##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935083.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 544383 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.87024209058696 33.0 31.0 34.0 30.0 34.0 2 32.181199633346374 34.0 31.0 34.0 30.0 34.0 3 32.2516169682007 34.0 31.0 34.0 30.0 34.0 4 35.81747593146737 37.0 35.0 37.0 35.0 37.0 5 30.29819263276039 37.0 35.0 37.0 0.0 37.0 6 32.78068749391513 37.0 35.0 37.0 17.0 37.0 7 34.96205979981006 37.0 35.0 37.0 32.0 37.0 8 35.4850959710351 37.0 35.0 37.0 33.0 37.0 9 37.313453946945444 39.0 37.0 39.0 34.0 39.0 10 37.31379745510055 39.0 37.0 39.0 34.0 39.0 11 37.21245887546084 39.0 37.0 39.0 34.0 39.0 12 37.03556687111831 39.0 37.0 39.0 33.0 39.0 13 36.896080516842005 39.0 35.0 39.0 33.0 39.0 14 37.9664923408703 40.0 37.0 41.0 33.0 41.0 15 38.094257168206944 40.0 37.0 41.0 33.0 41.0 16 38.220616734909065 40.0 37.0 41.0 34.0 41.0 17 38.19944597829102 40.0 37.0 41.0 34.0 41.0 18 38.14242178760174 40.0 37.0 41.0 34.0 41.0 19 38.11099538376474 40.0 36.0 41.0 34.0 41.0 20 38.00327710453853 40.0 36.0 41.0 34.0 41.0 21 37.947720630511974 40.0 36.0 41.0 34.0 41.0 22 37.9382089448054 40.0 36.0 41.0 34.0 41.0 23 37.833367316760445 40.0 36.0 41.0 33.0 41.0 24 37.810809668927945 40.0 35.0 41.0 33.0 41.0 25 37.75154808287547 39.0 35.0 41.0 33.0 41.0 26 37.70515611251637 39.0 35.0 41.0 33.0 41.0 27 37.655773600571656 39.0 35.0 41.0 33.0 41.0 28 37.623812646610936 39.0 35.0 41.0 33.0 41.0 29 37.59384844861063 39.0 35.0 41.0 33.0 41.0 30 37.47193795544681 39.0 35.0 41.0 33.0 41.0 31 32.89935945832254 38.0 33.0 40.0 9.0 41.0 32 33.67818245610168 38.0 33.0 40.0 16.0 41.0 33 35.62645416921542 38.0 34.0 40.0 28.0 41.0 34 36.50241098638275 38.0 35.0 40.0 31.0 41.0 35 36.56310171331581 39.0 35.0 40.0 31.0 41.0 36 36.75614962260026 39.0 35.0 40.0 31.0 41.0 37 36.83252232343773 39.0 35.0 41.0 32.0 41.0 38 36.76566865607486 39.0 35.0 41.0 31.0 41.0 39 36.83525753008452 39.0 35.0 41.0 32.0 41.0 40 36.794850316780646 39.0 35.0 41.0 31.0 41.0 41 36.685322649678625 39.0 35.0 41.0 31.0 41.0 42 36.59999118267837 39.0 35.0 41.0 31.0 41.0 43 36.61829079894119 39.0 35.0 41.0 31.0 41.0 44 36.58377649559226 39.0 35.0 41.0 31.0 41.0 45 36.56923709961553 39.0 35.0 41.0 31.0 41.0 46 36.51078744192967 39.0 35.0 41.0 31.0 41.0 47 36.380700719897575 39.0 35.0 40.0 31.0 41.0 48 36.3771315415801 39.0 35.0 40.0 31.0 41.0 49 36.40891798605026 39.0 35.0 40.0 31.0 41.0 50 36.23219130648826 39.0 35.0 40.0 31.0 41.0 51 35.625104016841085 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 3.0 11 2.0 12 5.0 13 4.0 14 8.0 15 21.0 16 38.0 17 79.0 18 143.0 19 282.0 20 468.0 21 864.0 22 1426.0 23 2132.0 24 2884.0 25 3471.0 26 3762.0 27 4389.0 28 5185.0 29 6358.0 30 8731.0 31 12252.0 32 19459.0 33 22041.0 34 39197.0 35 59717.0 36 62757.0 37 60795.0 38 95703.0 39 132115.0 40 88.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.854387444134 22.41620329804568 23.704450726786106 11.024958531034217 2 30.062290703420203 26.572835669005094 24.61906415152567 18.745809476049033 3 29.267078509064394 26.289946600095888 27.34618825349065 17.096786637349073 4 27.421319181532123 27.172597233932727 26.51956435083388 18.886519233701275 5 21.313303317700957 39.660863766870015 21.387515774739477 17.63831714068955 6 25.64573103862538 33.40185127015355 24.17948392951286 16.77293376170821 7 73.57779357547903 7.936507936507936 11.876381150770689 6.609317337242346 8 72.2416019603845 8.039744077239737 11.247963290550954 8.4706906718248 9 65.64955187799765 9.08239235979081 14.528006936293014 10.740048825918517 10 38.26368567717949 25.194945470376556 20.059406704470934 16.481962147973025 11 28.287804725717002 25.76256055020087 25.226908261279284 20.722726462802843 12 26.158054164071988 21.011677440331532 31.65400095153596 21.176267444060525 13 23.072542676755152 26.132888058591103 32.554469922830066 18.24009934182368 14 17.368837748423445 32.02910450914154 28.600268560921265 22.00178918151375 15 14.82099918623469 26.406776111671377 38.41358014486125 20.358644557232683 16 16.495922907217896 26.2590859743967 33.281531568766844 23.96345954961856 17 16.626345789637075 26.62133093796096 27.660672724901403 29.091650547500564 18 17.565023154653982 26.739997391542353 31.65565419934127 24.03932525446239 19 19.580148535130597 27.880187294606923 28.31995121082032 24.21971295944216 20 22.17189001126045 28.04220557952765 28.70736227986546 21.078542129346435 21 19.91759478161515 29.129858941223368 30.133564053249273 20.818982223912208 22 18.47063556356462 26.086964508443504 27.54347582492473 27.89892410306714 23 17.672667956199955 28.718751320302065 27.787605417509365 25.820975305988615 24 21.15587738779499 24.34260437963713 29.35139414713538 25.150124085432502 25 17.17008062338464 29.236768965966974 27.555967030564876 26.037183380083505 26 17.06335429284162 28.13644070443052 30.75904280625956 24.041162196468296 27 21.233212646243548 28.700381900243027 27.34949474910128 22.71691070441215 28 16.884436141466576 26.55758905035609 30.17618110778625 26.381793700391086 29 18.39036119790662 25.55186330212369 30.009937856251938 26.047837643717752 30 22.608898514465 26.53370880427934 26.36673077594267 24.490661905312987 31 25.08564742102527 27.990403814961155 21.831688351767045 25.092260412246524 32 21.011677440331532 30.83178570969336 24.29649713528894 23.860039714686167 33 21.66085274521798 26.296008508715374 25.21147794842969 26.831660797636957 34 20.78720312721007 24.516930175997416 27.779890261084567 26.91597643570795 35 20.36654340785807 27.976994138318055 26.67239792572509 24.984064528098784 36 22.191728984924218 24.287496119460013 29.366457071583792 24.154317824031978 37 22.430347751491137 25.965726336053844 29.947114439650026 21.656811472804993 38 18.928401511435883 29.8692280985997 24.192709911955372 27.00966047800905 39 22.19246376172658 25.336022616429975 28.0335719520999 24.437941669743545 40 23.784357704042925 23.330265640183473 29.12269486740034 23.76268178837326 41 20.979898343629394 25.20504865140903 26.87684957098219 26.938203433979385 42 21.276013394981106 22.85192594184609 31.23499447998927 24.63706618318353 43 23.116812979097435 21.990032752675965 30.178201743992737 24.71495252423386 44 20.77305867376461 23.38463912355823 27.343249146281202 28.499053056395958 45 20.51570309873747 23.36626970349919 26.907342808280198 29.210684389483138 46 24.226142256462822 23.769478473795104 27.583521160653433 24.420858109088638 47 19.56453452808041 23.000718244324307 32.8961411359282 24.53860609166708 48 19.17565390543055 22.575466169957547 31.106041151174818 27.142838773437084 49 20.709316786159746 20.38564760471947 34.17079519382494 24.73424041529585 50 20.236120525438892 20.310516676678 32.34965088917178 27.103711908711333 51 19.303137680640283 19.631031828694137 28.10208988892012 32.963740601745464 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1262.0 1 1258.5 2 1255.0 3 1324.0 4 1393.0 5 1233.0 6 1073.0 7 1101.0 8 1129.0 9 1258.5 10 1388.0 11 1558.0 12 1728.0 13 1898.0 14 2068.0 15 2024.5 16 1981.0 17 2070.5 18 2160.0 19 2086.0 20 2012.0 21 2126.5 22 2241.0 23 2346.0 24 2451.0 25 2520.5 26 3023.5 27 3457.0 28 4171.0 29 4885.0 30 5617.5 31 6350.0 32 6847.0 33 7344.0 34 8601.0 35 9858.0 36 10508.5 37 11159.0 38 12809.0 39 14459.0 40 17354.5 41 20250.0 42 25700.0 43 31150.0 44 37046.0 45 42942.0 46 55007.0 47 67072.0 48 70904.5 49 74737.0 50 72056.0 51 69375.0 52 56514.0 53 43653.0 54 36669.0 55 29685.0 56 25279.5 57 20874.0 58 17879.5 59 14885.0 60 14251.5 61 13618.0 62 12715.5 63 11813.0 64 10219.0 65 8625.0 66 7054.5 67 5484.0 68 4357.5 69 3231.0 70 2592.5 71 1954.0 72 1677.5 73 1401.0 74 989.0 75 508.5 76 440.0 77 362.5 78 285.0 79 167.5 80 50.0 81 44.0 82 38.0 83 19.5 84 1.0 85 0.5 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 544383.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.800180019861582 #Duplication Level Percentage of deduplicated Percentage of total 1 69.21291812694768 20.625574198829817 2 12.741942491013859 7.59424360069873 3 5.735185270936757 5.127286605635219 4 2.9572555687221835 3.525069932506369 5 1.7512458499936157 2.6093720794422626 6 1.1844822612210726 2.1178670768832406 7 0.785508368429509 1.6385803550414988 8 0.592821529009253 1.413295062730027 9 0.42741149704679404 1.14632455990977 >10 3.5506774760920226 25.07167467009881 >50 0.94810076556145 18.504729270747212 >100 0.09769162817868166 4.979875588497917 >500 0.008433809626936547 1.6709192684121792 >1k 0.0063253572202024095 3.9751877305669536 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTGC 4158 0.7638004860548547 No Hit CCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTGC 3136 0.576065013051473 No Hit CTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTGCT 3016 0.5540217089806257 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCG 2019 0.37087859099200376 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGC 1966 0.36114279836071295 No Hit GAATCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTC 1381 0.25368169101533294 No Hit TCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTGC 1177 0.21620807409489273 No Hit ACTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTGC 1120 0.20573750466124033 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1007 0.1849800599945259 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCC 857 0.15742592990596693 No Hit TGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTGCTT 857 0.15742592990596693 Illumina Single End Adapter 1 (95% over 21bp) GCCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTG 786 0.14438364166404904 No Hit AGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGC 674 0.12380989119792499 No Hit ACCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTG 666 0.12234033759320184 No Hit AAAACTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTC 658 0.1208707839884787 No Hit GGCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTG 653 0.11995231298552672 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGCACGATT 611 0.11223715656073022 No Hit CGCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTG 600 0.1102165203542359 No Hit AGCTGTCTCTTATACACATCTGACGCTGCACGATTCGTATGCCGTCTTCTG 572 0.1050730827377049 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.5859844998833542 0.0 2 0.0 0.0 0.0 2.4587468749024124 0.0 3 0.0 0.0 0.0 3.4108339165624204 0.0 4 0.0 0.0 0.0 4.467810346759542 0.0 5 0.0 0.0 0.0 7.452841106353431 0.0 6 1.8369420059039315E-4 0.0 0.0 9.186546971525562 0.0 7 1.8369420059039315E-4 0.0 0.0 10.777706137039548 0.0 8 1.8369420059039315E-4 0.0 0.0 13.538997360314337 0.0 9 1.8369420059039315E-4 0.0 0.0 14.507984268428661 0.0 10 1.8369420059039315E-4 0.0 0.0 16.87984378645182 0.0 11 1.8369420059039315E-4 0.0 0.0 19.741799431650144 0.0 12 1.8369420059039315E-4 0.0 0.0 22.38809808535535 0.0 13 1.8369420059039315E-4 0.0 0.0 23.349553531245466 0.0 14 1.8369420059039315E-4 0.0 0.0 23.746333004520714 0.0 15 1.8369420059039315E-4 0.0 0.0 24.495621648728928 0.0 16 1.8369420059039315E-4 0.0 0.0 25.88324763998876 0.0 17 1.8369420059039315E-4 0.0 0.0 27.54825187414008 0.0 18 1.8369420059039315E-4 0.0 0.0 29.77131908968502 0.0 19 1.8369420059039315E-4 0.0 0.0 31.029256975328032 0.0 20 3.673884011807863E-4 0.0 0.0 31.983180958993945 0.0 21 3.673884011807863E-4 0.0 0.0 33.00488810267771 0.0 22 3.673884011807863E-4 0.0 0.0 33.95513820233182 0.0 23 3.673884011807863E-4 0.0 0.0 34.85670933882946 0.0 24 3.673884011807863E-4 0.0 0.0 35.57256563853023 0.0 25 3.673884011807863E-4 0.0 0.0 36.234599537458 0.0 26 3.673884011807863E-4 0.0 0.0 36.80699066649767 0.0 27 3.673884011807863E-4 0.0 0.0 37.360644987077116 0.0 28 3.673884011807863E-4 0.0 0.0 37.900522242612276 0.0 29 3.673884011807863E-4 0.0 0.0 38.517734756596 0.0 30 3.673884011807863E-4 0.0 0.0 39.199791323388126 0.0 31 3.673884011807863E-4 0.0 0.0 39.768324874215395 0.0 32 3.673884011807863E-4 0.0 0.0 40.40592744446465 0.0 33 3.673884011807863E-4 0.0 0.0 40.98750328353383 0.0 34 3.673884011807863E-4 0.0 0.0 41.577529055830176 0.0 35 3.673884011807863E-4 0.0 0.0 42.20190564363693 0.0 36 3.673884011807863E-4 0.0 0.0 42.772459830670684 0.0 37 3.673884011807863E-4 0.0 0.0 43.342462935102674 0.0 38 3.673884011807863E-4 0.0 0.0 43.94700054924566 0.0 39 3.673884011807863E-4 0.0 0.0 44.57468363266303 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTAGCG 40 6.8030204E-9 45.000004 1 AACGTCC 20 7.0300093E-4 45.000004 21 TACCCGA 20 7.0300093E-4 45.000004 15 ACCGGCC 20 7.0300093E-4 45.000004 34 ACGCCTA 20 7.0300093E-4 45.000004 39 CGTATTA 20 7.0300093E-4 45.000004 26 CATATCG 20 7.0300093E-4 45.000004 24 GTTTCGA 20 7.0300093E-4 45.000004 33 CCCTAAG 20 7.0300093E-4 45.000004 4 CCGGCTA 20 7.0300093E-4 45.000004 21 ATTACGA 20 7.0300093E-4 45.000004 18 GGTCCGT 20 7.0300093E-4 45.000004 8 TCGGGTA 20 7.0300093E-4 45.000004 6 TAAACGC 20 7.0300093E-4 45.000004 44 TGTATCG 20 7.0300093E-4 45.000004 1 TACGGGT 40 6.8030204E-9 45.000004 4 CCGCTAT 20 7.0300093E-4 45.000004 39 ATCGTCG 20 7.0300093E-4 45.000004 1 CATTACG 20 7.0300093E-4 45.000004 17 TTCCCTA 20 7.0300093E-4 45.000004 17 >>END_MODULE