##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935067.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1015911 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.79791339989428 33.0 31.0 34.0 30.0 34.0 2 32.116288730016706 33.0 31.0 34.0 30.0 34.0 3 32.17772127676539 34.0 31.0 34.0 30.0 34.0 4 35.7546556735777 37.0 35.0 37.0 35.0 37.0 5 30.26638750835457 37.0 35.0 37.0 0.0 37.0 6 32.729423148287594 37.0 35.0 37.0 17.0 37.0 7 34.92569920002835 37.0 35.0 37.0 32.0 37.0 8 35.484405622146035 37.0 35.0 37.0 33.0 37.0 9 37.33031239941294 39.0 37.0 39.0 34.0 39.0 10 37.24074549837535 39.0 37.0 39.0 34.0 39.0 11 37.17051001514896 39.0 37.0 39.0 34.0 39.0 12 37.05299578407951 39.0 37.0 39.0 33.0 39.0 13 36.976110112007845 39.0 37.0 39.0 33.0 39.0 14 38.1104466828295 40.0 37.0 41.0 33.0 41.0 15 38.246760789084874 40.0 37.0 41.0 34.0 41.0 16 38.30446564708917 40.0 37.0 41.0 34.0 41.0 17 38.28674362222675 40.0 37.0 41.0 34.0 41.0 18 38.207510303560056 40.0 37.0 41.0 34.0 41.0 19 38.15537679973935 40.0 37.0 41.0 34.0 41.0 20 38.066671194622366 40.0 37.0 41.0 34.0 41.0 21 37.986726199440696 40.0 36.0 41.0 34.0 41.0 22 37.98542785736152 40.0 36.0 41.0 34.0 41.0 23 37.881641206759255 40.0 36.0 41.0 33.0 41.0 24 37.88860638382693 40.0 36.0 41.0 33.0 41.0 25 37.828940724138235 40.0 36.0 41.0 33.0 41.0 26 37.747864724370544 39.0 36.0 41.0 33.0 41.0 27 37.69020613026141 39.0 36.0 41.0 33.0 41.0 28 37.63873705472231 39.0 36.0 41.0 33.0 41.0 29 37.63454082099712 39.0 36.0 41.0 33.0 41.0 30 37.43089109183777 39.0 36.0 41.0 33.0 41.0 31 32.815951397317285 38.0 33.0 40.0 9.0 41.0 32 33.647066524528235 38.0 32.0 40.0 16.0 41.0 33 35.48967872185654 38.0 33.0 40.0 27.0 41.0 34 36.293069963805884 38.0 35.0 40.0 30.0 41.0 35 36.422035001097534 39.0 35.0 40.0 30.0 41.0 36 36.528539409456144 39.0 35.0 40.0 31.0 41.0 37 36.55562741224379 39.0 35.0 40.0 31.0 41.0 38 36.56101567952311 39.0 35.0 40.0 31.0 41.0 39 36.60526365006383 39.0 35.0 40.0 31.0 41.0 40 36.51119340178421 39.0 35.0 40.0 31.0 41.0 41 36.4627856180315 39.0 35.0 40.0 31.0 41.0 42 36.366532107635415 39.0 35.0 40.0 30.0 41.0 43 36.31487600783927 39.0 35.0 40.0 30.0 41.0 44 36.22254410081198 39.0 35.0 40.0 30.0 41.0 45 36.22982229742566 39.0 35.0 40.0 30.0 41.0 46 36.183971824303505 39.0 35.0 40.0 30.0 41.0 47 36.071360581783246 39.0 35.0 40.0 30.0 41.0 48 36.06053581465306 39.0 35.0 40.0 30.0 41.0 49 36.041057730450795 39.0 35.0 40.0 30.0 41.0 50 35.82191550244067 38.0 35.0 40.0 29.0 41.0 51 35.15487970895088 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 5.0 10 12.0 11 10.0 12 9.0 13 10.0 14 19.0 15 36.0 16 71.0 17 176.0 18 342.0 19 680.0 20 1162.0 21 1784.0 22 2894.0 23 4765.0 24 6302.0 25 7741.0 26 8322.0 27 9308.0 28 10890.0 29 13492.0 30 17163.0 31 23413.0 32 34427.0 33 41441.0 34 70352.0 35 101204.0 36 119541.0 37 119400.0 38 189019.0 39 231746.0 40 171.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.91707935045491 23.45894473039469 24.48915308526042 12.134822833889977 2 31.465650042178893 24.62321994741665 25.93406312167109 17.977066888733365 3 30.00686083721901 26.184183457015425 26.6069567117592 17.201998994006367 4 26.81691604874836 27.76237288502635 26.04598237444028 19.37472869178501 5 20.82072150021016 39.95281082693267 21.596183130215145 17.630284542642023 6 25.365115644972835 33.164814634352815 26.161543678530897 15.308526042143455 7 74.61155553980615 7.750482079630991 10.750744897929051 6.8872174826338135 8 72.38025771942621 6.699012019753699 12.035699977655522 8.88503028316457 9 66.96108222078509 8.439026647019276 15.101125984461236 9.498765147734398 10 35.42830031370858 24.64221767457976 22.20598064200506 17.7235013697066 11 26.0208817504683 25.742510908928047 26.99094704162077 21.245660298982884 12 23.294461818013588 23.58110110039167 32.23343383426304 20.891003247331703 13 21.231977998072665 26.87922465649058 33.451158615272405 18.437638730164355 14 17.622902006179675 31.04474703000558 29.637044977365147 21.6953059864496 15 15.589357729171157 28.21841677076043 35.55764235252891 20.634583147539498 16 17.88414536312728 29.04900133968428 31.19348053126701 21.873372765921424 17 16.980621333955433 28.04231866767857 27.341962041950524 27.63509795641547 18 18.073433598021875 27.674176182756167 31.559260604521462 22.6931296147005 19 18.40308845952057 29.428266846209954 29.503667151945397 22.66497754232408 20 20.521088953658342 29.775738229037778 29.181591694548047 20.521581122755833 21 19.31940888522715 30.0992901937276 31.057149691262325 19.524151229782923 22 17.32956922407573 28.432805629627005 27.233094237585775 27.004530908711494 23 17.127779894104897 29.402280317862488 28.55269802177553 24.917241766257085 24 20.665885102139853 26.00286836150017 28.47808518659607 24.853161349763905 25 17.8590447391553 30.09781368643513 25.781392267629744 26.261749306779826 26 18.830980272878232 29.511738725144234 28.30858214942057 23.348698852556964 27 21.09860017265292 27.351214820983333 28.97596344561679 22.574221560746956 28 17.95787229393126 26.72743970682471 29.161314327731464 26.153373671512565 29 22.07073257401485 24.636902248326873 28.750943734244437 24.541421443413842 30 22.144951673916317 26.533623516233213 29.390665127161732 21.930759682688738 31 22.793138375310434 30.23670380574676 23.097791046656646 23.872366772286156 32 24.387175648260527 29.63468256569719 23.621065231107842 22.357076554934437 33 21.77808882864739 27.035045392755862 28.461843606378906 22.725022172217844 34 20.435549964514607 28.005012250088836 26.79319349824936 24.766244287147202 35 24.177610046549354 27.308592977140716 25.531271932285403 22.982525044024527 36 24.233126720746206 25.43510209063589 29.94868644989571 20.38308473872219 37 21.911466654067137 26.962696535424858 29.483685086587307 21.642151723920698 38 21.731529632024852 28.17540119163982 26.123449790385184 23.969619385950146 39 25.71002774849372 24.48777501178745 28.66402667162773 21.138170568091102 40 23.55285059419575 26.088308916824403 29.747684590480862 20.611155898498986 41 21.416541409631357 27.66472653608436 25.75156682032186 25.167165233962425 42 25.7543229672678 23.49379030249697 27.57751417200916 23.174372558226064 43 25.932980349656614 20.842278506680213 30.125670457353053 23.09907068631012 44 22.02181096572436 22.098589344932776 28.037495410523167 27.8421042788197 45 22.58219470012629 21.57246057971614 28.637843275641274 27.207501444516303 46 24.20586055274527 23.19396088830616 30.49597848630441 22.104200072644158 47 19.824079077793233 23.977395657690487 32.688394947982644 23.510130316533633 48 20.26053463344722 22.265139367523336 31.456692564604577 26.017633434424862 49 23.204591740811942 19.246961594076648 33.66544904031948 23.882997624791933 50 21.282179246016632 19.312912253140286 33.250845792594035 26.15406270824905 51 19.59177526377803 19.8595152528125 28.942791248445975 31.605918234963497 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2276.0 1 2260.0 2 2244.0 3 2538.5 4 2833.0 5 2569.0 6 2305.0 7 2499.0 8 2693.0 9 3033.5 10 3374.0 11 3918.0 12 4462.0 13 4493.0 14 4524.0 15 4683.5 16 4843.0 17 4655.0 18 4467.0 19 4569.5 20 4672.0 21 4606.0 22 4540.0 23 4930.0 24 5320.0 25 5257.0 26 5377.0 27 5560.0 28 6868.5 29 8177.0 30 10057.5 31 11938.0 32 12704.5 33 13471.0 34 15710.5 35 17950.0 36 20445.0 37 22940.0 38 25122.5 39 27305.0 40 32322.5 41 37340.0 42 46837.5 43 56335.0 44 68614.0 45 80893.0 46 98949.5 47 117006.0 48 135672.0 49 154338.0 50 147368.0 51 140398.0 52 114185.0 53 87972.0 54 72861.0 55 57750.0 56 46921.5 57 36093.0 58 30950.0 59 25807.0 60 22611.0 61 19415.0 62 16993.0 63 14571.0 64 12121.0 65 9671.0 66 7895.0 67 6119.0 68 4963.5 69 3808.0 70 3146.5 71 2485.0 72 2207.5 73 1930.0 74 1747.5 75 1134.0 76 703.0 77 482.5 78 262.0 79 221.5 80 181.0 81 130.5 82 80.0 83 75.5 84 71.0 85 47.0 86 23.0 87 13.0 88 3.0 89 3.0 90 3.0 91 1.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1015911.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.459608153063677 #Duplication Level Percentage of deduplicated Percentage of total 1 65.98247857014424 19.43817963644371 2 13.642886105601198 8.038281574957763 3 6.320009836317932 5.585550399043031 4 3.530960930014851 4.160829016080592 5 2.0599253963696595 3.034229750079728 6 1.3943205267525494 2.4645681814742066 7 0.9251205951091597 1.9077583158371447 8 0.6885324069894369 1.6227115928475657 9 0.5139683706982056 1.3627176123453937 >10 4.193805094362738 28.7974003860114 >50 0.6504116644237479 12.300329211391501 >100 0.08331873736155071 4.885966677107836 >500 0.008256811810603925 1.5920217732948982 >1k 0.004879025160811411 2.334353475906326 >5k 0.0011259288832641717 2.4751023971789428 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCTGCT 9021 0.8879714856911679 No Hit CCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCTGC 7186 0.7073454269123969 No Hit GCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCTGC 6179 0.6082225706779433 No Hit TCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCTGC 2464 0.24254093124299272 No Hit ACTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCTGC 2160 0.2126170501156105 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCC 2035 0.20031282267836456 No Hit CGCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCTG 1897 0.18672895558764496 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1794 0.17659027217935427 No Hit ACCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCTG 1487 0.14637108959347817 No Hit GCCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCTG 1485 0.14617422195448224 No Hit GGCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCTG 1446 0.1423353029940615 No Hit AAAACTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTC 1441 0.14184313389657166 No Hit TGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCTGCTT 1312 0.12914517118133378 Illumina Single End Adapter 1 (95% over 21bp) AGCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCTG 1260 0.12402661256743948 No Hit CGTTCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTC 1186 0.11674250992458986 No Hit GGCCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCT 1146 0.11280515714467113 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.9686763899593566E-4 0.0 0.0 0.9350228514111965 0.0 2 1.9686763899593566E-4 0.0 0.0 2.8115651863204554 0.0 3 1.9686763899593566E-4 0.0 0.0 3.9859790867507097 0.0 4 1.9686763899593566E-4 0.0 0.0 5.322415054074619 0.0 5 1.9686763899593566E-4 0.0 0.0 8.479975115930431 0.0 6 1.9686763899593566E-4 0.0 0.0 10.503479143350155 0.0 7 1.9686763899593566E-4 0.0 0.0 12.167207560504808 0.0 8 1.9686763899593566E-4 0.0 0.0 15.131935769964102 0.0 9 1.9686763899593566E-4 0.0 0.0 16.08182212811949 0.0 10 1.9686763899593566E-4 0.0 0.0 18.18308887294261 0.0 11 1.9686763899593566E-4 0.0 0.0 21.430617445819564 0.0 12 2.953014584939035E-4 0.0 0.0 23.920008740923173 0.0 13 2.953014584939035E-4 0.0 0.0 24.883872701447274 0.0 14 2.953014584939035E-4 0.0 0.0 25.269241104781816 0.0 15 2.953014584939035E-4 0.0 0.0 25.967727487939396 0.0 16 2.953014584939035E-4 0.0 0.0 27.457228044582646 0.0 17 2.953014584939035E-4 0.0 0.0 29.18464314295248 0.0 18 8.859043754817105E-4 0.0 0.0 31.291028446389497 0.0 19 8.859043754817105E-4 0.0 0.0 32.52755408692297 0.0 20 8.859043754817105E-4 0.0 0.0 33.577350771868794 0.0 21 9.843381949796784E-4 0.0 0.0 34.70904439463693 0.0 22 9.843381949796784E-4 0.0 0.0 35.761498792709205 0.0 23 0.0010827720144776462 0.0 0.0 36.80696438959712 0.0 24 0.0010827720144776462 0.0 0.0 37.59571458523433 0.0 25 0.0010827720144776462 0.0 0.0 38.365565487527945 0.0 26 0.001181205833975614 0.0 0.0 39.02467834288633 0.0 27 0.001181205833975614 0.0 0.0 39.64510670718202 0.0 28 0.001181205833975614 0.0 0.0 40.27764243127597 0.0 29 0.001181205833975614 0.0 0.0 40.941480109970264 0.0 30 0.001181205833975614 0.0 0.0 41.62844973624658 0.0 31 0.001181205833975614 0.0 0.0 42.27230534958279 0.0 32 0.001181205833975614 0.0 0.0 42.94323026328094 0.0 33 0.001181205833975614 0.0 0.0 43.61159589767214 0.0 34 0.0013780734729715496 0.0 0.0 44.2914782889446 0.0 35 0.0013780734729715496 0.0 0.0 44.977266709386946 0.0 36 0.0013780734729715496 0.0 0.0 45.63775763821831 0.0 37 0.0013780734729715496 0.0 0.0 46.29263783933829 0.0 38 0.0013780734729715496 0.0 0.0 46.948797680111745 0.0 39 0.0013780734729715496 0.0 0.0 47.64255923993342 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACCA 20 7.032899E-4 45.000004 13 CTATACG 20 7.032899E-4 45.000004 1 TTGTCGT 20 7.032899E-4 45.000004 42 CCGTGCA 20 7.032899E-4 45.000004 45 GCTTGCG 20 7.032899E-4 45.000004 1 CGTTAGT 70 0.0 45.000004 28 CGAGGTT 20 7.032899E-4 45.000004 37 CACTACG 20 7.032899E-4 45.000004 1 CTCGCAC 20 7.032899E-4 45.000004 38 ACGTCAT 20 7.032899E-4 45.000004 10 CAATCGT 20 7.032899E-4 45.000004 15 TGCACGT 20 7.032899E-4 45.000004 28 AATCGTC 20 7.032899E-4 45.000004 12 AGTCGAC 20 7.032899E-4 45.000004 12 ACGAACG 20 7.032899E-4 45.000004 1 CGCCTAA 25 3.8904847E-5 45.0 14 AATTGCG 45 3.8380676E-10 45.0 1 TCCACCG 25 3.8904847E-5 45.0 31 TATTACG 25 3.8904847E-5 45.0 1 CACGTTA 45 3.8380676E-10 45.0 16 >>END_MODULE