##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935087.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1552990 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.00321766399011 33.0 31.0 34.0 30.0 34.0 2 32.321098010933746 34.0 31.0 34.0 30.0 34.0 3 32.37696314850707 34.0 31.0 34.0 30.0 34.0 4 35.90423312448889 37.0 35.0 37.0 35.0 37.0 5 30.3932761962408 37.0 35.0 37.0 0.0 37.0 6 32.86911119839793 37.0 35.0 37.0 17.0 37.0 7 35.04915163652052 37.0 35.0 37.0 32.0 37.0 8 35.588335404606596 37.0 35.0 37.0 35.0 37.0 9 37.43647801981983 39.0 37.0 39.0 35.0 39.0 10 37.38363608265346 39.0 37.0 39.0 34.0 39.0 11 37.294670281199494 39.0 37.0 39.0 34.0 39.0 12 37.1923502405038 39.0 37.0 39.0 34.0 39.0 13 37.16452198661936 39.0 37.0 39.0 34.0 39.0 14 38.353755658439525 40.0 38.0 41.0 34.0 41.0 15 38.44999195101063 40.0 38.0 41.0 34.0 41.0 16 38.52029182415856 40.0 38.0 41.0 34.0 41.0 17 38.51168455688704 40.0 38.0 41.0 34.0 41.0 18 38.46348849638439 40.0 38.0 41.0 34.0 41.0 19 38.46335906863534 40.0 38.0 41.0 34.0 41.0 20 38.386306415366484 40.0 37.0 41.0 34.0 41.0 21 38.33553274650835 40.0 37.0 41.0 34.0 41.0 22 38.324988570435096 40.0 37.0 41.0 34.0 41.0 23 38.2626262886432 40.0 37.0 41.0 34.0 41.0 24 38.24107753430479 40.0 37.0 41.0 34.0 41.0 25 38.18534375623797 40.0 37.0 41.0 34.0 41.0 26 38.11694151282365 40.0 37.0 41.0 34.0 41.0 27 38.07934307368367 40.0 37.0 41.0 34.0 41.0 28 38.02942581729438 40.0 37.0 41.0 34.0 41.0 29 38.02801692219525 40.0 37.0 41.0 34.0 41.0 30 37.869285056568295 40.0 36.0 41.0 33.0 41.0 31 33.248338366634684 39.0 33.0 41.0 9.0 41.0 32 34.19570248359616 39.0 33.0 41.0 16.0 41.0 33 36.12893515090245 39.0 34.0 41.0 30.0 41.0 34 36.940161881274186 39.0 35.0 41.0 31.0 41.0 35 37.12938975782201 39.0 35.0 41.0 32.0 41.0 36 37.28682090676695 39.0 35.0 41.0 33.0 41.0 37 37.369157560576696 39.0 35.0 41.0 33.0 41.0 38 37.37051494214386 39.0 35.0 41.0 33.0 41.0 39 37.396473254818126 39.0 35.0 41.0 33.0 41.0 40 37.325488895614264 39.0 35.0 41.0 33.0 41.0 41 37.282351463950185 39.0 35.0 41.0 33.0 41.0 42 37.2479275462173 39.0 35.0 41.0 33.0 41.0 43 37.25794499642625 39.0 35.0 41.0 33.0 41.0 44 37.19050927565535 39.0 35.0 41.0 33.0 41.0 45 37.16223736147689 39.0 35.0 41.0 33.0 41.0 46 37.08414091526668 39.0 35.0 41.0 32.0 41.0 47 36.99465804673565 39.0 35.0 41.0 32.0 41.0 48 37.013097959420215 39.0 35.0 41.0 32.0 41.0 49 36.99552476191089 39.0 35.0 41.0 32.0 41.0 50 36.81927250014488 39.0 35.0 41.0 32.0 41.0 51 36.23025389732065 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 9.0 10 16.0 11 17.0 12 7.0 13 20.0 14 38.0 15 51.0 16 90.0 17 141.0 18 252.0 19 488.0 20 798.0 21 1275.0 22 2170.0 23 3397.0 24 4893.0 25 6341.0 26 7955.0 27 9913.0 28 12491.0 29 16170.0 30 21320.0 31 30259.0 32 46330.0 33 56122.0 34 100689.0 35 147855.0 36 183787.0 37 186705.0 38 284662.0 39 428325.0 40 403.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.25816006542218 21.997244026040093 24.4067250915975 11.337870816940224 2 30.565489797101076 24.925530750358984 25.899716031655068 18.609263420884876 3 31.42666726765787 24.812200980044945 26.03262094411426 17.728510808182925 4 28.012801112692294 26.765272152428544 26.41530209466899 18.806624640210178 5 22.762413151404708 39.43901763694551 20.419706501651653 17.37886270999813 6 26.484909754731195 33.88540814815292 23.48225036864371 16.14743172847217 7 77.31987971590287 7.0185899458464 9.467865214843624 6.193665123407105 8 77.04608529353054 6.473061642380183 9.372693964545812 7.108159099543461 9 71.13735439378232 8.318147573390686 12.12506197721814 8.419436055608857 10 38.61177470556797 25.33828292519591 19.63992041159312 16.410021957642996 11 28.13501696726959 25.81021126987296 24.881100329042685 21.17367143381477 12 25.49256595341889 22.771106059923117 30.832136716913823 20.90419126974417 13 23.50858666185874 24.79687570428657 31.48758201920167 20.206955614653026 14 19.164514903508714 28.621433492810645 29.911589900772057 22.302461702908584 15 17.9467350079524 27.06720584163452 33.730352416950524 21.255706733462546 16 20.0138442617145 26.961989452604328 29.897166111822997 23.12700017385817 17 20.53509681324413 26.842800018029738 27.560769869735157 25.061333298990977 18 20.780816360697752 26.953296544085926 30.25982137682793 22.0060657183884 19 22.027443834152184 28.07332951274638 27.54364162035815 22.35558503274329 20 22.997636816721293 28.442166401586615 27.79064900611079 20.769547775581298 21 22.05777242609418 28.637209511973676 28.44435572669496 20.860662335237187 22 20.64623725844983 26.653809747648083 27.045505766295985 25.654447227606102 23 20.380427433531445 27.27596442990618 28.428837275191725 23.914770861370645 24 21.638516667847185 25.246202486815754 29.4247870237413 23.69049382159576 25 20.029555888962584 27.77364954056369 27.11788227870109 25.078912291772642 26 19.01918235146395 27.858324908724462 28.381831177277384 24.740661562534207 27 21.090670255442724 27.2048757558001 27.79844042781988 23.90601356093729 28 18.169080290278753 27.670300517067076 28.774364290819644 25.386254901834526 29 19.328392327059415 25.72824036214013 28.05948525103188 26.883882059768577 30 20.424278327613184 26.935588767474357 26.36733011803038 26.272802786882078 31 22.579346937198565 30.712045795529914 22.922105100483584 23.786502166787937 32 19.749579842754944 28.785890443595903 24.705181617396118 26.75934809625303 33 20.003155203832605 27.21376184006336 23.98830642824487 28.794776527859163 34 18.16341380176305 28.528837919110877 26.575316003322623 26.732432275803454 35 18.68221946052454 27.062376448013186 26.182976065525214 28.072428025937064 36 19.463937308031603 28.555302996155802 25.237380794467445 26.74337890134515 37 18.847706681949013 30.506828762580568 26.211759251508383 24.433705303962032 38 18.18170110560918 29.583963837500566 24.70299229228778 27.531342764602478 39 20.56896696050844 26.016394181546566 25.81375282519527 27.600886032749727 40 20.825182390099098 26.26797339326074 27.946863791782306 24.959980424857857 41 17.81769361039028 28.523171430595173 25.64163323653082 28.017501722483722 42 19.746746598497094 26.319744492881476 27.106613693584634 26.8268952150368 43 20.571027501786876 24.280259370633424 28.07519687827996 27.07351624929974 44 19.872182048821948 25.18651118165603 26.602167431857254 28.339139337664765 45 19.880102254360942 24.349609463035822 26.16610538380801 29.60418289879523 46 20.533873366860057 25.999587891744312 27.146150329364644 26.320388412030987 47 17.646990643854757 26.04768865221283 30.267226447047307 26.03809425688511 48 18.029607402494545 24.47858646868299 29.074108654917293 28.41769747390518 49 20.136510859696457 23.18257039646102 29.830649263678456 26.85026948016407 50 18.725040083967055 22.799309718671722 30.072440904320054 28.403209293041165 51 17.864764100219578 23.080380427433532 27.305649102698666 31.749206369648224 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1248.0 1 1803.5 2 2359.0 3 2840.0 4 3321.0 5 2724.0 6 2127.0 7 2156.0 8 2185.0 9 2298.0 10 2411.0 11 2558.5 12 2706.0 13 2759.5 14 2813.0 15 2936.5 16 3060.0 17 3039.0 18 3018.0 19 3275.5 20 3533.0 21 4031.5 22 4530.0 23 5380.5 24 6231.0 25 8244.5 26 11945.5 27 13633.0 28 16193.0 29 18753.0 30 22985.0 31 27217.0 32 29918.0 33 32619.0 34 34711.0 35 36803.0 36 41477.5 37 46152.0 38 49493.0 39 52834.0 40 59024.5 41 65215.0 42 75594.0 43 85973.0 44 98571.5 45 111170.0 46 129866.5 47 148563.0 48 169278.5 49 189994.0 50 180178.5 51 170363.0 52 144197.0 53 118031.0 54 100849.5 55 83668.0 56 74644.0 57 65620.0 58 61722.0 59 57824.0 60 53830.5 61 49837.0 62 45884.5 63 41932.0 64 35628.0 65 29324.0 66 24963.0 67 20602.0 68 18039.5 69 15477.0 70 12450.5 71 9424.0 72 7373.0 73 5322.0 74 4140.0 75 2467.5 76 1977.0 77 1521.0 78 1065.0 79 812.5 80 560.0 81 363.5 82 167.0 83 105.0 84 43.0 85 50.0 86 57.0 87 35.0 88 13.0 89 6.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1552990.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.457409080391553 #Duplication Level Percentage of deduplicated Percentage of total 1 66.48922550941732 16.926434132316423 2 13.718756661059322 6.984880007898673 3 5.877605542204873 4.488858261032581 4 3.214568120099674 3.2733830260065058 5 1.875821649203904 2.387677954281926 6 1.2833854918774736 1.9603001684738621 7 0.8370556197261834 1.4916487134087082 8 0.6120977708848415 1.2465938680488953 9 0.44895509045552373 1.0286310056805414 >10 4.010757836718383 24.718004970670975 >50 1.4861250140541893 25.4025253702449 >100 0.13338979440116694 5.8745171934894005 >500 0.007980585979519818 1.4224455296473733 >1k 0.003420251134079922 1.3144052626791556 >5k 8.550627835199805E-4 1.4796945361201224 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGCT 7797 0.5020637608741847 RNA PCR Primer, Index 16 (95% over 24bp) GCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGC 6911 0.44501252422745796 RNA PCR Primer, Index 14 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGC 5685 0.3660680364973374 RNA PCR Primer, Index 16 (95% over 23bp) TCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGC 2320 0.14938924268668827 RNA PCR Primer, Index 14 (95% over 23bp) ACTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGC 1958 0.1260793694743688 RNA PCR Primer, Index 14 (95% over 23bp) GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA 1818 0.11706450138120658 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCC 1646 0.10598909200960727 No Hit TGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGCTT 1617 0.10412172647602366 RNA PCR Primer, Index 14 (96% over 25bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.575676598046349E-4 0.0 0.0 0.5325855285610339 0.0 2 2.575676598046349E-4 0.0 0.0 1.6918331734267444 0.0 3 2.575676598046349E-4 0.0 0.0 2.3598348991300653 0.0 4 2.575676598046349E-4 0.0 0.0 3.1668587692129377 0.0 5 2.575676598046349E-4 0.0 0.0 5.155538670564524 0.0 6 2.575676598046349E-4 0.0 0.0 6.536165719032319 0.0 7 2.575676598046349E-4 0.0 0.0 7.7188520209402505 0.0 8 2.575676598046349E-4 0.0 0.0 9.738504433383344 0.0 9 2.575676598046349E-4 0.0 0.0 10.44791016040026 0.0 10 2.575676598046349E-4 0.0 0.0 11.939742045988705 0.0 11 2.575676598046349E-4 0.0 0.0 14.195841570132455 0.0 12 2.575676598046349E-4 0.0 0.0 15.96333524362681 0.0 13 2.575676598046349E-4 0.0 0.0 16.71086098429481 0.0 14 2.575676598046349E-4 0.0 0.0 17.005067643706656 0.0 15 2.575676598046349E-4 0.0 0.0 17.598181572321778 0.0 16 3.2195957475579366E-4 0.0 0.0 18.659811074121535 0.0 17 3.2195957475579366E-4 0.0 0.0 19.92292287780346 0.0 18 3.863514897069524E-4 0.0 0.0 21.372900018673654 0.0 19 3.863514897069524E-4 0.0 0.0 22.18784409429552 0.0 20 3.863514897069524E-4 0.0 0.0 22.949471664337825 0.0 21 3.863514897069524E-4 0.0 0.0 23.813675554897326 0.0 22 3.863514897069524E-4 0.0 0.0 24.667061603745033 0.0 23 3.863514897069524E-4 0.0 0.0 25.49527041384684 0.0 24 3.863514897069524E-4 0.0 0.0 26.180722348501924 0.0 25 3.863514897069524E-4 0.0 0.0 26.78864641755581 0.0 26 3.863514897069524E-4 0.0 0.0 27.34763263124682 0.0 27 3.863514897069524E-4 0.0 0.0 27.85877565212912 0.0 28 4.5074340465811114E-4 0.0 0.0 28.397671588355365 0.0 29 4.5074340465811114E-4 0.0 0.0 28.95034739438116 0.0 30 4.5074340465811114E-4 0.0 0.0 29.558400247264952 0.0 31 4.5074340465811114E-4 0.0 0.0 30.120219705213813 0.0 32 4.5074340465811114E-4 0.0 0.0 30.750294593010903 0.0 33 4.5074340465811114E-4 0.0 0.0 31.348495482907165 0.0 34 4.5074340465811114E-4 0.0 0.0 31.951976509829425 0.0 35 4.5074340465811114E-4 0.0 0.0 32.59911525508857 0.0 36 4.5074340465811114E-4 0.0 0.0 33.211675542018945 0.0 37 4.5074340465811114E-4 0.0 0.0 33.795710210625955 0.0 38 4.5074340465811114E-4 0.0 0.0 34.38393035370479 0.0 39 4.5074340465811114E-4 0.0 0.0 34.96867333337626 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTACGTT 20 7.034052E-4 45.000004 26 TGCGAAC 20 7.034052E-4 45.000004 32 GTCGTAC 20 7.034052E-4 45.000004 43 ACGCGCG 20 7.034052E-4 45.000004 1 ATATCCG 25 3.891441E-5 45.0 17 CGGTCTA 35 1.2123019E-7 45.0 31 ATACGCG 30 2.1659962E-6 44.999996 1 ACGTAAG 85 0.0 42.352943 1 CGGGTAC 120 0.0 41.249996 6 CGTATGG 165 0.0 40.90909 2 TCGTATA 95 0.0 40.263157 29 GTCGATG 45 1.9290383E-8 40.0 1 TCGATGG 165 0.0 39.545452 2 GCGTATG 120 0.0 39.374996 1 TGCGTAG 75 0.0 39.0 1 TCGCTCA 215 0.0 38.720932 31 CCTACGG 35 6.2497074E-6 38.571426 2 CGGATCG 35 6.2497074E-6 38.571426 31 CACTACG 35 6.2497074E-6 38.571426 1 AACGCTA 35 6.2497074E-6 38.571426 18 >>END_MODULE