##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935068.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1694442 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.99418451620061 33.0 31.0 34.0 30.0 34.0 2 32.317718753430334 34.0 31.0 34.0 30.0 34.0 3 32.37923930119768 34.0 31.0 34.0 30.0 34.0 4 35.894159847312565 37.0 35.0 37.0 35.0 37.0 5 30.381830124607394 37.0 35.0 37.0 0.0 37.0 6 32.850390866137644 37.0 35.0 37.0 17.0 37.0 7 35.06684973578322 37.0 35.0 37.0 32.0 37.0 8 35.65188776010037 37.0 35.0 37.0 35.0 37.0 9 37.564749339310524 39.0 37.0 39.0 35.0 39.0 10 37.40714583325956 39.0 37.0 39.0 35.0 39.0 11 37.273047410297906 39.0 37.0 39.0 34.0 39.0 12 37.11828731818498 39.0 37.0 39.0 34.0 39.0 13 37.08666333813728 39.0 37.0 39.0 33.0 39.0 14 38.284764541955404 40.0 38.0 41.0 34.0 41.0 15 38.39584535794084 40.0 38.0 41.0 34.0 41.0 16 38.46119017352025 40.0 38.0 41.0 34.0 41.0 17 38.44527165875256 40.0 38.0 41.0 34.0 41.0 18 38.38343596298959 40.0 37.0 41.0 34.0 41.0 19 38.370953387604885 40.0 37.0 41.0 34.0 41.0 20 38.292952488193755 40.0 37.0 41.0 34.0 41.0 21 38.23297404101173 40.0 37.0 41.0 34.0 41.0 22 38.21950352977559 40.0 37.0 41.0 34.0 41.0 23 38.14911103478313 40.0 37.0 41.0 34.0 41.0 24 38.130573368696005 40.0 37.0 41.0 34.0 41.0 25 38.08133946160447 40.0 37.0 41.0 34.0 41.0 26 38.0040803993291 40.0 36.0 41.0 34.0 41.0 27 37.95167848766733 40.0 36.0 41.0 34.0 41.0 28 37.91739699558911 40.0 36.0 41.0 34.0 41.0 29 37.90880537663727 40.0 36.0 41.0 34.0 41.0 30 37.73182203934983 40.0 36.0 41.0 33.0 41.0 31 33.157193341524824 38.0 33.0 41.0 9.0 41.0 32 34.03548719873563 38.0 33.0 41.0 16.0 41.0 33 35.95276380070843 38.0 34.0 41.0 29.0 41.0 34 36.84406134880982 38.0 35.0 41.0 31.0 41.0 35 36.97464770113111 39.0 35.0 41.0 32.0 41.0 36 37.09509502243216 39.0 35.0 41.0 32.0 41.0 37 37.2371848667585 39.0 35.0 41.0 33.0 41.0 38 37.19912395939194 39.0 35.0 41.0 32.0 41.0 39 37.23509037193365 39.0 35.0 41.0 33.0 41.0 40 37.21940556242114 39.0 35.0 41.0 33.0 41.0 41 37.1347664894992 39.0 35.0 41.0 32.0 41.0 42 37.03300791647044 39.0 35.0 41.0 32.0 41.0 43 37.02137635870688 39.0 35.0 41.0 32.0 41.0 44 36.962905192387815 39.0 35.0 41.0 32.0 41.0 45 36.93567321867612 39.0 35.0 41.0 32.0 41.0 46 36.851727589377504 39.0 35.0 41.0 32.0 41.0 47 36.73613791442847 39.0 35.0 41.0 32.0 41.0 48 36.72251218985365 39.0 35.0 41.0 32.0 41.0 49 36.68756794272097 39.0 35.0 41.0 31.0 41.0 50 36.49609901076579 39.0 35.0 40.0 31.0 41.0 51 35.79680803473946 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 6.0 10 7.0 11 9.0 12 18.0 13 15.0 14 32.0 15 54.0 16 86.0 17 162.0 18 312.0 19 552.0 20 968.0 21 1630.0 22 2616.0 23 4302.0 24 6107.0 25 7916.0 26 9836.0 27 11955.0 28 15056.0 29 19385.0 30 25941.0 31 35586.0 32 53790.0 33 63987.0 34 114845.0 35 163947.0 36 196818.0 37 199519.0 38 301908.0 39 456634.0 40 442.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.02392291975766 20.715610212683586 25.69311903269631 11.56734783486245 2 31.175631859927925 24.578238735819816 26.018594912071347 18.227534492180908 3 31.55345535580445 24.15084139793513 26.8346157614129 17.461087484847518 4 27.69247929406849 26.073893352501887 27.16628837103896 19.067338982390662 5 22.560288283694575 39.41852243983565 21.220968318773966 16.800220957695807 6 27.273993444449555 33.520415570435574 23.78216545623869 15.423425528876173 7 79.78750526722071 5.876447821760792 8.791979896626737 5.544067014391758 8 80.67080490214478 4.648846050794303 8.360451405241372 6.319897641819548 9 75.18793797604168 6.483078205096426 11.094507808470281 7.234476010391622 10 41.10196749136294 23.75690640340596 18.60659733410763 16.534528771123473 11 28.943392574074533 26.45962505650828 24.687950369502172 19.909031999915015 12 25.833106119890797 23.641647220736974 29.52016061924811 21.005086040124123 13 24.14423155233404 24.524238657918062 31.54401271923146 19.78751707051643 14 20.40636386491836 27.479724888783448 29.94236450701765 22.171546739280544 15 19.159935837284486 26.632779404665367 32.93792292683963 21.26936183121051 16 21.706555904539666 26.759664833614842 30.096869647943098 21.436909613902394 17 21.420916148206903 26.222791927962124 27.887823838172093 24.468468085658877 18 21.24616835512812 25.787840480819053 31.025198856024577 21.940792308028247 19 22.66279990699003 27.62874149720085 28.057791296485806 21.650667299323317 20 23.77030314404388 27.72806623065292 28.072899515002582 20.428731110300618 21 23.539961828141653 28.07868312990353 28.8667891848762 19.514565857078615 22 21.71139525578332 25.509046636001703 27.95681410163346 24.82274400658152 23 21.258384766194418 26.364077377685398 28.436145940669554 23.941391915450634 24 22.387724100323293 25.196790447828842 29.157386325409778 23.258099126438083 25 21.110312421434312 27.2791868945647 26.799796039050023 24.810704644950963 26 20.754915187418632 27.673771070358267 28.647365917511486 22.923947824711615 27 22.34440600504473 26.970766777499612 28.15156848095125 22.533258736504408 28 20.77120373550703 26.279211681485705 28.71676929632292 24.232815286684346 29 22.406727406426423 24.855321102758314 28.144899618871584 24.593051871943683 30 23.29527950794421 26.05400479922004 28.03695847954666 22.613757213289094 31 26.487303784962833 27.042353766018547 24.44350411521905 22.026838333799564 32 24.268166157354457 27.039934090396724 25.701263306740508 22.990636445508315 33 22.753803316962163 27.93686653187303 26.557946509824472 22.751383641340336 34 24.451589372784667 25.005990172575988 27.53573152695696 23.006688927682386 35 22.28084525761283 25.321079151720742 28.264585037434152 24.133490553232274 36 23.187456401576448 27.99995514747628 28.129673367397643 20.68291508354963 37 23.722794878786054 26.171447591596525 28.897654803174145 21.20810272644328 38 21.109309141298432 27.78944336837732 27.19544251145805 23.9058049788662 39 23.300413941580768 27.02411767413697 26.735645126832313 22.939823257449945 40 23.287843431642983 25.041045960853193 29.407439145158108 22.263671462345716 41 21.542667143519814 25.677007534043657 28.237909589115475 24.542415733321057 42 23.28005325647027 24.57694037329103 29.125104311625893 23.017902058612805 43 22.732852467065854 24.64740604871692 29.22962249519311 23.390118989024113 44 22.55149482838598 24.419956540265172 27.35266241039823 25.675886220950613 45 22.774577117422727 23.421633788586448 27.298072167710668 26.505716926280154 46 24.331549855350612 24.22821200135502 28.744270975341735 22.695967167952634 47 20.93143347485485 24.66941919522769 31.10475306915197 23.29439426076549 48 21.235073257154863 23.313810682218687 30.509866965053984 24.941249095572466 49 22.883757602797854 22.91686584728188 31.177107271892456 23.02226927802781 50 21.938077550013517 22.184530364568396 30.538194874772934 25.33919721064516 51 20.682974100028208 22.719573759385096 28.06198146646507 28.535470674121626 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1406.0 1 1791.0 2 2176.0 3 2994.5 4 3813.0 5 3193.5 6 2574.0 7 2679.5 8 2785.0 9 3006.5 10 3228.0 11 3393.5 12 3559.0 13 3659.0 14 3759.0 15 3775.5 16 3792.0 17 3950.0 18 4108.0 19 4242.0 20 4376.0 21 4947.5 22 5519.0 23 6184.0 24 6849.0 25 7744.5 26 11400.0 27 14160.0 28 15906.5 29 17653.0 30 20681.0 31 23709.0 32 28074.0 33 32439.0 34 35668.0 35 38897.0 36 42822.0 37 46747.0 38 52717.0 39 58687.0 40 64706.5 41 70726.0 42 78968.0 43 87210.0 44 101013.0 45 114816.0 46 138241.5 47 161667.0 48 181045.5 49 200424.0 50 194513.0 51 188602.0 52 163871.0 53 139140.0 54 121630.5 55 104121.0 56 93217.0 57 82313.0 58 74849.5 59 67386.0 60 60371.5 61 53357.0 62 48549.0 63 43741.0 64 37587.0 65 31433.0 66 26249.5 67 21066.0 68 17590.0 69 14114.0 70 11900.0 71 9686.0 72 8178.5 73 6671.0 74 5528.0 75 3501.5 76 2618.0 77 1891.5 78 1165.0 79 885.5 80 606.0 81 420.0 82 234.0 83 150.5 84 67.0 85 38.0 86 9.0 87 7.0 88 5.0 89 4.5 90 4.0 91 2.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1694442.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.97873599564538 #Duplication Level Percentage of deduplicated Percentage of total 1 66.15706644652171 17.18676963460557 2 13.937065563179077 7.241346936396599 3 6.288969081362356 4.901384023484672 4 3.172045017695452 3.2962288032404965 5 1.8551646100789372 2.4097415816852554 6 1.1981007919176896 1.8675086501641993 7 0.7638425735141674 1.3890565191691233 8 0.5426710318934982 1.1278325976036516 9 0.4190359145395227 0.9797421056864474 >10 4.153897342092783 27.41167537267289 >50 1.3981333962186848 24.005275568741233 >100 0.10429452541855506 4.535921179799448 >500 0.0056237242759339095 1.0188954910503518 >1k 0.003323109799415492 1.2134040547788585 >5k 7.668714921728058E-4 1.415217480921205 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTTCTGC 7832 0.4622170602475623 TruSeq Adapter, Index 15 (95% over 23bp) CTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTTCTGCT 7476 0.4412071938726731 TruSeq Adapter, Index 14 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTTCTGC 6003 0.35427592092264 TruSeq Adapter, Index 15 (95% over 23bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCC 2316 0.13668216439394207 No Hit TCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTTCTGC 1973 0.11643951224060782 TruSeq Adapter, Index 15 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.46245312616188694 0.0 2 0.0 0.0 0.0 1.5433989478542198 0.0 3 0.0 0.0 0.0 2.1251243772286097 0.0 4 0.0 0.0 0.0 2.8612369145712866 0.0 5 0.0 0.0 0.0 4.60505582368709 0.0 6 0.0 0.0 0.0 5.795359180190292 0.0 7 0.0 0.0 0.0 6.821478693280738 0.0 8 0.0 0.0 0.0 8.697081399068248 0.0 9 0.0 0.0 0.0 9.281698635893115 0.0 10 0.0 0.0 0.0 10.675844909415607 0.0 11 0.0 0.0 0.0 12.736641324990764 0.0 12 0.0 0.0 0.0 14.41689948667467 0.0 13 0.0 0.0 0.0 15.049910235936078 0.0 14 0.0 0.0 0.0 15.315543406029832 0.0 15 0.0 0.0 0.0 15.790508025650922 0.0 16 5.901647858114943E-5 0.0 0.0 16.775847152041795 0.0 17 5.901647858114943E-5 0.0 0.0 17.8913176137041 0.0 18 1.1803295716229885E-4 0.0 0.0 19.15539156843374 0.0 19 1.1803295716229885E-4 0.0 0.0 19.98941244374254 0.0 20 1.1803295716229885E-4 0.0 0.0 20.69949871403093 0.0 21 1.1803295716229885E-4 0.0 0.0 21.536529429747375 0.0 22 1.7704943574344827E-4 0.0 0.0 22.395927390846072 0.0 23 1.7704943574344827E-4 0.0 0.0 23.221685959153515 0.0 24 1.7704943574344827E-4 0.0 0.0 23.914893516567695 0.0 25 1.7704943574344827E-4 0.0 0.0 24.5291370256403 0.0 26 1.7704943574344827E-4 0.0 0.0 25.08973455568264 0.0 27 1.7704943574344827E-4 0.0 0.0 25.6032959522958 0.0 28 1.7704943574344827E-4 0.0 0.0 26.138516396548244 0.0 29 1.7704943574344827E-4 0.0 0.0 26.744556615098066 0.0 30 1.7704943574344827E-4 0.0 0.0 27.36375750837149 0.0 31 2.360659143245977E-4 0.0 0.0 27.974519045207803 0.0 32 2.360659143245977E-4 0.0 0.0 28.585044516129795 0.0 33 2.360659143245977E-4 0.0 0.0 29.188369976664884 0.0 34 2.360659143245977E-4 0.0 0.0 29.82185285775494 0.0 35 2.360659143245977E-4 0.0 0.0 30.45179475013013 0.0 36 2.360659143245977E-4 0.0 0.0 31.109061272088393 0.0 37 2.360659143245977E-4 0.0 0.0 31.738176933763445 0.0 38 2.9508239290574717E-4 0.0 0.0 32.38812541237765 0.0 39 2.9508239290574717E-4 0.0 0.0 33.020545996853244 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACACG 20 7.034234E-4 45.000004 27 AATTCCG 20 7.034234E-4 45.000004 13 GCGTAGT 25 3.891592E-5 45.0 14 TTGCGAA 30 2.1661144E-6 44.999996 13 GCGTAAG 220 0.0 42.954544 1 CTAACGG 150 0.0 42.0 2 CGTGCAA 105 0.0 40.714287 25 CGTATGG 190 0.0 40.263157 2 ATATACG 45 1.9292202E-8 40.0 1 CGTAAGG 400 0.0 39.9375 2 TACGGGA 530 0.0 39.905663 4 CACAACG 125 0.0 39.6 12 CGTCTAC 35 6.250044E-6 38.571426 41 ATATGCG 35 6.250044E-6 38.571426 1 GCGCATT 35 6.250044E-6 38.571426 26 TCATCGC 35 6.250044E-6 38.571426 12 AACTCGC 35 6.250044E-6 38.571426 19 TAATCCG 35 6.250044E-6 38.571426 1 TACGGGC 395 0.0 37.594936 4 GCTAACG 90 0.0 37.5 1 >>END_MODULE