##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935095.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3148692 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.864490715509806 33.0 31.0 34.0 30.0 34.0 2 32.18868660383423 34.0 31.0 34.0 30.0 34.0 3 32.25241878214827 34.0 31.0 34.0 30.0 34.0 4 35.81462905866944 37.0 35.0 37.0 35.0 37.0 5 30.33451795221635 37.0 35.0 37.0 0.0 37.0 6 32.78162456029361 37.0 35.0 37.0 17.0 37.0 7 34.98998187183758 37.0 35.0 37.0 32.0 37.0 8 35.521283123277854 37.0 35.0 37.0 33.0 37.0 9 37.42913851211868 39.0 37.0 39.0 35.0 39.0 10 37.327417543538715 39.0 37.0 39.0 34.0 39.0 11 37.18739495638189 39.0 37.0 39.0 34.0 39.0 12 37.04266184180606 39.0 37.0 39.0 33.0 39.0 13 36.95982109396537 39.0 37.0 39.0 33.0 39.0 14 37.96591537057292 40.0 37.0 41.0 33.0 41.0 15 38.07426575860707 40.0 37.0 41.0 33.0 41.0 16 38.22679766709478 40.0 37.0 41.0 33.0 41.0 17 38.23190740790144 40.0 37.0 41.0 34.0 41.0 18 38.18986868197969 40.0 37.0 41.0 34.0 41.0 19 38.184098984594236 40.0 37.0 41.0 34.0 41.0 20 38.06665307372077 40.0 37.0 41.0 33.0 41.0 21 38.02588439898218 40.0 37.0 41.0 33.0 41.0 22 38.05201461432239 40.0 37.0 41.0 34.0 41.0 23 37.98507316688961 40.0 36.0 41.0 34.0 41.0 24 37.940385404479066 40.0 36.0 41.0 33.0 41.0 25 37.87587671325109 40.0 36.0 41.0 33.0 41.0 26 37.828056539032715 40.0 36.0 41.0 33.0 41.0 27 37.75689556171261 40.0 36.0 41.0 33.0 41.0 28 37.72563813799508 40.0 36.0 41.0 33.0 41.0 29 37.73001042972765 40.0 36.0 41.0 33.0 41.0 30 37.543487581510036 39.0 36.0 41.0 33.0 41.0 31 33.001146507819755 38.0 33.0 40.0 9.0 41.0 32 33.8826125260902 38.0 33.0 40.0 16.0 41.0 33 35.77604351267129 38.0 34.0 40.0 28.0 41.0 34 36.55783989034177 38.0 35.0 40.0 30.0 41.0 35 36.7360891443177 39.0 35.0 40.0 31.0 41.0 36 36.89158514075051 39.0 35.0 40.0 31.0 41.0 37 36.959289762225076 39.0 35.0 41.0 32.0 41.0 38 36.99210116454706 39.0 35.0 41.0 32.0 41.0 39 36.99152378193866 39.0 35.0 41.0 32.0 41.0 40 36.9359718257613 39.0 35.0 41.0 32.0 41.0 41 36.815229943100185 39.0 35.0 41.0 31.0 41.0 42 36.800438404264376 39.0 35.0 41.0 31.0 41.0 43 36.8179145499147 39.0 35.0 41.0 31.0 41.0 44 36.775473434683356 39.0 35.0 41.0 31.0 41.0 45 36.770066745175455 39.0 35.0 40.0 32.0 41.0 46 36.71494004494565 39.0 35.0 40.0 31.0 41.0 47 36.59226497860064 39.0 35.0 40.0 31.0 41.0 48 36.60172636764727 39.0 35.0 40.0 31.0 41.0 49 36.5940450828471 39.0 35.0 40.0 31.0 41.0 50 36.37970592233219 38.0 35.0 40.0 31.0 41.0 51 35.739756698972144 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 8.0 10 19.0 11 22.0 12 27.0 13 36.0 14 53.0 15 80.0 16 166.0 17 315.0 18 567.0 19 993.0 20 1833.0 21 3112.0 22 5014.0 23 7852.0 24 11335.0 25 15194.0 26 19275.0 27 24071.0 28 30702.0 29 39834.0 30 53831.0 31 76311.0 32 107150.0 33 134181.0 34 236782.0 35 294525.0 36 378747.0 37 381421.0 38 577674.0 39 746970.0 40 589.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.24439862647728 20.890865159247078 25.339982443503523 11.524753770772117 2 30.957299094354102 26.194781833218368 24.75529521464786 18.092623857779675 3 30.649202907111906 25.894149062531362 26.3211200079271 17.13552802242963 4 27.67069627642208 24.61676149969575 28.286761614028936 19.425780609853234 5 23.438748534312026 37.46670045847609 21.162406484978526 17.932144522233358 6 25.79839501608922 33.160086791594736 24.826372347628794 16.215145844687253 7 76.65614801320675 5.629543950313336 11.74236794198988 5.971940094490029 8 76.02010612660749 6.486090097094285 10.358459957341017 7.135343818957206 9 69.69033490732025 6.422952768959302 13.310225325309686 10.576486998410768 10 42.38372632191399 19.587244481200447 20.00052720304177 18.028501993843793 11 28.698932763191827 22.450211071772024 25.962050273573915 22.888805891462233 12 25.27760733663375 19.159511314539497 31.908710029434445 23.654171319392304 13 24.32422732995161 20.577338145490252 35.00710771329809 20.09132681126004 14 19.740133363314037 24.280304329543824 33.442680325671745 22.5368819814704 15 18.04962187473402 23.46891979272663 36.75484931520771 21.72660901733164 16 21.6467345805814 24.53510854666001 30.00274399655476 23.815412876203833 17 22.319013736497567 24.555910835356396 28.352884308785995 24.77219111936004 18 22.41384676557758 22.87324387396417 31.38804938685651 23.324859973601736 19 21.873940036053067 25.11433318978166 28.74752436884903 24.26420240531624 20 22.1676492969144 27.11630734285856 29.61979132922496 21.09625203100208 21 21.774660716259323 26.523934382912017 31.142550621019776 20.558854279808887 22 20.397326890022903 23.18041904384424 30.62728904573709 25.79496502039577 23 20.727209901762382 24.459743919062266 30.282161608693386 24.530884570481966 24 22.34365889073939 23.662778067845313 28.850360721213764 25.14320232020153 25 21.163581576095723 26.721190894504765 25.957762778957104 26.157464750442404 26 19.59245299317939 24.824403276027 28.06149347093968 27.52165025985393 27 21.53954721516109 25.28430853192373 28.37886335024194 24.79728090267324 28 18.49043983978109 24.488803604798438 29.152740248966875 27.8680163064536 29 21.892741493928273 23.22237297265023 27.09382181553483 27.791063717886665 30 23.54657108412001 25.984821633872095 27.011089049040045 23.457518232967846 31 24.080792913374825 25.62025755456552 26.743644662609107 23.555304869450552 32 25.556453282823473 24.474384919198194 26.28262783403394 23.68653396394439 33 26.628231659368396 23.300659448431286 26.3121003896221 23.75900850257821 34 22.662966082424067 21.382751949063294 31.432321738677523 24.52196022983512 35 22.764659102890977 23.90290952560619 28.465534259940316 24.866897111562515 36 25.347636415375018 24.444435975319276 27.938966402556996 22.26896120674871 37 22.773234092124603 24.760440208188033 31.610109848788003 20.856215850899357 38 25.04328781602011 23.16511110010125 29.041710018001126 22.749891065877513 39 27.624105501586055 21.062174388603268 28.48109627743838 22.8326238323723 40 24.89779883202295 20.557456874156 31.890543755946915 22.65420053787414 41 21.437060214209584 23.014445363344525 29.996995577846292 25.551498844599596 42 22.75633818741242 21.687735732805876 31.820133566573038 23.735792513208658 43 24.576236735762023 21.175872393997253 30.154426028331766 24.093464841908958 44 23.412864770514233 21.014726114843878 28.84013425257218 26.732274862069712 45 22.894744865487002 19.52464705979499 29.02741836927842 28.553189705439593 46 25.061898718579016 21.174443229124982 29.638656305538934 24.125001746757064 47 20.459098571724386 21.806991601592028 34.118389477281355 23.615520349402228 48 21.554664603587774 21.85590079944307 31.42685915294351 25.16257544402565 49 24.05265424500078 19.4315290285617 33.14484236629051 23.370974360147006 50 22.651913874078506 19.382365756955586 31.824166987434783 26.141553381531125 51 21.325363039636777 19.219472720736103 29.203110370909574 30.25205386871755 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1792.0 1 2549.5 2 3307.0 3 5778.0 4 8249.0 5 6462.5 6 4676.0 7 4543.0 8 4410.0 9 4605.5 10 4801.0 11 5177.5 12 5554.0 13 5549.5 14 5545.0 15 5779.5 16 6014.0 17 6146.0 18 6278.0 19 6411.0 20 6544.0 21 7409.0 22 8274.0 23 9420.5 24 10567.0 25 12099.5 26 17697.0 27 21762.0 28 24034.0 29 26306.0 30 30753.5 31 35201.0 32 41063.0 33 46925.0 34 52495.5 35 58066.0 36 66115.0 37 74164.0 38 82074.5 39 89985.0 40 99598.5 41 109212.0 42 126304.0 43 143396.0 44 169638.0 45 195880.0 46 266300.5 47 336721.0 48 360962.0 49 385203.0 50 378337.0 51 371471.0 52 316995.0 53 262519.0 54 228928.5 55 195338.0 56 173974.0 57 152610.0 58 143927.0 59 135244.0 60 122675.0 61 110106.0 62 100242.0 63 90378.0 64 80576.0 65 70774.0 66 61638.5 67 52503.0 68 45055.5 69 37608.0 70 30716.0 71 23824.0 72 19094.5 73 14365.0 74 11631.0 75 6936.0 76 4975.0 77 4131.5 78 3288.0 79 2270.0 80 1252.0 81 882.0 82 512.0 83 397.0 84 282.0 85 241.5 86 201.0 87 133.5 88 66.0 89 37.5 90 9.0 91 7.0 92 5.0 93 2.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3148692.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.999374477245563 #Duplication Level Percentage of deduplicated Percentage of total 1 64.26120060253399 16.70751018822679 2 14.165307233810138 7.365782547141304 3 6.395596862798941 4.988445535242198 4 3.4558598738777384 3.594007800073358 5 2.1128131623859576 2.746591030466298 6 1.3478904059195917 2.1026584450673997 7 0.9307344542540095 1.6938959530517341 8 0.6709787750874119 1.395602275182492 9 0.50902263951514 1.1910843199935093 >10 5.143906315166449 32.20252522060322 >50 0.9093875802139619 15.079229121192334 >100 0.08308352266641168 3.8566892411040445 >500 0.007109285885125897 1.2307004525874463 >1k 0.006170323598411081 3.000915654856856 >5k 2.6827493906135134E-4 0.5369340068586853 >10k+ 6.706873476533784E-4 2.3074282083522473 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCATGGTTGTCGTATGC 15692 0.4983656705705099 No Hit GCTGTCTCTTATACACATCTGACGCCATGGTTGTCGTATGCCGTCTTCTGC 14626 0.4645103427073845 TruSeq Adapter, Index 22 (95% over 22bp) GAATGATACCTGTCTCTTATACACATCTGACGCCATGGTTGTCGTATGCCG 13049 0.4144260537391399 No Hit CTGTCTCTTATACACATCTGACGCCATGGTTGTCGTATGCCGTCTTCTGCT 12092 0.38403248078884816 TruSeq Adapter, Index 23 (95% over 22bp) GAATCTGTCTCTTATACACATCTGACGCCATGGTTGTCGTATGCCGTCTTC 10704 0.3399506842841408 No Hit CCTGTCTCTTATACACATCTGACGCCATGGTTGTCGTATGCCGTCTTCTGC 9827 0.3120978488845527 TruSeq Adapter, Index 22 (95% over 22bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCATGGTTGTCGTATGCC 5569 0.1768670927483539 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCATGGTTGT 4877 0.15488971293476783 No Hit TCTGTCTCTTATACACATCTGACGCCATGGTTGTCGTATGCCGTCTTCTGC 4191 0.13310288843748452 TruSeq Adapter, Index 22 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3514 0.11160189691465534 No Hit ACTGTCTCTTATACACATCTGACGCCATGGTTGTCGTATGCCGTCTTCTGC 3352 0.10645690337448058 TruSeq Adapter, Index 23 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.270368775351797E-4 0.0 0.0 0.4044854180720121 0.0 2 1.270368775351797E-4 0.0 0.0 1.4804242523562166 0.0 3 1.270368775351797E-4 0.0 0.0 2.068636754563482 0.0 4 1.270368775351797E-4 0.0 0.0 2.9440478776584054 0.0 5 1.270368775351797E-4 0.0 0.0 5.321161930096688 0.0 6 1.270368775351797E-4 0.0 0.0 6.885525799284275 0.0 7 1.270368775351797E-4 0.0 0.0 8.276674885952643 0.0 8 1.270368775351797E-4 0.0 0.0 10.458723812935657 0.0 9 1.270368775351797E-4 0.0 0.0 11.240127646654548 0.0 10 1.270368775351797E-4 0.0 0.0 13.224570710631589 0.0 11 1.270368775351797E-4 0.0 0.0 15.742695697133922 0.0 12 1.270368775351797E-4 0.0 0.0 18.21969249453424 0.0 13 1.270368775351797E-4 0.0 0.0 19.03942970604937 0.0 14 1.270368775351797E-4 0.0 0.0 19.41539534511473 0.0 15 1.270368775351797E-4 0.0 0.0 20.132804351775277 0.0 16 1.270368775351797E-4 0.0 0.0 21.305862878935127 0.0 17 1.270368775351797E-4 0.0 0.0 22.62752279359175 0.0 18 1.270368775351797E-4 0.0 0.0 23.994757188064124 0.0 19 1.270368775351797E-4 0.0 0.0 25.169340157754394 0.0 20 1.270368775351797E-4 0.0 0.0 26.057042098750845 0.0 21 1.270368775351797E-4 0.0 0.0 27.056822324952712 0.0 22 1.270368775351797E-4 0.0 0.0 28.080898353983176 0.0 23 1.270368775351797E-4 0.0 0.0 28.98829101099758 0.0 24 1.270368775351797E-4 0.0 0.0 29.769536048619553 0.0 25 1.270368775351797E-4 0.0 0.0 30.48002154545443 0.0 26 1.270368775351797E-4 0.0 0.0 31.12117666637448 0.0 27 1.270368775351797E-4 0.0 0.0 31.801332108697835 0.0 28 1.270368775351797E-4 0.0 0.0 32.42670289758414 0.0 29 1.270368775351797E-4 0.0 0.0 33.139760891189106 0.0 30 1.270368775351797E-4 0.0 0.0 33.89563031252342 0.0 31 1.270368775351797E-4 0.0 0.0 34.545487459554636 0.0 32 1.270368775351797E-4 0.0 0.0 35.245810006186694 0.0 33 1.587960969189746E-4 0.0 0.0 35.93511210369258 0.0 34 1.587960969189746E-4 0.0 0.0 36.64855120793015 0.0 35 1.587960969189746E-4 0.0 0.0 37.391653423072185 0.0 36 1.587960969189746E-4 0.0 0.0 38.05967684359093 0.0 37 1.587960969189746E-4 0.0 0.0 38.75949124271285 0.0 38 1.9055531630276953E-4 0.0 0.0 39.52590472488259 0.0 39 1.9055531630276953E-4 0.0 0.0 40.58034256764396 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCGAT 310 0.0 39.919357 27 TAACGCC 430 0.0 39.76744 30 TACGGGT 435 0.0 39.310345 4 ACCGGTA 250 0.0 38.699997 41 CGTAAGG 490 0.0 38.57143 2 CGTTTTT 3275 0.0 38.267178 1 TAATACG 690 0.0 37.826088 4 CGTTATT 560 0.0 37.767857 1 CTTACGG 295 0.0 37.372883 2 ATACGGG 795 0.0 37.075474 3 TATACGC 310 0.0 37.016132 26 TCTAACG 470 0.0 36.861702 28 TTACGCC 295 0.0 36.61017 30 TACGCAT 315 0.0 36.428574 28 TACGGGC 725 0.0 36.310345 4 TGTTACG 75 1.8189894E-12 36.000004 1 GACGCGA 350 0.0 36.0 26 TAACGGG 1115 0.0 35.919285 3 CGGTATT 265 0.0 35.660374 43 GACCGAT 1365 0.0 35.604397 9 >>END_MODULE