##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935086.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2673609 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.066245662697874 33.0 31.0 34.0 30.0 34.0 2 32.38064129796092 34.0 31.0 34.0 30.0 34.0 3 32.44179496702771 34.0 31.0 34.0 30.0 34.0 4 35.94334137863839 37.0 35.0 37.0 35.0 37.0 5 30.40683585370935 37.0 35.0 37.0 0.0 37.0 6 32.895615626667926 37.0 35.0 37.0 17.0 37.0 7 35.08843589320652 37.0 35.0 37.0 32.0 37.0 8 35.63334130009287 37.0 35.0 37.0 35.0 37.0 9 37.50808850508807 39.0 37.0 39.0 35.0 39.0 10 37.425445530741406 39.0 37.0 39.0 35.0 39.0 11 37.31506701241655 39.0 37.0 39.0 34.0 39.0 12 37.19540665819123 39.0 37.0 39.0 34.0 39.0 13 37.186971617764605 39.0 37.0 39.0 34.0 39.0 14 38.41616406886721 40.0 38.0 41.0 34.0 41.0 15 38.50658342338016 40.0 38.0 41.0 34.0 41.0 16 38.55468694188268 40.0 38.0 41.0 34.0 41.0 17 38.543451940803614 40.0 38.0 41.0 34.0 41.0 18 38.51189160419493 40.0 38.0 41.0 34.0 41.0 19 38.50491676232389 40.0 38.0 41.0 34.0 41.0 20 38.430280194299165 40.0 38.0 41.0 34.0 41.0 21 38.390609846091934 40.0 37.0 41.0 34.0 41.0 22 38.37293785291716 40.0 37.0 41.0 34.0 41.0 23 38.31605444176766 40.0 37.0 41.0 34.0 41.0 24 38.31032248918971 40.0 37.0 41.0 34.0 41.0 25 38.21692251933622 40.0 37.0 41.0 34.0 41.0 26 38.139187517696115 40.0 37.0 41.0 34.0 41.0 27 38.07604627303394 40.0 37.0 41.0 34.0 41.0 28 37.99811116733973 40.0 37.0 41.0 34.0 41.0 29 38.00209454710842 40.0 37.0 41.0 34.0 41.0 30 37.861306571005706 40.0 36.0 41.0 33.0 41.0 31 33.28086866853007 39.0 33.0 41.0 9.0 41.0 32 34.20940608742715 39.0 33.0 41.0 16.0 41.0 33 36.129146408468856 39.0 34.0 41.0 30.0 41.0 34 36.98691992733418 39.0 35.0 41.0 31.0 41.0 35 37.18041269310509 39.0 35.0 41.0 32.0 41.0 36 37.302240903587624 39.0 35.0 41.0 32.0 41.0 37 37.41021443300049 39.0 35.0 41.0 33.0 41.0 38 37.40129278439742 40.0 35.0 41.0 33.0 41.0 39 37.403491310808725 40.0 35.0 41.0 33.0 41.0 40 37.35496364651675 39.0 35.0 41.0 33.0 41.0 41 37.29930143113671 39.0 35.0 41.0 33.0 41.0 42 37.206093336759416 39.0 35.0 41.0 32.0 41.0 43 37.18235426346934 39.0 35.0 41.0 32.0 41.0 44 37.103450429737485 39.0 35.0 41.0 32.0 41.0 45 37.03911155296081 39.0 35.0 41.0 32.0 41.0 46 36.96096063410918 39.0 35.0 41.0 32.0 41.0 47 36.864209388882216 39.0 35.0 41.0 32.0 41.0 48 36.85127107217248 39.0 35.0 41.0 32.0 41.0 49 36.80528977872232 39.0 35.0 41.0 32.0 41.0 50 36.583871089602106 39.0 35.0 41.0 31.0 41.0 51 35.920495480079545 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 9.0 10 26.0 11 25.0 12 21.0 13 37.0 14 49.0 15 85.0 16 127.0 17 238.0 18 431.0 19 698.0 20 1267.0 21 2069.0 22 3452.0 23 5535.0 24 8050.0 25 11057.0 26 13972.0 27 17307.0 28 22144.0 29 28788.0 30 37890.0 31 52861.0 32 81180.0 33 97231.0 34 173887.0 35 253056.0 36 312739.0 37 326796.0 38 475152.0 39 746629.0 40 798.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.34265369393954 21.322265147970402 25.531706393866866 10.803374764223191 2 31.983584735090286 24.613771123601094 25.29700490984284 18.105639231465783 3 32.85861919226035 23.418757192992693 25.88291706079685 17.839706553950112 4 28.74234789006171 26.49531027162162 25.545470560579354 19.216871277737322 5 22.48271905128985 40.26332945468092 20.41229663724202 16.841654856787212 6 27.95072129095915 34.20148570714716 22.38689352107956 15.460899480814136 7 80.59338519581584 6.557652970198709 7.741371307472409 5.107590526513039 8 81.0400099640598 5.725556728751287 7.575565462264677 5.65886784492422 9 74.57062719343031 7.52537113691643 10.304872552418846 7.59912911723442 10 40.52888810592723 25.21722510658814 17.785248329131147 16.468638458353485 11 30.47831601404693 26.037614325804558 23.52344714578684 19.960622514361674 12 26.73812812569078 23.708664954374406 28.892594242464025 20.660612677470787 13 25.318698433465777 23.8410702537282 30.526565402794496 20.313665910011526 14 20.98324773742159 27.080885798933203 29.424945831645537 22.510920631999667 15 21.215518050694772 26.651915070603067 31.40881856696323 20.723748311738927 16 23.49973388030935 26.019997688517655 28.916270105314577 21.563998325858417 17 22.83093750806494 25.96329530608253 27.532485116559673 23.673282069292856 18 23.4860071162238 25.363955612058458 29.05368735667781 22.096349915039934 19 23.814140362334207 27.22840175956918 27.16309677293875 21.794361105157858 20 24.57621888615725 27.694101867550565 27.616192195642668 20.113487050649514 21 24.458625027070152 26.961459211126233 27.902883331107876 20.67703243069574 22 22.292302277558164 25.41512240570704 27.79228376325783 24.500291553476966 23 22.04765169476913 26.44208633349155 28.20087005990779 23.309391911831536 24 22.890295477012533 25.10872008584651 28.36832162070071 23.63266281644025 25 22.615273961151388 26.778896989051127 26.469315445901024 24.136513603896457 26 21.947898888730553 27.74571749272238 27.188979390778535 23.117404227768535 27 22.542787670149224 27.150230269272736 27.510006137771082 22.79697592280696 28 20.891686106682016 27.61413505116118 27.757536722834192 23.73664211932261 29 23.181549732963944 26.643649090050193 26.369861860877936 23.80493931610793 30 22.998987510888842 28.898316844385246 25.7358499316841 22.366845713041812 31 25.262108258911457 30.13716665376276 23.006505438902998 21.59421964842279 32 25.09761150564649 28.902992172752263 23.799852558844616 22.199543762756633 33 23.371368064664654 29.45628923301799 24.162171805974623 23.010170896342732 34 22.094217965304573 29.103058824233464 25.49303207761494 23.309691132847025 35 24.720929649773023 27.36967148150683 25.311255310705494 22.59814355801465 36 22.588979914415308 30.424007399735714 24.553926920503336 22.43308576534564 37 22.913260689951297 30.568231929201318 25.413813313764276 21.10469406708311 38 23.29274774284497 29.104891552953333 24.90510018480638 22.697260519395318 39 23.69624728223162 26.73236812114262 26.040756146467192 23.53062845015857 40 23.341819989385133 26.92521606562515 27.591768280253394 22.14119566473632 41 21.499366586512835 27.648171441673036 25.953907246721563 24.898554725092563 42 22.996481534884122 26.484800133452573 26.22339317379617 24.295325157867136 43 23.072521075445213 25.497557795474208 27.285852194543033 24.14406893453755 44 22.323383860542062 26.528897830610237 26.02302730129948 25.124691007548222 45 23.11676838311062 26.08279669914337 25.838445337369826 24.961989580376187 46 23.645978151629503 27.193280692876183 25.95559036493369 23.205150790560623 47 20.99110228907817 27.2205472079126 28.36753616553505 23.420814337474177 48 21.481375922956573 25.500550005629098 27.87168954024317 25.14638453117116 49 22.809692815965235 24.751674609114495 28.64798106230193 23.79065151261834 50 21.546905325348618 25.067315377828248 28.55668124995091 24.829098046872225 51 21.588197825486073 24.56107082224813 26.260346969209035 27.590384383056758 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1178.0 1 2127.0 2 3076.0 3 4291.0 4 5506.0 5 4471.0 6 3436.0 7 3368.5 8 3301.0 9 3474.0 10 3647.0 11 3928.0 12 4209.0 13 4338.0 14 4467.0 15 4536.0 16 4605.0 17 4687.0 18 4769.0 19 5099.5 20 5430.0 21 6706.5 22 7983.0 23 9376.0 24 10769.0 25 12929.0 26 19704.5 27 24320.0 28 28218.5 29 32117.0 30 37847.5 31 43578.0 32 47551.0 33 51524.0 34 59278.0 35 67032.0 36 70959.0 37 74886.0 38 84476.0 39 94066.0 40 103990.5 41 113915.0 42 127925.5 43 141936.0 44 160392.0 45 178848.0 46 205320.0 47 231792.0 48 260459.5 49 289127.0 50 281145.5 51 273164.0 52 239235.0 53 205306.0 54 183260.5 55 161215.0 56 145348.5 57 129482.0 58 123580.0 59 117678.0 60 110570.0 61 103462.0 62 94231.5 63 85001.0 64 73571.5 65 62142.0 66 51729.0 67 41316.0 68 34032.5 69 26749.0 70 22490.0 71 18231.0 72 15839.0 73 13447.0 74 10382.0 75 6075.5 76 4834.0 77 3384.0 78 1934.0 79 1474.0 80 1014.0 81 744.5 82 475.0 83 338.0 84 201.0 85 112.0 86 23.0 87 17.0 88 11.0 89 5.5 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2673609.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.859687841310702 #Duplication Level Percentage of deduplicated Percentage of total 1 66.45349636350575 15.855596791969232 2 13.494586200111472 6.439532285646377 3 5.889835555409893 4.215889133661987 4 3.1837942970948117 3.038573523185097 5 1.850758596470991 2.2079261190710078 6 1.203711456483406 1.7232107761622113 7 0.7995688722460746 1.3354224589594126 8 0.6127745788852602 1.169648813543434 9 0.4458647813617159 0.957437505245231 >10 4.086062311676076 23.858973032989734 >50 1.7756201786485275 29.17443801688937 >100 0.194577578326937 6.934762090794664 >500 0.005115616294234593 0.8244740440282058 >1k 0.003704411799273326 1.4494901017043942 >5k 5.292016856104753E-4 0.8146253061496719 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCGAAGAAGCTCGTATGCCGTCTTCTGCT 7510 0.2808937282901127 Illumina PCR Primer Index 8 (95% over 24bp) GCTGTCTCTTATACACATCTGACGCGAAGAAGCTCGTATGCCGTCTTCTGC 6534 0.2443887644004789 RNA PCR Primer, Index 40 (95% over 24bp) CCTGTCTCTTATACACATCTGACGCGAAGAAGCTCGTATGCCGTCTTCTGC 5311 0.1986453516576283 Illumina PCR Primer Index 8 (95% over 23bp) TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 3332 0.12462555295108596 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.740262693610023E-5 0.0 0.0 0.30011867853526825 0.0 2 3.740262693610023E-5 0.0 0.0 0.9306147607971098 0.0 3 3.740262693610023E-5 0.0 0.0 1.3233049409992261 0.0 4 3.740262693610023E-5 0.0 0.0 1.8507193834251754 0.0 5 3.740262693610023E-5 0.0 0.0 3.1407359864512725 0.0 6 3.740262693610023E-5 0.0 0.0 4.09659752043025 0.0 7 3.740262693610023E-5 0.0 0.0 4.887251651232472 0.0 8 3.740262693610023E-5 0.0 0.0 6.339782668295925 0.0 9 3.740262693610023E-5 0.0 0.0 6.840828258731924 0.0 10 3.740262693610023E-5 0.0 0.0 7.9236343085320255 0.0 11 3.740262693610023E-5 0.0 0.0 9.619319803307066 0.0 12 3.740262693610023E-5 0.0 0.0 10.994389979985854 0.0 13 3.740262693610023E-5 0.0 0.0 11.521467798769379 0.0 14 3.740262693610023E-5 0.0 0.0 11.746818626059383 0.0 15 7.480525387220046E-5 0.0 0.0 12.210162368543791 0.0 16 7.480525387220046E-5 0.0 0.0 13.108648272802792 0.0 17 7.480525387220046E-5 0.0 0.0 14.14948857518059 0.0 18 7.480525387220046E-5 0.0 0.0 15.24497411551203 0.0 19 7.480525387220046E-5 0.0 0.0 15.962244292265623 0.0 20 1.496105077444009E-4 0.0 0.0 16.614433898150402 0.0 21 1.496105077444009E-4 0.0 0.0 17.3592698109559 0.0 22 1.496105077444009E-4 0.0 0.0 18.155983167321775 0.0 23 1.8701313468050116E-4 0.0 0.0 18.90152973003906 0.0 24 1.8701313468050116E-4 0.0 0.0 19.542161924200585 0.0 25 1.8701313468050116E-4 0.0 0.0 20.139294863235424 0.0 26 2.2441576161660138E-4 0.0 0.0 20.64583863983103 0.0 27 2.2441576161660138E-4 0.0 0.0 21.150699298214512 0.0 28 2.2441576161660138E-4 0.0 0.0 21.658664374633688 0.0 29 2.2441576161660138E-4 0.0 0.0 22.216636763266433 0.0 30 2.2441576161660138E-4 0.0 0.0 22.806625800556475 0.0 31 2.2441576161660138E-4 0.0 0.0 23.349001293756867 0.0 32 2.2441576161660138E-4 0.0 0.0 23.97601893171365 0.0 33 2.2441576161660138E-4 0.0 0.0 24.59922150172295 0.0 34 2.2441576161660138E-4 0.0 0.0 25.22840849204203 0.0 35 2.2441576161660138E-4 0.0 0.0 25.874426664482353 0.0 36 2.2441576161660138E-4 0.0 0.0 26.49740481873004 0.0 37 2.2441576161660138E-4 0.0 0.0 27.108937769135277 0.0 38 2.2441576161660138E-4 0.0 0.0 27.73128007872505 0.0 39 2.2441576161660138E-4 0.0 0.0 28.371800065005765 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCGAA 220 0.0 39.88636 31 TAGTACG 175 0.0 39.857143 1 TTATGCG 115 0.0 39.130436 1 TATAGCG 115 0.0 39.130436 1 ACCGGTA 75 0.0 39.0 41 GCGATAT 145 0.0 38.793102 9 CCCTCGT 680 0.0 38.713234 14 ACGTCGA 35 6.2513973E-6 38.57143 21 CGTGTAC 690 0.0 38.47826 18 CGTTAGG 340 0.0 38.38235 2 TAAGGGA 1950 0.0 38.307693 4 AGTACGG 485 0.0 38.041233 2 TGTTACG 160 0.0 37.968754 1 CGTAAGG 470 0.0 37.81915 2 CGAACTA 30 1.14032686E-4 37.500004 6 AAGGGCG 1445 0.0 37.370243 5 TATTGCG 190 0.0 36.710526 1 TATGGGA 1545 0.0 36.69903 4 TACGGGA 1215 0.0 36.48148 4 ACGGGTA 395 0.0 36.455696 5 >>END_MODULE