##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935079.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1910575 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.071373277678184 33.0 31.0 34.0 30.0 34.0 2 32.39712547269801 34.0 31.0 34.0 30.0 34.0 3 32.45136621174254 34.0 31.0 34.0 30.0 34.0 4 35.957538960784056 37.0 35.0 37.0 35.0 37.0 5 30.380097614592465 37.0 35.0 37.0 0.0 37.0 6 32.88502361854415 37.0 35.0 37.0 17.0 37.0 7 35.11972887743219 37.0 35.0 37.0 32.0 37.0 8 35.693777527707624 37.0 35.0 37.0 35.0 37.0 9 37.60269500019628 39.0 37.0 39.0 35.0 39.0 10 37.47183805922301 39.0 37.0 39.0 35.0 39.0 11 37.35856378315429 39.0 37.0 39.0 35.0 39.0 12 37.25529016133886 39.0 37.0 39.0 34.0 39.0 13 37.25771560917525 39.0 37.0 39.0 34.0 39.0 14 38.49295840257514 40.0 38.0 41.0 34.0 41.0 15 38.5745307041074 40.0 38.0 41.0 35.0 41.0 16 38.63389398479515 40.0 38.0 41.0 35.0 41.0 17 38.609045444434265 40.0 38.0 41.0 35.0 41.0 18 38.56325242400848 40.0 38.0 41.0 35.0 41.0 19 38.57757795428078 40.0 38.0 41.0 34.0 41.0 20 38.49504625570836 40.0 38.0 41.0 34.0 41.0 21 38.454567865694884 40.0 38.0 41.0 34.0 41.0 22 38.45439409601821 40.0 38.0 41.0 34.0 41.0 23 38.38858511181189 40.0 37.0 41.0 34.0 41.0 24 38.38925140337333 40.0 37.0 41.0 34.0 41.0 25 38.34207136595004 40.0 37.0 41.0 34.0 41.0 26 38.29037959776507 40.0 37.0 41.0 34.0 41.0 27 38.25732829122123 40.0 37.0 41.0 34.0 41.0 28 38.223088860683305 40.0 37.0 41.0 34.0 41.0 29 38.22465959200764 40.0 37.0 41.0 34.0 41.0 30 38.11673449092551 40.0 37.0 41.0 34.0 41.0 31 33.468953587270846 39.0 34.0 41.0 9.0 41.0 32 34.38563730814022 39.0 34.0 41.0 16.0 41.0 33 36.38002119780694 39.0 34.0 41.0 30.0 41.0 34 37.22923831830732 39.0 35.0 41.0 32.0 41.0 35 37.37201680122476 39.0 36.0 41.0 33.0 41.0 36 37.56559569763029 40.0 36.0 41.0 33.0 41.0 37 37.666832759771275 40.0 36.0 41.0 33.0 41.0 38 37.6317412297345 40.0 36.0 41.0 33.0 41.0 39 37.65311856378315 40.0 36.0 41.0 33.0 41.0 40 37.608009630608585 40.0 36.0 41.0 33.0 41.0 41 37.565662693168285 40.0 36.0 41.0 33.0 41.0 42 37.481560786674166 40.0 36.0 41.0 33.0 41.0 43 37.47888672258352 40.0 36.0 41.0 33.0 41.0 44 37.422168718841185 39.0 35.0 41.0 33.0 41.0 45 37.40543344281172 39.0 35.0 41.0 33.0 41.0 46 37.36404223859309 39.0 35.0 41.0 33.0 41.0 47 37.26584562239117 39.0 35.0 41.0 33.0 41.0 48 37.260643000143936 39.0 35.0 41.0 33.0 41.0 49 37.23898093505882 39.0 35.0 41.0 33.0 41.0 50 37.05119558248171 39.0 35.0 41.0 33.0 41.0 51 36.458137471703544 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 5.0 10 12.0 11 14.0 12 25.0 13 27.0 14 26.0 15 48.0 16 84.0 17 136.0 18 269.0 19 505.0 20 872.0 21 1463.0 22 2355.0 23 3684.0 24 5380.0 25 6869.0 26 8673.0 27 10669.0 28 13067.0 29 17233.0 30 23077.0 31 33534.0 32 52866.0 33 63992.0 34 118716.0 35 173219.0 36 226210.0 37 225119.0 38 343721.0 39 578189.0 40 515.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.1763343496068 21.550789683733953 26.68317129659919 11.58970467006006 2 30.34070894887665 24.89098831503605 26.322337516192768 18.445965219894532 3 31.00930348193607 24.692461693469244 27.101474686939795 17.196760137654895 4 28.353401462910384 25.834212213600615 26.61889745233765 19.193488871151352 5 22.093767583057456 39.37003258181437 21.164832576580352 17.37136725854782 6 26.729597110817426 32.87580963845962 24.0907580178742 16.303835232848748 7 80.12294728026903 5.626473705559844 8.619761066694581 5.630817947476545 8 80.75485128822476 4.6624183819007365 8.451905839864962 6.1308244900095525 9 74.73797155306649 6.898551483192232 11.082056448974784 7.281420514766497 10 39.91463302932363 26.489774020909934 17.86148149117412 15.73411145859231 11 26.8256938356254 26.074611046412727 26.173324784423535 20.926370333538333 12 23.794669144105832 23.381809141227116 31.25017337712469 21.573348337542363 13 22.122188346440208 24.717323318896145 33.02367088441961 20.13681745024404 14 19.70501027177682 27.15439069390105 31.36888109600513 21.771717938316996 15 18.535310050639207 26.152545699593055 34.07487274773302 21.237271502034726 16 20.80891878099525 27.66366146317208 29.679913115161664 21.847506640671003 17 20.814728550305535 26.387134763094878 28.71167057037803 24.086466116221555 18 21.345929890216297 25.567119846119624 31.226567918035148 21.860382345628935 19 21.922039176687647 26.598327728563394 28.475458958690446 23.004174136058516 20 22.791672663988592 27.677112911034634 28.90108998599898 20.630124438977795 21 22.175680096306085 27.22243303717467 30.04106093715243 20.560825929366814 22 21.01932664250291 24.675974510291404 29.175614670976014 25.12908417622967 23 20.04710623765097 26.630831032542556 29.728746581526504 23.593316148279968 24 20.909883150360496 25.27390968687437 30.18536304515656 23.630844117608575 25 19.626761577012157 27.567983460476558 27.87694803920286 24.928306923308426 26 19.144079661881893 27.277233293641967 29.66986378446279 23.908823260013346 27 20.666605603025268 26.620834042107745 29.65013150491344 23.062428849953548 28 18.1584078091674 25.616057993012575 31.26435758868403 24.961176609135993 29 19.40839799536789 23.745835677740995 31.39976185179854 25.446004475092575 30 20.79311202125015 24.729256899101056 31.377307878518245 23.10032320113055 31 23.16642895463408 26.808264527694543 26.941365819190562 23.083940698480824 32 21.117307616816927 26.396608350889128 28.114991560132417 24.37109247216152 33 22.96266830666161 24.718527144969446 28.175601585909998 24.143202962458947 34 20.40019365897701 23.900030095651832 29.741151224107927 25.95862502126323 35 19.530298470355785 25.16567002080525 29.9828062232574 25.321225285581566 36 22.859715007262214 25.15567303037044 30.717611190348453 21.267000772018896 37 20.513143948811223 25.32305719482355 31.162189393245487 23.001609463119742 38 20.900618923622467 27.204846708451647 27.568820904701465 24.32571346322442 39 23.96875286235819 23.554898394462402 27.365478978841452 25.110869764337963 40 22.138675529618045 23.831621370529817 29.690538188765164 24.33916491108698 41 19.93912827290214 25.60370569069521 28.04197689177342 26.415189144629238 42 21.990029179697213 24.158852701411877 29.948889732148697 23.902228386742213 43 22.547767033484682 22.672807924315975 30.83940698480824 23.9400180573911 44 20.9868756787878 22.946233463747827 29.376601284953484 26.690289572510896 45 21.398322494536984 22.010912945055807 29.24119702183898 27.34956753856823 46 23.333394396974732 23.02259790900645 29.31724742551326 24.326760268505552 47 19.212750088324196 23.78409641076639 32.113892414587234 24.889261086322183 48 20.306504586315636 22.962144904021038 31.53919631524541 25.19215419441791 49 22.402522800727528 20.80551666383157 32.409562566243146 24.382397969197754 50 20.598667940279757 21.09506300459286 31.679468222917183 26.6268008322102 51 20.23369927901286 20.816141737435064 29.0997212880939 29.850437695458176 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1405.0 1 1744.0 2 2083.0 3 2914.5 4 3746.0 5 3050.0 6 2354.0 7 2397.0 8 2440.0 9 2768.0 10 3096.0 11 3375.0 12 3654.0 13 3789.5 14 3925.0 15 3900.5 16 3876.0 17 4246.5 18 4617.0 19 4799.5 20 4982.0 21 5409.0 22 5836.0 23 7347.5 24 8859.0 25 9866.0 26 13692.5 27 16512.0 28 19677.0 29 22842.0 30 26755.0 31 30668.0 32 33717.0 33 36766.0 34 42953.0 35 49140.0 36 54874.5 37 60609.0 38 66347.5 39 72086.0 40 78579.5 41 85073.0 42 96257.5 43 107442.0 44 123404.5 45 139367.0 46 162202.0 47 185037.0 48 207659.5 49 230282.0 50 221000.5 51 211719.0 52 179763.5 53 147808.0 54 128062.5 55 108317.0 56 94917.5 57 81518.0 58 75327.0 59 69136.0 60 63400.5 61 57665.0 62 50840.0 63 44015.0 64 38432.5 65 32850.0 66 27821.0 67 22792.0 68 18184.5 69 13577.0 70 11652.0 71 9727.0 72 8250.0 73 6773.0 74 5196.0 75 2743.0 76 1867.0 77 1432.5 78 998.0 79 676.5 80 355.0 81 266.0 82 177.0 83 110.5 84 44.0 85 31.5 86 19.0 87 23.0 88 27.0 89 14.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1910575.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.038527009676052 #Duplication Level Percentage of deduplicated Percentage of total 1 64.59279914355204 16.17308545986408 2 14.257607004001965 7.139789561260994 3 6.384494498353285 4.795750138204407 4 3.4385139440601424 3.4438129704599043 5 2.1462402282277337 2.6869346961866705 6 1.3246153314662037 1.989985005260852 7 0.9413422696945827 1.6498876691568298 8 0.6507778610935835 1.3035615241832719 9 0.5113713601018389 1.1523587050696207 >10 4.075681320112764 24.37426329242875 >50 1.5049818712939513 25.710515877811424 >100 0.16096956315566707 6.098298247428645 >500 0.007070403257558995 1.262831711593673 >1k 0.002828161303023598 1.098309524120628 >5k 7.070403257558995E-4 1.1206156169702732 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTCTGCT 6860 0.35905421142849664 No Hit CCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTCTGC 6146 0.3216832628920613 No Hit GCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTCTGC 5984 0.3132041401148869 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCC 2692 0.1408999908404538 No Hit TCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTCTGC 2431 0.1272391819216728 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3747039503814297 0.0 2 0.0 0.0 0.0 1.273805006346257 0.0 3 0.0 0.0 0.0 1.8367245462753359 0.0 4 0.0 0.0 0.0 2.5564031770540283 0.0 5 0.0 0.0 0.0 4.344451277756696 0.0 6 0.0 0.0 0.0 5.558431362286223 0.0 7 0.0 0.0 0.0 6.684636823992777 0.0 8 0.0 0.0 0.0 8.569043350823705 0.0 9 0.0 0.0 0.0 9.22261622809887 0.0 10 0.0 0.0 0.0 10.593198382685841 0.0 11 0.0 0.0 0.0 12.780288656556273 0.0 12 5.234026405663217E-5 0.0 0.0 14.605707705795377 0.0 13 5.234026405663217E-5 0.0 0.0 15.297436635567827 0.0 14 5.234026405663217E-5 0.0 0.0 15.578032791175431 0.0 15 5.234026405663217E-5 0.0 0.0 16.08840270599165 0.0 16 5.234026405663217E-5 0.0 0.0 17.12955523860618 0.0 17 5.234026405663217E-5 0.0 0.0 18.35421273700326 0.0 18 5.234026405663217E-5 0.0 0.0 19.761537756957985 0.0 19 5.234026405663217E-5 0.0 0.0 20.649595017206863 0.0 20 5.234026405663217E-5 0.0 0.0 21.472802690289573 0.0 21 5.234026405663217E-5 0.0 0.0 22.34955445350222 0.0 22 5.234026405663217E-5 0.0 0.0 23.260013346767334 0.0 23 5.234026405663217E-5 0.0 0.0 24.139329782918754 0.0 24 5.234026405663217E-5 0.0 0.0 24.852518220954426 0.0 25 5.234026405663217E-5 0.0 0.0 25.4919592269343 0.0 26 5.234026405663217E-5 0.0 0.0 26.057495780066212 0.0 27 5.234026405663217E-5 0.0 0.0 26.624079138479253 0.0 28 1.0468052811326434E-4 0.0 0.0 27.22044410714052 0.0 29 1.0468052811326434E-4 0.0 0.0 27.870039124347382 0.0 30 1.0468052811326434E-4 0.0 0.0 28.573858655116915 0.0 31 1.0468052811326434E-4 0.0 0.0 29.183727411904794 0.0 32 1.0468052811326434E-4 0.0 0.0 29.83405519280845 0.0 33 1.0468052811326434E-4 0.0 0.0 30.46622090208445 0.0 34 1.0468052811326434E-4 0.0 0.0 31.084202399801107 0.0 35 1.0468052811326434E-4 0.0 0.0 31.771901129241197 0.0 36 2.0936105622652867E-4 0.0 0.0 32.4304986718658 0.0 37 2.0936105622652867E-4 0.0 0.0 33.043560184761134 0.0 38 2.617013202831608E-4 0.0 0.0 33.69305052143988 0.0 39 2.617013202831608E-4 0.0 0.0 34.37917904295827 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTCGA 25 3.89178E-5 45.0 36 CGCTATA 20 7.034461E-4 45.0 31 TATTACG 35 1.212502E-7 45.0 1 ATCGAGT 25 3.89178E-5 45.0 28 AACGTAC 30 2.16626E-6 44.999996 33 TATAGCG 85 0.0 42.35294 1 GTTTCGC 265 0.0 41.60377 31 ACGTAAG 65 0.0 41.53846 1 CGTTAGG 325 0.0 39.461536 2 ACGGTTT 280 0.0 39.375 28 GCTACGA 180 0.0 38.750004 10 CGATTAC 35 6.250464E-6 38.571426 9 CTATTCG 35 6.250464E-6 38.571426 16 TAGTACG 70 0.0 38.571426 1 AACGCTT 215 0.0 37.67442 31 CACCGTA 30 1.1402051E-4 37.499996 14 TACGTCA 30 1.1402051E-4 37.499996 19 ACGCATC 235 0.0 37.340427 29 TTACGCA 310 0.0 37.01613 29 CGTAAGG 225 0.0 37.000004 2 >>END_MODULE