##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935078.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4372745 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.13818413833873 33.0 31.0 34.0 30.0 34.0 2 32.45737791707497 34.0 31.0 34.0 30.0 34.0 3 32.50930090823956 34.0 31.0 34.0 31.0 34.0 4 35.99417642693548 37.0 35.0 37.0 35.0 37.0 5 30.486159609124247 37.0 35.0 37.0 0.0 37.0 6 32.956388264122424 37.0 35.0 37.0 17.0 37.0 7 35.17663046896172 37.0 35.0 37.0 32.0 37.0 8 35.75495438220157 37.0 35.0 37.0 35.0 37.0 9 37.65663536291277 39.0 38.0 39.0 35.0 39.0 10 37.48979668377644 39.0 37.0 39.0 35.0 39.0 11 37.36245790687543 39.0 37.0 39.0 35.0 39.0 12 37.21871867671223 39.0 37.0 39.0 34.0 39.0 13 37.18724279600114 39.0 37.0 39.0 34.0 39.0 14 38.28573676260564 40.0 38.0 41.0 33.0 41.0 15 38.4267920951256 40.0 38.0 41.0 34.0 41.0 16 38.53944673197271 40.0 38.0 41.0 34.0 41.0 17 38.55506552520213 40.0 38.0 41.0 34.0 41.0 18 38.51058316915347 40.0 38.0 41.0 34.0 41.0 19 38.496346116684144 40.0 38.0 41.0 34.0 41.0 20 38.43214982808282 40.0 38.0 41.0 34.0 41.0 21 38.38494195293803 40.0 37.0 41.0 34.0 41.0 22 38.4129090536951 40.0 37.0 41.0 34.0 41.0 23 38.33569531266973 40.0 37.0 41.0 34.0 41.0 24 38.326378967902315 40.0 37.0 41.0 34.0 41.0 25 38.2564942616137 40.0 37.0 41.0 34.0 41.0 26 38.216026317564825 40.0 37.0 41.0 34.0 41.0 27 38.1678675523041 40.0 37.0 41.0 34.0 41.0 28 38.11832201511865 40.0 37.0 41.0 34.0 41.0 29 38.09959053180554 40.0 37.0 41.0 34.0 41.0 30 37.97015764697004 40.0 36.0 41.0 34.0 41.0 31 33.388915886931436 39.0 34.0 41.0 9.0 41.0 32 34.300965183197285 39.0 34.0 41.0 16.0 41.0 33 36.25570459745538 39.0 34.0 41.0 30.0 41.0 34 37.07820259356537 39.0 35.0 41.0 31.0 41.0 35 37.22167357117783 39.0 35.0 41.0 32.0 41.0 36 37.41294061281872 40.0 36.0 41.0 33.0 41.0 37 37.530222320304524 40.0 36.0 41.0 33.0 41.0 38 37.503195132576906 40.0 36.0 41.0 33.0 41.0 39 37.51529028104772 40.0 36.0 41.0 33.0 41.0 40 37.49154432741905 40.0 35.0 41.0 33.0 41.0 41 37.42436958935406 40.0 35.0 41.0 33.0 41.0 42 37.35227117062623 40.0 35.0 41.0 33.0 41.0 43 37.351119719992816 40.0 35.0 41.0 33.0 41.0 44 37.29598433020906 39.0 35.0 41.0 33.0 41.0 45 37.240794741060824 39.0 35.0 41.0 33.0 41.0 46 37.211492323471866 39.0 35.0 41.0 33.0 41.0 47 37.12399465324413 39.0 35.0 41.0 33.0 41.0 48 37.10953051229834 39.0 35.0 41.0 33.0 41.0 49 37.08988495784684 39.0 35.0 41.0 33.0 41.0 50 36.90554034136452 39.0 35.0 41.0 32.0 41.0 51 36.3002841464572 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 10.0 10 17.0 11 20.0 12 28.0 13 44.0 14 63.0 15 122.0 16 206.0 17 368.0 18 720.0 19 1273.0 20 2079.0 21 3450.0 22 5540.0 23 9024.0 24 13187.0 25 17916.0 26 23152.0 27 28547.0 28 35080.0 29 44881.0 30 59491.0 31 85912.0 32 124675.0 33 155278.0 34 287089.0 35 369641.0 36 496196.0 37 513057.0 38 761761.0 39 1332414.0 40 1501.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.91648495395913 21.32793016743487 25.919233799364015 10.836351079241986 2 31.659632564899166 23.411038146518948 26.44023376620407 18.48909552237782 3 32.23446599332913 24.115446933219292 26.31845671311728 17.331630360334298 4 28.039663872464548 26.13747199985364 26.28344438104669 19.539419746635122 5 22.771074005001434 39.47893142636948 21.001842092324157 16.74815247630493 6 27.941944933903073 33.10483460617987 23.54216859204001 15.411051867877044 7 82.87295508885151 5.411680763456364 7.086807028536994 4.62855711915513 8 84.9751586246168 4.123130893752093 6.642738142745575 4.2589723388855285 9 78.85435807484772 6.590070996593673 8.864180280350215 5.691390648208391 10 40.34632707829979 31.04555605231954 15.100857699225545 13.50725917015513 11 29.526052856958273 24.33935662838789 27.044110735933607 19.090479778720233 12 25.90276816965087 23.37684909593402 30.11561387640944 20.60476885800567 13 25.25672089271156 23.248051281288983 31.925415271185493 19.569812554813968 14 20.912104410387524 26.405518730225523 31.531200653136644 21.15117620625031 15 20.090080715888988 26.389899250928195 32.770673798723685 20.749346234459132 16 25.140249431421225 26.59233502067923 28.489930238328554 19.77748530957099 17 24.925555915105956 25.765691802288952 27.68915177994601 21.619600502659083 18 25.35446270020319 24.141860547550795 29.42389734594631 21.079779406299703 19 23.875917758753367 27.025564033576167 27.5415557047118 21.55696250295867 20 24.43574916900025 28.41720704042884 27.43532952413187 19.711714266439046 21 23.08147399402435 27.337496240919606 30.380573301210113 19.200456463845935 22 23.5914282675985 23.55243674168057 30.225133182932 22.631001807788927 23 20.945195752324913 27.26436140227706 30.09231043657931 21.698132408818715 24 21.766693461429835 26.03627698390828 29.633834124788894 22.563195429872998 25 21.882433116955138 27.81360449786118 27.411934608581106 22.892027776602568 26 21.118336422544647 27.04280720691465 27.520104648224397 24.318751722316303 27 21.889065106700713 26.476709709804712 28.776249243895997 22.85797593959858 28 20.177737325181322 27.196257728269085 28.203588363830956 24.422416582718636 29 21.80028791983068 27.032699139785194 26.901614432124443 24.265398508259686 30 23.498031556836725 26.545293631345984 27.49799039276244 22.45868441905485 31 25.850535533171954 27.26143417921694 24.892670393539984 21.995359894071115 32 23.2685875805701 27.82140280304477 25.904368994761874 23.00564062162326 33 23.85860597862441 26.852194674054857 26.34219466262039 22.947004684700342 34 22.178379942118738 25.947339714527146 28.136262233448328 23.73801810990579 35 20.79933771578265 28.88053156541257 27.02933740705209 23.290793311752687 36 22.856672410579623 28.588563934096317 26.50289463483464 22.051869020489416 37 21.6180454154084 28.83440493328561 27.009555782466162 22.537993868839827 38 22.47999826196131 28.835960020536298 26.62908539144176 22.054956326060633 39 22.723323678833317 25.828101112687797 27.188253602714084 24.2603216057648 40 23.43866381414878 25.244371670426702 28.096881935717725 23.220082579706798 41 20.377954808707116 26.68241573656822 27.33209917340252 25.607530281322145 42 21.770215276674033 26.172004084390927 28.91641291682913 23.141367722105908 43 22.024037532488176 25.60092116050673 29.136800796753526 23.238240510251572 44 22.598162024083273 25.25676663057187 27.41625683638081 24.72881450896405 45 21.948181291156928 24.347886739336506 27.183954243844543 26.519977725662024 46 22.367368780937376 25.584455530793587 27.06064497243722 24.987530715831817 47 19.713703863362717 27.07978626697875 29.279114149121433 23.9273957205371 48 20.366017227165088 27.418589467256837 28.4977514124423 23.717641893135777 49 23.297379563637943 24.833028223690153 28.871795634092546 22.99779657857936 50 20.824905179698337 25.529318540184715 28.471177715599698 25.174598564517254 51 20.36496525637786 24.715321840171335 27.191935500469384 27.727777402981424 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1320.0 1 2536.5 2 3753.0 3 7804.0 4 11855.0 5 9002.0 6 6149.0 7 5787.0 8 5425.0 9 5613.5 10 5802.0 11 6231.0 12 6660.0 13 6913.5 14 7167.0 15 7158.0 16 7149.0 17 7636.0 18 8123.0 19 8757.0 20 9391.0 21 10531.0 22 11671.0 23 14814.0 24 17957.0 25 22251.5 26 32374.5 27 38203.0 28 47273.0 29 56343.0 30 66203.0 31 76063.0 32 86194.5 33 96326.0 34 110882.0 35 125438.0 36 136084.5 37 146731.0 38 159053.5 39 171376.0 40 186756.0 41 202136.0 42 220395.0 43 238654.0 44 262942.0 45 287230.0 46 329248.5 47 371267.0 48 406569.5 49 441872.0 50 436732.5 51 431593.0 52 390607.5 53 349622.0 54 313189.0 55 276756.0 56 255150.0 57 233544.0 58 210965.5 59 188387.0 60 167655.0 61 146923.0 62 130317.5 63 113712.0 64 100570.0 65 87428.0 66 72734.5 67 58041.0 68 49818.0 69 41595.0 70 33784.5 71 25974.0 72 21749.0 73 17524.0 74 13237.0 75 7484.0 76 6018.0 77 4802.5 78 3587.0 79 2339.0 80 1091.0 81 922.0 82 753.0 83 572.5 84 392.0 85 275.5 86 159.0 87 116.0 88 73.0 89 42.5 90 12.0 91 7.5 92 3.0 93 1.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4372745.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.219484973930985 #Duplication Level Percentage of deduplicated Percentage of total 1 67.34031987528886 14.962672256086867 2 13.204407205408902 5.867902549804983 3 5.667227648755722 3.7776863875612197 4 2.97005874004705 2.639727021846713 5 1.7488182571645634 1.9428920493602095 6 1.0990477127364295 1.4652164483268193 7 0.7763848118836106 1.2075609463145285 8 0.5370149422225736 0.9545756351592714 9 0.41788619740077226 0.8356694475563654 >10 3.8230362091839805 19.82125900480978 >50 2.0065753804873037 32.218749936327434 >100 0.3992153663063514 11.511830561357403 >500 0.006096616264854701 0.9288462940089017 >1k 0.0035659453624395606 1.3916975512106249 >5k 3.450914866876994E-4 0.4737139102688287 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCAGAGCATTCGTATGCCGTCTTCTGC 6934 0.15857316170963548 No Hit CTGTCTCTTATACACATCTGACGCCAGAGCATTCGTATGCCGTCTTCTGCT 6306 0.14421147357094913 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5294 0.12106811625191957 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 4913 0.11235505386204775 No Hit CCTGTCTCTTATACACATCTGACGCCAGAGCATTCGTATGCCGTCTTCTGC 4860 0.11114300056371913 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.860679047143156E-5 0.0 0.0 0.15381642423694955 0.0 2 6.860679047143156E-5 0.0 0.0 0.5521474497140813 0.0 3 6.860679047143156E-5 0.0 0.0 0.8248137039777074 0.0 4 6.860679047143156E-5 0.0 0.0 1.2132424826967958 0.0 5 6.860679047143156E-5 0.0 0.0 2.263109328350956 0.0 6 6.860679047143156E-5 0.0 0.0 3.0825717026718915 0.0 7 6.860679047143156E-5 0.0 0.0 3.77085789361145 0.0 8 6.860679047143156E-5 0.0 0.0 5.021674028556433 0.0 9 6.860679047143156E-5 0.0 0.0 5.482871743035553 0.0 10 6.860679047143156E-5 0.0 0.0 6.413362773269422 0.0 11 6.860679047143156E-5 0.0 0.0 7.782571359637939 0.0 12 9.147572062857541E-5 0.0 0.0 8.935211177418303 0.0 13 9.147572062857541E-5 0.0 0.0 9.369103389289794 0.0 14 9.147572062857541E-5 0.0 0.0 9.561362485120902 0.0 15 9.147572062857541E-5 0.0 0.0 9.90215528232266 0.0 16 1.372135809428631E-4 0.0 0.0 10.547653704938202 0.0 17 1.372135809428631E-4 0.0 0.0 11.36645288028458 0.0 18 1.6008251110000697E-4 0.0 0.0 12.222253984625219 0.0 19 1.6008251110000697E-4 0.0 0.0 12.830133017132258 0.0 20 1.6008251110000697E-4 0.0 0.0 13.362361628679468 0.0 21 1.6008251110000697E-4 0.0 0.0 13.985562844391795 0.0 22 1.6008251110000697E-4 0.0 0.0 14.665753434055725 0.0 23 1.6008251110000697E-4 0.0 0.0 15.317586550324796 0.0 24 1.6008251110000697E-4 0.0 0.0 15.83135993523519 0.0 25 1.8295144125715082E-4 0.0 0.0 16.31947438050927 0.0 26 1.8295144125715082E-4 0.0 0.0 16.7653499117831 0.0 27 1.8295144125715082E-4 0.0 0.0 17.235100606140993 0.0 28 1.8295144125715082E-4 0.0 0.0 17.700849237721386 0.0 29 1.8295144125715082E-4 0.0 0.0 18.222375189955052 0.0 30 1.8295144125715082E-4 0.0 0.0 18.84322090586119 0.0 31 2.0582037141429467E-4 0.0 0.0 19.341374811474257 0.0 32 2.0582037141429467E-4 0.0 0.0 19.870013000986795 0.0 33 2.0582037141429467E-4 0.0 0.0 20.447613569965778 0.0 34 2.0582037141429467E-4 0.0 0.0 21.0109439265267 0.0 35 2.2868930157143855E-4 0.0 0.0 21.616421721367242 0.0 36 2.515582317285824E-4 0.0 0.0 22.16321784142455 0.0 37 2.515582317285824E-4 0.0 0.0 22.73141928010895 0.0 38 2.744271618857262E-4 0.0 0.0 23.400175404694306 0.0 39 2.744271618857262E-4 0.0 0.0 24.337893016857834 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGTAAG 520 0.0 39.375004 1 CGTAAGG 990 0.0 39.31818 2 TACGGGA 2570 0.0 37.82101 4 TAAGGGA 5060 0.0 36.996048 4 CGTATGG 585 0.0 36.923077 2 CGTTTTT 4205 0.0 36.385258 1 CACAACG 1800 0.0 36.25 12 ACGGGAG 3030 0.0 36.089108 5 TAGTACG 195 0.0 35.76923 1 TAGACGG 750 0.0 35.7 2 ACAACGA 1845 0.0 35.365856 13 CTACGAA 350 0.0 35.357143 11 TATCGCG 230 0.0 35.21739 1 ACGGGAT 3335 0.0 35.08246 5 ACGTACG 110 0.0 34.772728 1 TCGTAAG 195 0.0 34.615383 1 TTTACGG 590 0.0 34.322033 2 CGTTAGG 545 0.0 34.266056 2 TTACGGG 1685 0.0 34.183975 3 ATGGGCG 1210 0.0 34.028923 5 >>END_MODULE