719428 25.665712935967182 27.88930805531789 24.94187708152065 43 21.897789721177578 24.405556428714103 28.92095871902659 24.775695131081733 44 21.76956374633632 24.294994929389656 27.31711492915413 26.618326395119894 45 21.880442300349532 23.81157711607961 26.985747485869556 27.32223309770131 46 23.41285819819632 24.770441081953653 27.291252325256444 24.52544839459358 47 20.048409721621454 25.73261147529623 29.579390720533954 24.639588082548357 48 19.983957032748577 26.041739796840414 28.680042449093474 25.294260721317535 49 22.8059249368495 23.262438395141636 29.24403744687635 24.687599221132512 50 21.45554372387979 23.817057632842516 28.780322317796596 25.947076325481095 51 20.600809576500996 23.647433374354172 26.352770446517177 29.39898660262766 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1055.0 1 1730.0 2 2405.0 3 3200.0 4 3995.0 5 3266.0 6 2537.0 7 2616.5 8 2696.0 9 2948.5 10 3201.0 11 3386.5 12 3572.0 13 3798.0 14 4024.0 15 4206.0 16 4388.0 17 4338.0 18 4288.0 19 4536.5 20 4785.0 21 5483.5 22 6182.0 23 6798.0 24 7414.0 25 9659.5 26 14681.0 27 17457.0 28 19579.0 29 21701.0 30 25938.5 31 30176.0 32 33726.5 33 37277.0 34 43511.5 35 49746.0 36 55221.0 37 60696.0 38 65829.0 39 70962.0 40 80014.5 41 89067.0 42 100196.5 43 111326.0 44 127609.5 45 143893.0 46 164934.5 47 185976.0 48 209818.5 49 233661.0 50 234421.0 51 235181.0 52 208231.5 53 181282.0 54 161073.5 55 140865.0 56 129677.0 57 118489.0 58 111542.0 59 104595.0 60 96105.5 61 87616.0 62 77523.5 63 67431.0 64 60748.0 65 54065.0 66 46134.5 67 38204.0 68 31700.0 69 25196.0 70 20515.5 71 15835.0 72 13421.0 73 11007.0 74 8623.5 75 5249.0 76 4258.0 77 2898.5 78 1539.0 79 1302.5 80 1066.0 81 688.5 82 311.0 83 226.0 84 141.0 85 111.5 86 82.0 87 57.5 88 33.0 89 16.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2207821.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.838767650922 #Duplication Level Percentage of deduplicated Percentage of total 1 65.78576160832283 15.68251485719753 2 13.606431510812412 6.487211186888814 3 6.180087443230492 4.419770058646569 4 3.1860035062255867 3.038015892797384 5 2.005101691098625 2.389957666528545 6 1.323503796104832 1.8930419688273799 7 0.8763516743344231 1.4623800761468346 8 0.6480426044541726 1.23588296603851 9 0.47840399254755595 1.0264105459453146 >10 3.9046607154555235 20.691323335269942 >50 1.6710935615026314 28.55938792894164 >100 0.32575940494316963 10.307610668780304 >500 0.005150336176236504 0.7808659648512389 >1k 0.003004362769471294 1.1561563682938942 >5k 6.43792022029563E-4 0.8694705148461516 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTGC 6080 0.27538464395437856 TruSeq Adapter, Index 21 (95% over 21bp) CTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTGCT 5831 0.2641065557397996 TruSeq Adapter, Index 14 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTGC 5085 0.2303175846230288 TruSeq Adapter, Index 21 (95% over 21bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 3628 0.1643249158333035 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 2646 0.11984667235251409 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.529352696618068E-5 0.0 0.0 0.2800951707588613 0.0 2 1.3588058089854206E-4 0.0 0.0 1.002708099977308 0.0 3 1.3588058089854206E-4 0.0 0.0 1.4430517691425164 0.0 4 1.3588058089854206E-4 0.0 0.0 1.9994374543950801 0.0 5 1.3588058089854206E-4 0.0 0.0 3.376179500059108 0.0 6 1.3588058089854206E-4 0.0 0.0 4.328747665684854 0.0 7 1.3588058089854206E-4 0.0 0.0 5.152908682361478 0.0 8 1.3588058089854206E-4 0.0 0.0 6.615617842207317 0.0 9 1.3588058089854206E-4 0.0 0.0 7.1211841902038255 0.0 10 1.3588058089854206E-4 0.0 0.0 8.20220479830566 0.0 11 1.3588058089854206E-4 0.0 0.0 9.996779630232705 0.0 12 1.3588058089854206E-4 0.0 0.0 11.443726642694312 0.0 13 1.3588058089854206E-4 0.0 0.0 12.02307614611873 0.0 14 1.3588058089854206E-4 0.0 0.0 12.284283916132694 0.0 15 1.3588058089854206E-4 0.0 0.0 12.754566606622548 0.0 16 1.3588058089854206E-4 0.0 0.0 13.660844787688857 0.0 17 1.3588058089854206E-4 0.0 0.0 14.736701933716546 0.0 18 1.3588058089854206E-4 0.0 0.0 15.926562887118113 0.0 19 1.3588058089854206E-4 0.0 0.0 16.70552096388249 0.0 20 1.3588058089854206E-4 0.0 0.0 17.405849477833574 0.0 21 1.3588058089854206E-4 0.0 0.0 18.203377900654083 0.0 22 1.3588058089854206E-4 0.0 0.0 19.00996502886783 0.0 23 2.2646763483090342E-4 0.0 0.0 19.75599471152779 0.0 24 2.2646763483090342E-4 0.0 0.0 20.379143055528505 0.0 25 2.2646763483090342E-4 0.0 0.0 20.956952579036074 0.0 26 2.2646763483090342E-4 0.0 0.0 21.4765599203921 0.0 27 2.2646763483090342E-4 0.0 0.0 22.017228751787396 0.0 28 2.2646763483090342E-4 0.0 0.0 22.560252846584937 0.0 29 2.2646763483090342E-4 0.0 0.0 23.180275937224984 0.0 30 2.2646763483090342E-4 0.0 0.0 23.922410376565853 0.0 31 2.2646763483090342E-4 0.0 0.0 24.50153341235544 0.0 32 2.2646763483090342E-4 0.0 0.0 25.137590411541517 0.0 33 2.2646763483090342E-4 0.0 0.0 25.755348825833252 0.0 34 2.2646763483090342E-4 0.0 0.0 26.445441002689982 0.0 35 2.2646763483090342E-4 0.0 0.0 27.17444031921066 0.0 36 2.2646763483090342E-4 0.0 0.0 27.806330313915847 0.0 37 2.717611617970841E-4 0.0 0.0 28.482517377993958 0.0 38 2.717611617970841E-4 0.0 0.0 29.270624747205503 0.0 39 2.717611617970841E-4 0.0 0.0 30.396984175800483 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGATT 25 3.891978E-5 45.0 40 AATGCGC 35 1.2126111E-7 45.0 33 CGTCGAA 25 3.891978E-5 45.0 23 CATCGCG 55 6.184564E-11 40.909092 1 TAGTACG 110 0.0 40.909092 1 ACACGAT 45 1.9297659E-8 40.0 16 CCGTATA 40 3.4601544E-7 39.375 13 TATTACG 80 0.0 39.375 1 TAGGACG 75 0.0 39.0 1 ATCGGAC 110 0.0 38.863636 28 ATTAGCG 105 0.0 38.57143 1 TATTGCG 105 0.0 38.57143 1 TTACGGG 860 0.0 38.4593 3 ACGGGAT 635 0.0 38.267715 5 GCCGATA 100 0.0 38.25 9 TACGGGA 790 0.0 37.87975 4 GTCGACT 280 0.0 37.767857 31 TAAGTCG 30 1.14026254E-4 37.499996 1 CCGTTAG 30 1.14026254E-4 37.499996 44 TAACGCA 140 0.0 36.964283 30 >>END_MODULE