##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935092.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4036227 Sequences flagged as poor quality 0 Sequence length 51 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.154721724025926 33.0 31.0 34.0 30.0 34.0 2 32.480265108974294 34.0 31.0 34.0 30.0 34.0 3 32.52894646411116 34.0 31.0 34.0 31.0 34.0 4 36.01578825967915 37.0 35.0 37.0 35.0 37.0 5 30.502193756694062 37.0 35.0 37.0 0.0 37.0 6 32.968816917383485 37.0 35.0 37.0 17.0 37.0 7 35.15404138568024 37.0 35.0 37.0 32.0 37.0 8 35.723136483651686 37.0 35.0 37.0 35.0 37.0 9 37.633637800847175 39.0 37.0 39.0 35.0 39.0 10 37.51054933233438 39.0 37.0 39.0 35.0 39.0 11 37.36348550267366 39.0 37.0 39.0 35.0 39.0 12 37.15793784640953 39.0 37.0 39.0 34.0 39.0 13 37.096051832565415 39.0 37.0 39.0 33.0 39.0 14 38.17422929879811 40.0 38.0 41.0 33.0 41.0 15 38.3291868866642 40.0 38.0 41.0 33.0 41.0 16 38.461810745530414 40.0 38.0 41.0 34.0 41.0 17 38.473164665912 40.0 38.0 41.0 34.0 41.0 18 38.42378885032978 40.0 37.0 41.0 34.0 41.0 19 38.39599061202455 40.0 37.0 41.0 34.0 41.0 20 38.29886995949435 40.0 37.0 41.0 34.0 41.0 21 38.25699520864411 40.0 37.0 41.0 34.0 41.0 22 38.27156029628661 40.0 37.0 41.0 34.0 41.0 23 38.20782998577632 40.0 37.0 41.0 34.0 41.0 24 38.178418855034664 40.0 37.0 41.0 34.0 41.0 25 38.105582763308405 40.0 36.0 41.0 34.0 41.0 26 38.04638316923206 40.0 36.0 41.0 34.0 41.0 27 38.00663391826079 40.0 36.0 41.0 34.0 41.0 28 37.94007101186331 40.0 36.0 41.0 34.0 41.0 29 37.92365543365128 40.0 36.0 41.0 34.0 41.0 30 37.813211694981476 40.0 36.0 41.0 33.0 41.0 31 33.214510977702695 39.0 33.0 41.0 9.0 41.0 32 34.13251633270379 39.0 33.0 41.0 16.0 41.0 33 36.066164266776866 38.0 34.0 41.0 29.0 41.0 34 36.85542413744321 38.0 35.0 41.0 31.0 41.0 35 36.982185838408 39.0 35.0 41.0 32.0 41.0 36 37.14499754349792 39.0 35.0 41.0 32.0 41.0 37 37.24352991048323 39.0 35.0 41.0 33.0 41.0 38 37.21005334932847 39.0 35.0 41.0 33.0 41.0 39 37.21189715048237 39.0 35.0 41.0 33.0 41.0 40 37.149213114128614 39.0 35.0 41.0 33.0 41.0 41 37.03760640816287 39.0 35.0 41.0 32.0 41.0 42 36.961216254685375 39.0 35.0 41.0 32.0 41.0 43 36.96561813792931 39.0 35.0 41.0 32.0 41.0 44 36.89698176044112 39.0 35.0 41.0 32.0 41.0 45 36.84151238272773 39.0 35.0 41.0 32.0 41.0 46 36.78600187749599 39.0 35.0 41.0 32.0 41.0 47 36.69037420343306 39.0 35.0 41.0 32.0 41.0 48 36.64038791673511 38.0 35.0 41.0 32.0 41.0 49 36.596539788272565 38.0 35.0 41.0 32.0 41.0 50 36.41047765648463 38.0 35.0 40.0 31.0 41.0 51 35.790402521959244 37.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 12.0 9 12.0 10 41.0 11 43.0 12 43.0 13 53.0 14 78.0 15 148.0 16 224.0 17 414.0 18 811.0 19 1405.0 20 2284.0 21 3619.0 22 5651.0 23 8791.0 24 13120.0 25 18463.0 26 24158.0 27 29804.0 28 36382.0 29 45350.0 30 60280.0 31 86206.0 32 126168.0 33 153907.0 34 292340.0 35 366434.0 36 465212.0 37 482216.0 38 681904.0 39 1129510.0 40 1143.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.04821160950561 21.718872600574745 25.771345367839814 11.461570422079829 2 32.68034726490854 23.592280612562178 25.668105386540454 18.05926673598883 3 32.54653417659611 23.725474310538033 26.275702531101448 17.452288981764404 4 28.84525573016582 25.833110972202505 25.983721926442687 19.337911371188984 5 22.80989151502133 39.080185529703854 21.211368934403342 16.898554020871472 6 28.166750779874373 32.955034491370284 23.565473398795458 15.312741329959886 7 82.76561253864067 5.432177129779866 7.182227362336162 4.619982969243306 8 84.54504664876382 4.0584436901096 7.090929226725851 4.305580434400741 9 78.4362970665426 6.311488427187073 9.058038608829484 6.194175897440853 10 45.18866258017698 23.480616922685467 15.704493330033223 15.626227167104329 11 31.6437355976262 23.213808341304887 24.10451642090497 21.037939640163945 12 28.139943566107657 20.90511757639003 29.350182732537096 21.60475612496522 13 25.880655374437563 20.89587627256842 31.610709704880325 21.612758648113697 14 21.327863868905293 23.4653551447924 32.93746858142518 22.269312404877127 15 21.008704416277876 23.65389756324409 33.16084551240552 22.176552508072515 16 26.169167393211527 23.599688520987545 28.432072824447186 21.799071261353735 17 26.6577920419243 23.952096846882 26.692056715343316 22.69805439585038 18 26.38312959107602 23.34687816121343 28.05426949475339 22.215722752957156 19 25.662159239309386 25.209211473983007 26.390983460543723 22.73764582616389 20 26.183636351473787 27.068299181388955 26.471380326230413 20.27668414090684 21 25.818567687099858 24.615984185230413 28.58516134003365 20.980286787636075 22 25.20425635129045 22.056886295047327 29.258190879749822 23.480666473912393 23 24.765926197907103 23.59614560826237 28.746376256835905 22.891551936994624 24 24.306734977988107 24.07429017248039 28.050577928347437 23.568396921184064 25 24.27323834858644 25.233318145882283 26.45688659235469 24.03655691317659 26 23.224461855093878 25.14541426931637 26.703973785418906 24.926150090170847 27 22.88077454513832 23.658704032255866 29.007585549573893 24.452935873031915 28 21.75801806984592 24.45244036076266 27.808842267791185 25.98069930160023 29 22.4668483710158 24.680128248485527 27.477765745088174 25.3752576354105 30 24.514404170033053 23.548675532867698 28.440224001276437 23.496696295822808 31 26.633809248092337 24.9790212493004 26.46652430599171 21.920645196615553 32 24.888416830867044 24.321005731342662 27.103059367077226 23.68751807071307 33 25.623013770038206 23.59443609093344 27.42296208810852 23.359588050919832 34 24.30737914393814 23.367218939866365 29.0363995880311 23.289002328164397 35 24.07805606572673 25.982235389634923 27.176122651178936 22.76358589345941 36 25.373696771762344 25.63569888413115 26.03684084170687 22.953763502399642 37 24.197301093323045 25.407961445181353 27.75579767936739 22.638939782128208 38 23.47974977621427 25.625144472796002 27.351038482226098 23.544067268763623 39 24.52986415283382 23.716233006716422 26.14662158496041 25.607281255489344 40 25.482610368544684 23.217549458937764 27.432401596837842 23.86743857567971 41 22.42695963334074 24.976890546542602 26.32408930419424 26.27206051592242 42 21.886504401263853 24.019684720408442 29.132950153695518 24.960860724632187 43 22.26849480963286 22.745797002993143 29.838460522661386 25.147247664712612 44 23.69153172009404 22.897919269654558 27.907176677624925 25.503372332626483 45 23.438399277344907 22.40344757616457 27.228795605400784 26.929357541089736 46 23.66113204237522 23.145824057963043 27.78337293715145 25.409670962510283 47 21.493389742450063 24.221928053105042 29.674173429789754 24.610508774655145 48 21.719070805482446 24.32920645939884 29.52063895316096 24.431083781957756 49 24.083655354369316 22.55794830171841 29.25078297132446 24.107613372587817 50 22.68487376948819 22.77027530909436 29.1417454964748 25.403105424942652 51 22.322926832410566 22.914791462422706 27.450339140984887 27.311942564181845 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1088.0 1 2382.0 2 3676.0 3 9064.0 4 14452.0 5 10524.5 6 6597.0 7 6375.0 8 6153.0 9 6349.0 10 6545.0 11 6735.0 12 6925.0 13 7009.0 14 7093.0 15 7197.5 16 7302.0 17 7841.5 18 8381.0 19 8576.0 20 8771.0 21 9524.0 22 10277.0 23 11575.5 24 12874.0 25 15727.0 26 22966.0 27 27352.0 28 33327.5 29 39303.0 30 44477.5 31 49652.0 32 57421.5 33 65191.0 34 76782.5 35 88374.0 36 97368.5 37 106363.0 38 117241.0 39 128119.0 40 136656.5 41 145194.0 42 162339.5 43 179485.0 44 200768.5 45 222052.0 46 255767.5 47 289483.0 48 322711.0 49 355939.0 50 358761.5 51 361584.0 52 331765.5 53 301947.0 54 283680.0 55 265413.0 56 261399.0 57 257385.0 58 253747.0 59 250109.0 60 231783.5 61 213458.0 62 188892.5 63 164327.0 64 147610.0 65 130893.0 66 111425.5 67 91958.0 68 79503.5 69 67049.0 70 56530.0 71 46011.0 72 39795.0 73 33579.0 74 26566.5 75 14615.5 76 9677.0 77 7321.0 78 4965.0 79 3396.0 80 1827.0 81 1277.5 82 728.0 83 583.0 84 438.0 85 262.5 86 87.0 87 49.5 88 12.0 89 7.0 90 2.0 91 1.5 92 1.0 93 1.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4036227.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.730011260055015 #Duplication Level Percentage of deduplicated Percentage of total 1 70.10960956646487 15.935922148838074 2 12.193289232284615 5.543072030938738 3 4.922880226666778 3.356913689521142 4 2.4085673940017536 2.1898705594504495 5 1.4250127120965246 1.6195277495837772 6 0.8687055287175283 1.1847411869652877 7 0.6151816309307265 0.9788159778624097 8 0.4786732944601495 0.8704199498373465 9 0.36526355834964697 0.7472200314757714 >10 4.202615838012956 23.823216219095613 >50 2.1849123470393037 34.882979785272575 >100 0.21831175509056958 6.609629170032405 >500 0.0036720609919087526 0.5544923782450887 >1k 0.002937648793526423 1.1802647099804067 >5k 3.672060991908029E-4 0.5229144129008945 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6952 0.17224006479318432 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 6330 0.15682963321934074 No Hit CTGTCTCTTATACACATCTGACGCCTTTGGACTCGTATGCCGTCTTCTGCT 5513 0.13658795702025678 TruSeq Adapter, Index 21 (95% over 23bp) GCTGTCTCTTATACACATCTGACGCCTTTGGACTCGTATGCCGTCTTCTGC 4951 0.12266406225417946 TruSeq Adapter, Index 14 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.2298052116493945E-4 0.0 0.0 0.1436985580840721 0.0 2 2.477561346277105E-4 0.0 0.0 0.4548307119495509 0.0 3 2.477561346277105E-4 0.0 0.0 0.6858633074898909 0.0 4 2.477561346277105E-4 0.0 0.0 1.01711325948714 0.0 5 2.477561346277105E-4 0.0 0.0 1.9358921091405414 0.0 6 2.477561346277105E-4 0.0 0.0 2.774794380989969 0.0 7 2.477561346277105E-4 0.0 0.0 3.438062329001813 0.0 8 2.7253174809048155E-4 0.0 0.0 4.516173148834295 0.0 9 2.7253174809048155E-4 0.0 0.0 4.973085012314718 0.0 10 2.7253174809048155E-4 0.0 0.0 5.7817610357395655 0.0 11 2.7253174809048155E-4 0.0 0.0 7.011746366098834 0.0 12 3.220829750160236E-4 0.0 0.0 7.941005300246988 0.0 13 3.468585884787947E-4 0.0 0.0 8.33030451458751 0.0 14 3.468585884787947E-4 0.0 0.0 8.534678550041908 0.0 15 3.468585884787947E-4 0.0 0.0 8.823809959152445 0.0 16 3.468585884787947E-4 0.0 0.0 9.352942735876848 0.0 17 3.716342019415657E-4 0.0 0.0 9.988338118743073 0.0 18 3.716342019415657E-4 0.0 0.0 10.63347031770017 0.0 19 3.716342019415657E-4 0.0 0.0 11.1070809446545 0.0 20 3.964098154043368E-4 0.0 0.0 11.542041614606909 0.0 21 3.964098154043368E-4 0.0 0.0 12.062007414350084 0.0 22 3.964098154043368E-4 0.0 0.0 12.661403830854905 0.0 23 3.964098154043368E-4 0.0 0.0 13.182583635657757 0.0 24 4.459610423298789E-4 0.0 0.0 13.622548979529645 0.0 25 4.459610423298789E-4 0.0 0.0 14.02564821056893 0.0 26 4.707366557926499E-4 0.0 0.0 14.392104309296776 0.0 27 4.707366557926499E-4 0.0 0.0 14.787795631910694 0.0 28 4.707366557926499E-4 0.0 0.0 15.157893745817567 0.0 29 4.707366557926499E-4 0.0 0.0 15.588345254119751 0.0 30 4.707366557926499E-4 0.0 0.0 16.096592188695038 0.0 31 4.95512269255421E-4 0.0 0.0 16.50254061528254 0.0 32 4.95512269255421E-4 0.0 0.0 16.950731462824066 0.0 33 4.95512269255421E-4 0.0 0.0 17.423028982264874 0.0 34 4.95512269255421E-4 0.0 0.0 17.930433545982424 0.0 35 4.95512269255421E-4 0.0 0.0 18.45208408744107 0.0 36 6.193903365692762E-4 0.0 0.0 18.92524875335307 0.0 37 6.441659500320472E-4 0.0 0.0 19.421157432423893 0.0 38 6.441659500320472E-4 0.0 0.0 19.990649683479152 0.0 39 6.441659500320472E-4 0.0 0.0 20.838297746880937 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGGGT 430 0.0 40.2907 4 CGTTATT 760 0.0 38.486843 1 TACCGGT 395 0.0 37.594936 40 TTACGCG 175 0.0 37.285717 1 GTATACG 105 0.0 36.42857 1 TATAACG 100 0.0 36.000004 1 CGTTTTT 4845 0.0 35.665634 1 ACGGGTA 425 0.0 34.941177 5 CGTATGG 555 0.0 34.864864 2 TAACGGG 1550 0.0 34.693546 3 TACGGGA 1495 0.0 34.615383 4 GGGCGAT 6120 0.0 34.558826 7 CGAATAT 320 0.0 34.45313 14 CGTAAGG 785 0.0 34.394905 2 TTACGGG 1385 0.0 34.277977 3 AGTACGG 740 0.0 34.054054 2 TATGGGC 1845 0.0 33.780487 4 AACGGGA 1740 0.0 33.75 4 TAGGGAC 1855 0.0 33.47709 5 CTTAACG 135 0.0 33.333336 1 >>END_MODULE