##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935082.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2055439 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.868651417045214 33.0 31.0 34.0 30.0 34.0 2 32.201262114808564 34.0 31.0 34.0 30.0 34.0 3 32.25749584395353 34.0 31.0 34.0 30.0 34.0 4 35.8084540577463 37.0 35.0 37.0 35.0 37.0 5 30.301743325878316 37.0 35.0 37.0 0.0 37.0 6 32.77563722397016 37.0 35.0 37.0 17.0 37.0 7 35.0284182600408 37.0 35.0 37.0 32.0 37.0 8 35.62369547332711 37.0 35.0 37.0 35.0 37.0 9 37.52379029491997 39.0 37.0 39.0 35.0 39.0 10 37.25972213235226 39.0 37.0 39.0 34.0 39.0 11 37.18071954458391 39.0 37.0 39.0 34.0 39.0 12 37.176889219286004 39.0 37.0 39.0 34.0 39.0 13 37.20886827582818 39.0 37.0 39.0 34.0 39.0 14 38.386383152212254 40.0 38.0 41.0 34.0 41.0 15 38.46998037888743 40.0 38.0 41.0 34.0 41.0 16 38.5207836379479 40.0 38.0 41.0 34.0 41.0 17 38.52051654172175 40.0 38.0 41.0 34.0 41.0 18 38.472270400629746 40.0 38.0 41.0 34.0 41.0 19 38.450763559512104 40.0 38.0 41.0 34.0 41.0 20 38.39223251091373 40.0 38.0 41.0 34.0 41.0 21 38.34830904736166 40.0 38.0 41.0 34.0 41.0 22 38.34854160108863 40.0 37.0 41.0 34.0 41.0 23 38.279441520765154 40.0 37.0 41.0 34.0 41.0 24 38.27150890880245 40.0 37.0 41.0 34.0 41.0 25 38.22653943999311 40.0 37.0 41.0 34.0 41.0 26 38.172019213413776 40.0 37.0 41.0 34.0 41.0 27 38.15327869131607 40.0 37.0 41.0 34.0 41.0 28 38.13628329519874 40.0 37.0 41.0 34.0 41.0 29 38.14407968322096 40.0 37.0 41.0 34.0 41.0 30 38.0149121428561 40.0 37.0 41.0 34.0 41.0 31 33.39665930246531 39.0 34.0 41.0 9.0 41.0 32 34.32411129690543 39.0 34.0 41.0 16.0 41.0 33 36.28003798701883 39.0 34.0 41.0 30.0 41.0 34 37.13966359497898 39.0 35.0 41.0 32.0 41.0 35 37.31678147587936 39.0 36.0 41.0 33.0 41.0 36 37.48891696615662 39.0 36.0 41.0 33.0 41.0 37 37.58969057218434 40.0 37.0 41.0 33.0 41.0 38 37.60398143656902 40.0 37.0 41.0 33.0 41.0 39 37.60069016886417 40.0 37.0 41.0 33.0 41.0 40 37.595921844433235 40.0 37.0 41.0 33.0 41.0 41 37.54343086805301 40.0 36.0 41.0 33.0 41.0 42 37.49171442207723 40.0 36.0 41.0 33.0 41.0 43 37.52145502736885 40.0 36.0 41.0 33.0 41.0 44 37.476956990696394 40.0 36.0 41.0 33.0 41.0 45 37.471775129303275 40.0 36.0 41.0 33.0 41.0 46 37.42616978660033 40.0 36.0 41.0 33.0 41.0 47 37.33123970110521 39.0 36.0 41.0 33.0 41.0 48 37.35141835880316 39.0 36.0 41.0 33.0 41.0 49 37.35780190995695 39.0 36.0 41.0 33.0 41.0 50 37.19442124042601 39.0 36.0 41.0 32.0 41.0 51 36.57383945716706 39.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 5.0 10 10.0 11 12.0 12 15.0 13 20.0 14 31.0 15 42.0 16 88.0 17 138.0 18 315.0 19 528.0 20 913.0 21 1625.0 22 2592.0 23 4181.0 24 6214.0 25 8261.0 26 10062.0 27 12537.0 28 15768.0 29 20331.0 30 27537.0 31 38708.0 32 57336.0 33 72889.0 34 120396.0 35 178808.0 36 249520.0 37 241171.0 38 393393.0 39 591600.0 40 391.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.22371863139699 22.08963632586518 26.594707991820727 11.091937050917103 2 32.63259089664057 23.559979157737107 25.676218073122094 18.13121187250023 3 31.782164296775527 23.610382015715377 27.761271436418205 16.846182251090884 4 27.637404953394384 26.625407029836452 27.180470935892526 18.556717080876638 5 21.602051921754914 39.3675998168761 22.115956737222557 16.914391524146424 6 25.578477395826386 33.56733038538239 25.05600993267132 15.7981822861199 7 79.19398240473203 5.65747755102438 9.447714089301604 5.700825954941986 8 79.18790097881767 4.539224953890629 9.395608432067311 6.877265635224397 9 73.569928370533 6.855177896303418 12.161051726662771 7.413842006500801 10 35.70964645508818 26.160640135756886 22.081706146472847 16.048007262682084 11 25.097217674667068 26.532385539050296 27.274562757639607 21.09583402864303 12 21.1462368866213 23.068453989634328 33.134089603242906 22.65121952050146 13 22.39993500171983 24.41624392647994 34.58862072773748 18.595200344062754 14 19.918956485694782 28.123529815285202 30.743651356230956 21.213862342789056 15 18.389064331269378 27.625679964231487 33.9442814892585 20.040974215240638 16 20.007793955451852 28.43207704047651 30.1730189998341 21.387110004237538 17 19.971791914038803 27.579947641355446 28.43806116357625 24.010199281029504 18 20.301356547190164 26.71604460166417 31.694835020645222 21.28776383050044 19 19.796695499112353 28.916061240445472 29.701440908730447 21.585802351711727 20 20.5796912484389 29.173135276697582 29.761817305208275 20.48535616965524 21 20.071770556070987 29.06717251156565 31.002817402997607 19.858239529365747 22 19.054956143188875 26.940960057681107 28.548207949737257 25.455875849392758 23 18.311903199267892 28.207842704161983 29.3559672653871 24.124286831183024 24 20.583583361024093 26.32693064595933 29.491072223500677 23.598413769515904 25 18.74952260806572 28.370289753186544 27.610889936407744 25.269297702339987 26 17.670045182561974 28.024426898584682 29.92494547393525 24.38058244491809 27 19.798641555404952 27.14203632411373 30.33308212990023 22.72623999058109 28 17.650244059784796 25.946427989349235 31.59393200187405 24.80939594899192 29 20.144212501562926 23.965829197558282 29.63313433286028 26.256823968018512 30 21.942027956071673 24.90032542926353 30.122713444670456 23.034933169994343 31 22.279620071429996 27.375709033447354 27.755335964725784 22.589334930396866 32 21.01361315028079 26.096177021064598 27.85687145179205 25.033338376862556 33 21.79704676227317 25.556827519571247 29.34103128334142 23.30509443481417 34 19.50809535092017 23.94753626840787 31.513900436840984 25.030467943830974 35 20.19729118694352 23.81106907088948 28.72670996317575 27.264929778991252 36 20.9048286035246 25.868245177794137 30.4154003110771 22.811525907604167 37 18.75827986138241 25.466871067445933 34.14832549153733 21.626523579634327 38 21.327901241535262 26.117437686061223 28.57019838584361 23.9844626865599 39 24.065661885368527 24.784097217188155 29.152409777181422 21.9978311202619 40 22.29080989511243 22.807633795018972 30.795465105021357 24.10609120484724 41 17.972219073395028 24.564679370197805 29.25851849653529 28.20458305987188 42 19.54969230417444 24.519141652951024 30.304815662250256 25.626350380624284 43 21.3853585535742 23.716150175218043 31.13388429430404 23.764606976903718 44 20.96141019023187 23.517068616485336 29.56005991907325 25.961461274209547 45 22.222406016427634 21.10814283469371 29.553978493158883 27.115472655719774 46 23.691581214524003 22.07294889315616 30.35570503430167 23.879764858018167 47 18.48563737478952 23.25994592882591 33.284179194809475 24.97023750157509 48 18.742662759634314 22.34632115085877 32.30365873178431 26.60735735772261 49 21.684272800117153 20.918596951794726 33.319256859483545 24.077873388604576 50 20.926381176965116 20.116967713466565 32.61288707667802 26.3437640328903 51 19.862277596172888 19.59566788408705 29.670352659456206 30.871701860283864 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1427.0 1 1688.0 2 1949.0 3 2492.0 4 3035.0 5 2672.5 6 2310.0 7 2441.5 8 2573.0 9 2824.0 10 3075.0 11 3411.5 12 3748.0 13 3982.0 14 4216.0 15 4226.0 16 4236.0 17 4504.0 18 4772.0 19 4839.0 20 4906.0 21 5578.0 22 6250.0 23 6817.0 24 7384.0 25 8982.0 26 13030.0 27 15480.0 28 18323.5 29 21167.0 30 25215.0 31 29263.0 32 33122.0 33 36981.0 34 43766.0 35 50551.0 36 55301.5 37 60052.0 38 67630.5 39 75209.0 40 83726.5 41 92244.0 42 108077.5 43 123911.0 44 145090.5 45 166270.0 46 201274.5 47 236279.0 48 267969.5 49 299660.0 50 285660.5 51 271661.0 52 226363.5 53 181066.0 54 149941.0 55 118816.0 56 96667.0 57 74518.0 58 62504.0 59 50490.0 60 43593.0 61 36696.0 62 29309.5 63 21923.0 64 17922.5 65 13922.0 66 11103.5 67 8285.0 68 6639.0 69 4993.0 70 3878.5 71 2764.0 72 2054.5 73 1345.0 74 1000.5 75 536.5 76 417.0 77 316.5 78 216.0 79 159.5 80 103.0 81 63.5 82 24.0 83 19.5 84 15.0 85 7.5 86 0.0 87 0.5 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2055439.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.16497297507067 #Duplication Level Percentage of deduplicated Percentage of total 1 62.81989381397032 17.693206115672833 2 14.946271328954753 8.419226561161684 3 6.876731951510477 5.810489087132926 4 3.8002184360693523 4.281321982050345 5 2.295733473714524 3.232963562256734 6 1.4600703933755939 2.467370590267464 7 1.0329571061946807 2.0365246286266268 8 0.7422393838340884 1.6724121749376164 9 0.5691724385498307 1.4427653714919948 >10 4.607894923952687 29.813223844951242 >50 0.7484457413122272 13.599555605054306 >100 0.08799138592607823 4.416516154934045 >500 0.008380052245517649 1.5820041333336377 >1k 0.0034282031913481286 1.8678613158419435 >5k 3.8091146570534766E-4 1.0527740784214692 >10k+ 1.9045573285267383E-4 0.6117847938651206 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGCT 11405 0.5548693004268188 No Hit GCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC 9913 0.4822814007129377 No Hit CCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC 9713 0.472551119249951 No Hit TCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC 4402 0.21416349500033816 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCC 3516 0.17105834811930687 No Hit ACTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC 3070 0.14935982045684645 No Hit TGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGCTT 2305 0.11214149386092216 Illumina Single End Adapter 2 (95% over 21bp) ACCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTG 2212 0.10761691298063333 No Hit GCCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTG 2082 0.10129223002969195 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.4325703657466848E-4 0.0 0.0 0.5809464547476233 0.0 2 2.4325703657466848E-4 0.0 0.0 1.9652735984867467 0.0 3 2.4325703657466848E-4 0.0 0.0 2.7834929667093014 0.0 4 2.4325703657466848E-4 0.0 0.0 3.7710192323878258 0.0 5 2.4325703657466848E-4 0.0 0.0 6.053451355160625 0.0 6 2.4325703657466848E-4 0.0 0.0 7.656466574780375 0.0 7 2.4325703657466848E-4 0.0 0.0 9.015689592344993 0.0 8 2.4325703657466848E-4 0.0 0.0 11.402576286622955 0.0 9 2.4325703657466848E-4 0.0 0.0 12.185231476098293 0.0 10 2.4325703657466848E-4 0.0 0.0 13.938044378840724 0.0 11 2.4325703657466848E-4 0.0 0.0 16.7162343421527 0.0 12 2.4325703657466848E-4 0.0 0.0 18.89970950244692 0.0 13 2.4325703657466848E-4 0.0 0.0 19.77704033055712 0.0 14 2.9190844388960217E-4 0.0 0.0 20.10402643912079 0.0 15 3.8921125851946954E-4 0.0 0.0 20.70662277012356 0.0 16 3.8921125851946954E-4 0.0 0.0 22.053974844303333 0.0 17 3.8921125851946954E-4 0.0 0.0 23.695424675701883 0.0 18 3.8921125851946954E-4 0.0 0.0 25.52758802377497 0.0 19 3.8921125851946954E-4 0.0 0.0 26.67293945478314 0.0 20 3.8921125851946954E-4 0.0 0.0 27.668931065334462 0.0 21 3.8921125851946954E-4 0.0 0.0 28.792973179938688 0.0 22 3.8921125851946954E-4 0.0 0.0 29.98410558523021 0.0 23 3.8921125851946954E-4 0.0 0.0 31.16575096609532 1.9460562925973477E-4 24 3.8921125851946954E-4 0.0 0.0 32.069742765414105 1.9460562925973477E-4 25 3.8921125851946954E-4 0.0 0.0 32.890492006817034 1.9460562925973477E-4 26 3.8921125851946954E-4 0.0 0.0 33.64507533427166 1.9460562925973477E-4 27 4.3786266583440325E-4 0.0 0.0 34.37411667288594 1.9460562925973477E-4 28 4.3786266583440325E-4 0.0 0.0 35.137700510693826 1.9460562925973477E-4 29 4.8651407314933697E-4 0.0 0.0 35.90610083782588 1.9460562925973477E-4 30 4.8651407314933697E-4 0.0 0.0 36.695178013066794 1.9460562925973477E-4 31 4.8651407314933697E-4 0.0 0.0 37.45112357992623 1.9460562925973477E-4 32 4.8651407314933697E-4 0.0 0.0 38.30918845073972 1.9460562925973477E-4 33 4.8651407314933697E-4 0.0 0.0 39.14594400514927 1.9460562925973477E-4 34 5.351654804642707E-4 0.0 0.0 39.92675044114664 1.9460562925973477E-4 35 5.351654804642707E-4 0.0 0.0 40.718503443789864 1.9460562925973477E-4 36 5.351654804642707E-4 0.0 0.0 41.480627739378306 1.9460562925973477E-4 37 5.351654804642707E-4 0.0 0.0 42.255839263534455 1.9460562925973477E-4 38 5.351654804642707E-4 0.0 0.0 43.03528346012701 1.9460562925973477E-4 39 5.351654804642707E-4 0.0 0.0 43.80796511110279 1.9460562925973477E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACCGA 20 7.0345844E-4 45.000004 11 TTAGCCG 30 2.16634E-6 45.000004 1 CCGTTGT 20 7.0345844E-4 45.000004 29 TACCGGA 20 7.0345844E-4 45.000004 3 GGCGTAA 45 3.8562575E-10 45.0 8 GTACGAC 25 3.8918835E-5 45.0 9 TAGTACG 80 0.0 42.187504 1 CTAACGG 165 0.0 40.909092 2 CGGTTGT 240 0.0 40.312504 11 ACGCCTA 365 0.0 39.452053 25 TAGAACG 80 0.0 39.375004 1 TCATGCG 80 0.0 39.375004 1 TACACGG 120 0.0 39.375004 2 TCGCGCG 40 3.4599907E-7 39.375004 1 GCGCGAG 110 0.0 38.863636 1 TATACGC 255 0.0 38.82353 26 AACGTCG 35 6.250695E-6 38.571426 1 TTATCCG 35 6.250695E-6 38.571426 19 ATACGCA 275 0.0 38.454544 27 CTAACGC 205 0.0 38.414635 29 >>END_MODULE