##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935071.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1483655 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.03744603698299 33.0 31.0 34.0 30.0 34.0 2 32.36571103120335 34.0 31.0 34.0 30.0 34.0 3 32.42405747967014 34.0 31.0 34.0 30.0 34.0 4 35.93189184817225 37.0 35.0 37.0 35.0 37.0 5 30.403510250024432 37.0 35.0 37.0 0.0 37.0 6 32.880649477135854 37.0 35.0 37.0 17.0 37.0 7 35.08041559526979 37.0 35.0 37.0 32.0 37.0 8 35.66115707492645 37.0 35.0 37.0 35.0 37.0 9 37.57463089464869 39.0 37.0 39.0 35.0 39.0 10 37.46185872052465 39.0 37.0 39.0 35.0 39.0 11 37.32298479093859 39.0 37.0 39.0 35.0 39.0 12 37.11247426119954 39.0 37.0 39.0 34.0 39.0 13 36.997766327077386 39.0 37.0 39.0 33.0 39.0 14 38.00299867556811 40.0 37.0 41.0 33.0 41.0 15 38.16842662209206 40.0 37.0 41.0 33.0 41.0 16 38.304806036443786 40.0 37.0 41.0 34.0 41.0 17 38.33187701992714 40.0 37.0 41.0 34.0 41.0 18 38.28652213621091 40.0 37.0 41.0 34.0 41.0 19 38.28281372691091 40.0 37.0 41.0 34.0 41.0 20 38.207151258210295 40.0 37.0 41.0 34.0 41.0 21 38.14592678216971 40.0 37.0 41.0 34.0 41.0 22 38.1663533638211 40.0 36.0 41.0 34.0 41.0 23 38.11314288025181 40.0 36.0 41.0 34.0 41.0 24 38.092572734227296 40.0 36.0 41.0 34.0 41.0 25 38.03566866960311 40.0 36.0 41.0 34.0 41.0 26 37.97047157189508 40.0 36.0 41.0 34.0 41.0 27 37.929935867839895 40.0 36.0 41.0 34.0 41.0 28 37.874735029370036 40.0 36.0 41.0 34.0 41.0 29 37.87213536839764 40.0 36.0 41.0 34.0 41.0 30 37.753791818178755 40.0 36.0 41.0 33.0 41.0 31 33.109510634210785 38.0 33.0 41.0 9.0 41.0 32 34.001090550026795 38.0 33.0 41.0 16.0 41.0 33 35.96467777212357 38.0 34.0 41.0 29.0 41.0 34 36.8061240652308 38.0 35.0 41.0 31.0 41.0 35 36.93621225958865 39.0 35.0 41.0 32.0 41.0 36 37.08330575504413 39.0 35.0 41.0 32.0 41.0 37 37.1787464066781 39.0 35.0 41.0 32.0 41.0 38 37.151153064560155 39.0 35.0 41.0 32.0 41.0 39 37.14368434710226 39.0 35.0 41.0 33.0 41.0 40 37.122102510354495 39.0 35.0 41.0 33.0 41.0 41 37.0284439441784 39.0 35.0 41.0 32.0 41.0 42 36.92149320428267 39.0 35.0 41.0 32.0 41.0 43 36.903714138394704 39.0 35.0 41.0 32.0 41.0 44 36.84182306533527 39.0 35.0 41.0 32.0 41.0 45 36.82180493443557 39.0 35.0 41.0 32.0 41.0 46 36.76075772332516 39.0 35.0 41.0 32.0 41.0 47 36.642461353886176 39.0 35.0 41.0 32.0 41.0 48 36.62070360023051 39.0 35.0 41.0 32.0 41.0 49 36.57993401430926 38.0 35.0 40.0 32.0 41.0 50 36.39104104390846 38.0 35.0 40.0 31.0 41.0 51 35.71671042122326 37.0 34.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 5.0 10 8.0 11 12.0 12 19.0 13 32.0 14 25.0 15 50.0 16 91.0 17 188.0 18 297.0 19 556.0 20 888.0 21 1493.0 22 2337.0 23 3741.0 24 5337.0 25 7025.0 26 8638.0 27 10595.0 28 12971.0 29 16775.0 30 22317.0 31 32764.0 32 49441.0 33 58474.0 34 112758.0 35 142066.0 36 170683.0 37 171787.0 38 254971.0 39 396986.0 40 324.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.93626887652453 20.841637712271382 25.57973383300026 12.642359578203827 2 31.197818899946416 24.12070191520266 26.405599684562787 18.275879500288138 3 31.669424495586913 23.899828464164514 26.94480859768612 17.485938442562453 4 27.887413178939845 25.737991649001955 27.170602330056514 19.20399284200168 5 22.400827685681644 38.443303867812936 22.070966633078445 17.084901813426974 6 27.647263009257543 32.13031331407908 24.22941991231115 15.993003764352226 7 79.69561656854188 6.147925225203973 8.547202685260388 5.609255520993762 8 79.89013618395113 4.822819321203379 8.885691080473562 6.40135341437194 9 74.53161280755971 6.617508787420256 11.41350246519575 7.437375939824285 10 42.12111306199892 24.159053149148555 17.920069018740882 15.799764770111649 11 31.45738059050116 24.18237393464114 24.491205839632528 19.869039635225167 12 27.856139061978695 21.478982647583162 29.82802605727073 20.836852233167413 13 24.867236655421916 23.369583899221855 32.08724400214336 19.67593544321288 14 20.366257654239025 26.229817578884578 31.79883463473651 21.605090132139885 15 18.50551509616454 25.265172833306938 35.03968240595017 21.189629664578355 16 23.523595445032704 25.176675170440564 29.896640391465674 21.403088993061058 17 24.05471622445919 24.64973326009079 26.62364228880703 24.671908226642987 18 24.296618823109146 23.78430295452784 30.14764214052458 21.771436081838434 19 24.595677566550176 25.264970629964512 27.80700364977033 22.33234815371498 20 24.93430076399163 27.89246826250038 26.937933684043795 20.235297289464192 21 23.688391169106023 26.578618344561235 30.094664864810216 19.638325621522522 22 22.715253883146687 23.974171893061392 28.404042718826144 24.906531504965777 23 21.317152572532024 25.941408211477736 29.213462698538407 23.527976517451833 24 23.155180955141187 25.21259996427741 28.127563348622154 23.504655731959247 25 22.66301801968787 26.04338609717219 26.779204060243117 24.514391822896833 26 21.637510068041426 26.22840215548763 27.63722024325062 24.496867533220325 27 23.064930863307172 25.219542279033874 28.790857712877994 22.924669144780964 28 19.503792997698252 25.270430120209888 30.171973942729274 25.053802939362583 29 21.22265621050716 24.642184335307064 30.03703691222016 24.09812254196562 30 25.073753669148154 23.688458570220167 28.27894625098153 22.958841509650156 31 26.851727659058206 25.238077585422484 26.286097509191826 21.62409724632748 32 25.643427885862952 24.393811229699626 27.718168981333264 22.24459190310416 33 25.508153849783138 24.604035304703586 25.934802902291977 23.9530079432213 34 23.497983021659348 23.30272199399456 30.304147527558627 22.89514745678746 35 23.75262443088184 24.883143318359053 28.99568969875072 22.368542552008385 36 25.425183078276287 26.228806562172473 26.93402441942365 21.41198594012759 37 24.534005547111693 26.23547927247237 28.61905227293407 20.61146290748186 38 24.02209408521523 25.669849122606 27.623268212623554 22.68478857955522 39 23.758016520013076 23.73489793786291 28.41961237619258 24.087473165931435 40 26.77293575662806 22.26892370530885 28.145829050554205 22.81231148750889 41 23.838560851410872 23.775945216374428 25.999238367410214 26.386255564804483 42 23.92685631093482 23.607981639936508 29.212519082940442 23.25264296618823 43 23.49616319157756 23.032308724063206 29.968624781367637 23.502903302991598 44 22.57950803926789 22.204825245761313 29.339367979752705 25.876298735218096 45 22.822826061314792 20.96720598791498 28.38645102803549 27.823516922734733 46 25.024483454711504 21.607718775591362 28.78843127276894 24.579366496928195 47 21.71414513481908 23.46785472363858 31.21143392500278 23.60656621653956 48 21.620457586163898 23.335681138809225 30.3025973019334 24.741263973093474 49 24.141461458357906 21.200953051753945 31.598720726853614 23.058864763034535 50 22.53778674961497 21.44110322143625 30.190576650232025 25.83053337871675 51 21.386912725667358 22.27714664123398 27.654542329584707 28.681398303513955 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1086.0 1 1504.0 2 1922.0 3 2506.5 4 3091.0 5 2592.0 6 2093.0 7 2206.0 8 2319.0 9 2577.0 10 2835.0 11 3007.0 12 3179.0 13 3357.0 14 3535.0 15 3528.5 16 3522.0 17 3412.0 18 3302.0 19 3448.0 20 3594.0 21 3877.0 22 4160.0 23 4689.0 24 5218.0 25 5941.0 26 8081.5 27 9499.0 28 11371.0 29 13243.0 30 15895.0 31 18547.0 32 21072.0 33 23597.0 34 26698.0 35 29799.0 36 33297.0 37 36795.0 38 40289.5 39 43784.0 40 50451.5 41 57119.0 42 65140.5 43 73162.0 44 84436.0 45 95710.0 46 114349.5 47 132989.0 48 151317.0 49 169645.0 50 167427.5 51 165210.0 52 142569.5 53 119929.0 54 107355.0 55 94781.0 56 86210.0 57 77639.0 58 71600.0 59 65561.0 60 60890.5 61 56220.0 62 50512.0 63 44804.0 64 39899.0 65 34994.0 66 30154.5 67 25315.0 68 21314.0 69 17313.0 70 14306.5 71 11300.0 72 9842.5 73 8385.0 74 6465.0 75 4287.5 76 4030.0 77 2787.5 78 1545.0 79 1366.0 80 1187.0 81 759.5 82 332.0 83 204.5 84 77.0 85 72.5 86 68.0 87 37.0 88 6.0 89 4.0 90 2.0 91 1.5 92 1.0 93 1.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1483655.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.17273700590629 #Duplication Level Percentage of deduplicated Percentage of total 1 67.78097787933967 17.74013708039109 2 13.585309605462648 7.1112947089517276 3 5.715909431699976 4.488029829163882 4 2.8793181727740214 3.014385491693644 5 1.6606553678367164 2.1731948099918474 6 1.0794006734108101 1.6950521969507564 7 0.755721333945378 1.384550700617354 8 0.5647227112653224 1.1824271202567707 9 0.39644693602154235 0.9338491253960265 >10 3.9528291867082794 25.406405333264587 >50 1.4949947283123872 26.343598259988532 >100 0.12528417926300414 5.092614889287931 >500 0.004941603356029846 0.9110529636310911 >1k 0.0026161429531922718 0.9743511737138525 >5k 8.720476510640905E-4 1.5490563167008473 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCTGTTCGGATCGTATGCCGTCTTCTGCT 7566 0.509956829586393 Illumina Single End Adapter 1 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCTGTTCGGATCGTATGCCGTCTTCTGC 7346 0.4951285844755014 No Hit GCTGTCTCTTATACACATCTGACGCTGTTCGGATCGTATGCCGTCTTCTGC 5449 0.3672686709511308 No Hit TCTGTCTCTTATACACATCTGACGCTGTTCGGATCGTATGCCGTCTTCTGC 2056 0.13857669067269682 No Hit ACTGTCTCTTATACACATCTGACGCTGTTCGGATCGTATGCCGTCTTCTGC 1748 0.11781714751744846 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGTTCGGATCGTATGCC 1583 0.1066959636842797 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.740111414041674E-5 0.0 0.0 0.5332102139648368 0.0 2 6.740111414041674E-5 0.0 0.0 1.7052481877525436 0.0 3 6.740111414041674E-5 0.0 0.0 2.3390882651290226 0.0 4 6.740111414041674E-5 0.0 0.0 3.0599431808607798 0.0 5 6.740111414041674E-5 0.0 0.0 4.735197872820838 0.0 6 6.740111414041674E-5 0.0 0.0 5.847720662822557 0.0 7 6.740111414041674E-5 0.0 0.0 6.875655054578052 0.0 8 6.740111414041674E-5 0.0 0.0 8.57672437325389 0.0 9 6.740111414041674E-5 0.0 0.0 9.163248868503796 0.0 10 6.740111414041674E-5 0.0 0.0 10.371818246155609 0.0 11 6.740111414041674E-5 0.0 0.0 12.26585695461546 0.0 12 6.740111414041674E-5 0.0 0.0 13.822418284574244 0.0 13 6.740111414041674E-5 0.0 0.0 14.439542885643899 0.0 14 6.740111414041674E-5 0.0 0.0 14.69175785475734 0.0 15 1.3480222828083347E-4 0.0 0.0 15.166598703876575 0.0 16 1.3480222828083347E-4 0.0 0.0 16.055754201616953 0.0 17 1.3480222828083347E-4 0.0 0.0 17.11449090253462 0.0 18 1.3480222828083347E-4 0.0 0.0 18.356356430571797 0.0 19 1.3480222828083347E-4 0.0 0.0 19.129312407534098 0.0 20 1.3480222828083347E-4 0.0 0.0 19.84295540405283 0.0 21 1.3480222828083347E-4 0.0 0.0 20.618337821124182 0.0 22 1.3480222828083347E-4 0.0 0.0 21.38772153903704 0.0 23 1.3480222828083347E-4 0.0 0.0 22.101229733327493 0.0 24 1.3480222828083347E-4 0.0 0.0 22.68451897509866 0.0 25 1.3480222828083347E-4 0.0 0.0 23.195082414712314 0.0 26 1.3480222828083347E-4 0.0 0.0 23.700186364080597 0.0 27 1.3480222828083347E-4 0.0 0.0 24.23919307386151 0.0 28 1.3480222828083347E-4 0.0 0.0 24.738635329641998 0.0 29 1.3480222828083347E-4 0.0 0.0 25.312286212091085 0.0 30 1.3480222828083347E-4 0.0 0.0 25.933657083351587 0.0 31 1.3480222828083347E-4 0.0 0.0 26.44361391293798 0.0 32 1.3480222828083347E-4 0.0 0.0 26.98066599040882 0.0 33 1.3480222828083347E-4 0.0 0.0 27.536051170925855 0.0 34 1.3480222828083347E-4 0.0 0.0 28.109836855603223 0.0 35 1.3480222828083347E-4 0.0 0.0 28.733229760287937 0.0 36 1.3480222828083347E-4 0.0 0.0 29.30014053132298 0.0 37 1.3480222828083347E-4 0.0 0.0 29.885991015431486 0.0 38 2.022033424212502E-4 0.0 0.0 30.55002679194287 0.0 39 2.022033424212502E-4 0.0 0.0 31.522624868989084 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGGTAT 60 0.0 45.000004 42 CCTTACG 35 1.2122473E-7 45.0 1 CGTATCG 25 3.8913568E-5 45.0 29 TTTCGAT 20 7.033951E-4 45.0 39 TAGCGCG 25 3.8913568E-5 45.0 1 CCGTACA 25 3.8913568E-5 45.0 20 CGTAGTC 25 3.8913568E-5 45.0 30 CTCGACC 25 3.8913568E-5 45.0 28 ACCGTAC 25 3.8913568E-5 45.0 19 AGTACGC 20 7.033951E-4 45.0 30 CCCGAAT 20 7.033951E-4 45.0 36 CCCCGAT 65 0.0 41.53846 40 GTAACGG 120 0.0 41.250004 2 CGTAAGG 230 0.0 41.086956 2 CTATCGG 55 6.184564E-11 40.90909 2 TCGTTAG 45 1.9290383E-8 40.0 1 CTTACGG 190 0.0 39.078945 2 ACGGGTA 245 0.0 38.57143 5 CATACGG 175 0.0 38.57143 2 ACGATTT 35 6.2495183E-6 38.571426 28 >>END_MODULE