##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935066.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1900311 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.70746367305141 33.0 31.0 34.0 30.0 34.0 2 32.0274712928568 33.0 31.0 34.0 30.0 34.0 3 32.098061843561396 33.0 31.0 34.0 30.0 34.0 4 35.69908925433784 37.0 35.0 37.0 33.0 37.0 5 30.261608757724392 37.0 35.0 37.0 0.0 37.0 6 32.70393267207315 37.0 35.0 37.0 17.0 37.0 7 34.87482838335409 37.0 35.0 37.0 32.0 37.0 8 35.38198221238524 37.0 35.0 37.0 33.0 37.0 9 37.17169031805847 39.0 37.0 39.0 34.0 39.0 10 37.16986061755155 39.0 37.0 39.0 34.0 39.0 11 37.132894036818186 39.0 37.0 39.0 34.0 39.0 12 37.0552262234971 39.0 37.0 39.0 33.0 39.0 13 37.00729617415254 39.0 37.0 39.0 33.0 39.0 14 38.101952785622984 40.0 37.0 41.0 33.0 41.0 15 38.19015150677968 40.0 37.0 41.0 33.0 41.0 16 38.266993139544 40.0 37.0 41.0 34.0 41.0 17 38.230119701459394 40.0 37.0 41.0 34.0 41.0 18 38.1743204138691 40.0 37.0 41.0 34.0 41.0 19 38.153888495093696 40.0 37.0 41.0 34.0 41.0 20 38.05492206275709 40.0 37.0 41.0 34.0 41.0 21 38.008001848118546 40.0 37.0 41.0 33.0 41.0 22 37.98666270941967 40.0 37.0 41.0 33.0 41.0 23 37.894232575615256 40.0 36.0 41.0 33.0 41.0 24 37.872250384279205 40.0 36.0 41.0 33.0 41.0 25 37.805699698628274 40.0 36.0 41.0 33.0 41.0 26 37.73412983453761 39.0 36.0 41.0 33.0 41.0 27 37.66445281851234 39.0 36.0 41.0 33.0 41.0 28 37.58846420401713 39.0 36.0 41.0 33.0 41.0 29 37.62043949648242 39.0 36.0 41.0 33.0 41.0 30 37.4580913334712 39.0 36.0 41.0 33.0 41.0 31 32.9110682409353 38.0 33.0 40.0 9.0 41.0 32 33.79573185652243 38.0 33.0 40.0 16.0 41.0 33 35.69157837848647 38.0 34.0 40.0 28.0 41.0 34 36.46009258484532 38.0 35.0 40.0 30.0 41.0 35 36.67184213531364 39.0 35.0 40.0 31.0 41.0 36 36.80486930823428 39.0 35.0 40.0 31.0 41.0 37 36.85684395869939 39.0 35.0 41.0 31.0 41.0 38 36.82184916047952 39.0 35.0 41.0 31.0 41.0 39 36.83882322419856 39.0 35.0 41.0 31.0 41.0 40 36.76599935484244 39.0 35.0 41.0 31.0 41.0 41 36.636817868233145 39.0 35.0 41.0 31.0 41.0 42 36.58420647988671 39.0 35.0 41.0 31.0 41.0 43 36.56858219523015 39.0 35.0 41.0 31.0 41.0 44 36.49741594928409 39.0 35.0 41.0 31.0 41.0 45 36.47820014723906 39.0 35.0 40.0 31.0 41.0 46 36.374065087240986 39.0 35.0 40.0 30.0 41.0 47 36.233078690803765 39.0 35.0 40.0 30.0 41.0 48 36.256609576011506 39.0 35.0 40.0 30.0 41.0 49 36.26438251423057 39.0 35.0 40.0 30.0 41.0 50 36.05746480444517 39.0 35.0 40.0 29.0 41.0 51 35.36530494219104 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 13.0 10 20.0 11 15.0 12 23.0 13 27.0 14 35.0 15 58.0 16 121.0 17 247.0 18 572.0 19 976.0 20 1784.0 21 3057.0 22 4938.0 23 7684.0 24 10384.0 25 12496.0 26 14250.0 27 16749.0 28 19874.0 29 25064.0 30 32696.0 31 45020.0 32 63504.0 33 78006.0 34 129110.0 35 180416.0 36 230597.0 37 227409.0 38 357531.0 39 437348.0 40 284.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.06521985085599 21.471801194646563 23.66917836080515 12.793800593692294 2 30.468381228125292 27.235173611056297 23.81836446771081 18.4780806931076 3 29.462335375630623 27.185550154685206 26.17271593965409 17.179398530030085 4 27.396410377038283 25.746996149577623 28.10655729509538 18.750036178288713 5 22.262356003833055 37.972731831789645 21.154958319980256 18.609953844397047 6 24.079321753123565 33.087899822713226 25.508508870390163 17.32426955377304 7 71.02242738162332 7.551290288800096 13.9993401080139 7.426942221562681 8 68.18078725008696 8.239388184355088 13.739698396736113 9.84012616882184 9 61.527665734713956 9.145450402591997 16.931544363001635 12.395339499692419 10 33.651860142892396 26.27585695183578 23.07853819716878 16.993744708103044 11 25.65590579647226 25.320907998743365 27.37436135453618 21.648824850248197 12 23.01333834303964 21.735547497225454 33.16593968039968 22.085174479335222 13 21.60804205206411 24.340647399294117 34.935544760831256 19.11576578781052 14 17.034317014425536 29.589630328930372 29.748393815538616 23.627658841105482 15 15.258818161869295 27.089671111728553 36.591378990070574 21.06013173633158 16 16.33511567317139 28.40087754057099 30.645720621519317 24.618286164738297 17 15.969280817718785 28.529277576144114 28.452500669627234 27.04894093650987 18 16.69074167333663 27.247540007925018 31.949822950032914 24.11189536870544 19 18.262747518695623 28.481653792458182 28.853908649689448 24.401690039156748 20 20.021617514185834 29.112603147590054 29.69824412951354 21.167535208710575 21 19.51685803008034 29.89147565845801 30.144223761268552 20.447442550193102 22 16.891656155229327 27.214334916758364 27.762981954006477 28.131026974005835 23 17.65842538405556 28.196489942961968 28.96173310579163 25.183351567190844 24 20.96683121867947 24.834619175492854 28.341834573393516 25.856715032434163 25 17.727308845762614 29.360720429445497 25.000434139464538 27.91153658532735 26 16.56428868748326 27.952056268684444 26.854920063084407 28.62873498074789 27 20.51527355259218 27.422406121945304 25.397474413398648 26.664845912063868 28 15.488359536938953 28.22453798351954 28.04630399971373 28.240798479827777 29 17.216287228774657 24.570978118844756 27.33642019648363 30.87631445589696 30 18.82602374032461 26.518554068255145 26.852499406676067 27.802922784744183 31 20.81617166874264 31.59719645889541 22.305717327321688 25.28091454504026 32 19.38682668257985 28.374145074148387 25.849663555070723 26.389364688201038 33 17.80734837613422 25.743312541999703 27.624057325353586 28.82528175651249 34 17.762303117752833 27.932796263348475 27.66768176366921 26.637218855229488 35 20.144913122115273 23.39822271196662 26.399257805696013 30.05760636022209 36 18.503444962429832 25.731261882923373 26.1946597162254 29.570633438421396 37 17.84050084433548 28.248902416499195 29.204851205934183 24.705745533231138 38 19.865274683985938 26.648374923894036 28.19848961564712 25.287860776472904 39 21.062973376463116 23.29697612653929 30.476958771485297 25.1630917255123 40 22.284352403369763 22.58456642097004 31.51915660120896 23.611924574451233 41 19.607895760220302 25.88671012271149 24.566663035682055 29.93873108138615 42 21.50269087533567 22.504421644667634 27.47744974375247 28.515437736244227 43 21.637405666756653 21.369870510669042 28.76123960762212 28.231484214952186 44 18.930796064433665 22.72827973947422 29.09934216030955 29.241582035782564 45 19.302314200149347 20.50411748392763 29.65214641182417 30.541421904098854 46 22.717860392325257 22.28540486267774 29.556898844452302 25.4398359005447 47 17.556757814905033 22.29208797928339 33.86045757773333 26.290696628078248 48 17.85691920953991 21.173271111939044 31.125431574094975 29.844378104426067 49 20.377138268420275 18.620004830788222 34.54566121019138 26.457195690600116 50 19.391983733188937 18.32684229055139 33.41616188087107 28.865012095388597 51 17.902332828679096 18.379254764088614 29.090238387295553 34.628174019936736 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2765.0 1 3364.0 2 3963.0 3 4900.5 4 5838.0 5 5033.0 6 4228.0 7 4366.5 8 4505.0 9 5026.5 10 5548.0 11 6139.5 12 6731.0 13 7249.0 14 7767.0 15 7737.0 16 7707.0 17 7671.0 18 7635.0 19 7484.5 20 7334.0 21 7074.5 22 6815.0 23 7530.0 24 8245.0 25 10028.0 26 13711.5 27 15612.0 28 17287.5 29 18963.0 30 20324.0 31 21685.0 32 23479.0 33 25273.0 34 29239.0 35 33205.0 36 36440.0 37 39675.0 38 45135.5 39 50596.0 40 57752.5 41 64909.0 42 79231.0 43 93553.0 44 114674.5 45 135796.0 46 183392.0 47 230988.0 48 256512.5 49 282037.0 50 270538.5 51 259040.0 52 207645.0 53 156250.0 54 127840.0 55 99430.0 56 84249.5 57 69069.0 58 62522.5 59 55976.0 60 51771.0 61 47566.0 62 41775.5 63 35985.0 64 30675.0 65 25365.0 66 20783.5 67 16202.0 68 13772.5 69 11343.0 70 9918.5 71 8494.0 72 6916.0 73 5338.0 74 4217.5 75 2532.5 76 1968.0 77 1536.5 78 1105.0 79 796.0 80 487.0 81 364.5 82 242.0 83 172.0 84 102.0 85 64.5 86 27.0 87 32.0 88 37.0 89 20.0 90 3.0 91 2.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1900311.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.39658810228369 #Duplication Level Percentage of deduplicated Percentage of total 1 65.96659055887906 20.71125872289122 2 14.061090730887798 8.829405478930466 3 6.510336111540267 6.13207023904359 4 3.4568080660252924 4.341279159905919 5 2.0384661229571552 3.2000440611472487 6 1.315622029598693 2.4783625776960383 7 0.8903239215173473 1.9567193409043073 8 0.6516149294842727 1.6366788433853072 9 0.49011013187174274 1.3849007341619743 >10 4.253914575221033 29.139026888553826 >50 0.2700675636507133 5.434311591499533 >100 0.07710654775217285 4.508870731372229 >500 0.009706955740557254 2.096612694204668 >1k 0.0069597041158712385 4.129167174390411 >5k 7.326004332496042E-4 1.4907047937402103 >10k+ 5.494503249372032E-4 2.5305869681730897 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTGC 15563 0.81897121050186 Illumina PCR Primer Index 10 (95% over 23bp) CTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTGCT 15431 0.8120249790692156 Illumina PCR Primer Index 10 (95% over 24bp) CCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTGC 13014 0.6848352717002638 Illumina PCR Primer Index 10 (95% over 23bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGC 7684 0.4043548661245449 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCG 7177 0.3776750226673423 No Hit GAATCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTC 5993 0.31536943163513764 No Hit TCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTGC 5070 0.26679843457202534 Illumina PCR Primer Index 10 (95% over 23bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCC 4821 0.2536953161877188 No Hit TGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTGCTT 3890 0.2047033354014159 Illumina PCR Primer Index 10 (96% over 25bp) ACTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTGC 3845 0.2023353019584689 Illumina PCR Primer Index 10 (95% over 23bp) GCCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTG 3200 0.168393489276229 Illumina PCR Primer Index 10 (95% over 22bp) CGCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTG 2769 0.14571299118933692 Illumina PCR Primer Index 10 (95% over 22bp) AGCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTG 2746 0.144502662985164 Illumina PCR Primer Index 10 (95% over 22bp) GGCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTG 2745 0.1444500400197652 Illumina PCR Primer Index 10 (95% over 22bp) CGTTCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTC 2618 0.13776692341411484 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCCATTAGCT 2543 0.13382020100920325 No Hit ACCTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTCTG 2487 0.13087331494686924 Illumina PCR Primer Index 10 (95% over 22bp) AAAACTGTCTCTTATACACATCTGACGCCCATTAGCTCGTATGCCGTCTTC 2200 0.11577052387740742 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2106 0.11082396512991821 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0524593079764312E-4 0.0 0.0 0.862016796198096 0.0 2 1.0524593079764312E-4 0.0 0.0 2.970303281936483 0.0 3 1.0524593079764312E-4 0.0 0.0 4.179210666043611 0.0 4 1.0524593079764312E-4 0.0 0.0 5.576245151451525 0.0 5 1.0524593079764312E-4 0.0 0.0 9.20744025583181 0.0 6 1.0524593079764312E-4 0.0 0.0 11.562633695221466 0.0 7 1.0524593079764312E-4 0.0 0.0 13.54157293200955 0.0 8 1.578688961964647E-4 0.0 0.0 16.695477740222522 0.0 9 1.578688961964647E-4 0.0 0.0 17.809032311026986 0.0 10 1.578688961964647E-4 0.0 0.0 20.32946186176894 0.0 11 1.578688961964647E-4 0.0 0.0 23.516413892252373 0.0 12 1.578688961964647E-4 0.0 0.0 26.650795580302383 0.0 13 1.578688961964647E-4 0.0 0.0 27.806922130114494 0.0 14 1.578688961964647E-4 0.0 0.0 28.327784241632028 0.0 15 2.1049186159528623E-4 0.0 0.0 29.237845805239246 0.0 16 2.1049186159528623E-4 0.0 0.0 30.797695745591117 0.0 17 2.1049186159528623E-4 0.0 0.0 32.59945345788137 0.0 18 2.1049186159528623E-4 0.0 0.0 34.60338860323389 0.0 19 2.1049186159528623E-4 0.0 0.0 35.938433235401995 0.0 20 2.1049186159528623E-4 0.0 0.0 36.98447254159977 0.0 21 2.1049186159528623E-4 0.0 0.0 38.094869734480305 0.0 22 2.1049186159528623E-4 0.0 0.0 39.18479659382069 0.0 23 2.1049186159528623E-4 0.0 0.0 40.18694834687585 0.0 24 2.1049186159528623E-4 0.0 0.0 40.996921030294516 0.0 25 2.1049186159528623E-4 0.0 0.0 41.72795926561494 0.0 26 2.1049186159528623E-4 0.0 0.0 42.37559010077824 0.0 27 2.1049186159528623E-4 0.0 0.0 42.99501502648777 0.0 28 2.1049186159528623E-4 0.0 0.0 43.6456979936442 0.0 29 2.1049186159528623E-4 0.0 0.0 44.336163922642136 0.0 30 2.1049186159528623E-4 0.0 0.0 45.054730515163044 0.0 31 2.631148269941078E-4 0.0 0.0 45.7088865980358 0.0 32 2.631148269941078E-4 0.0 0.0 46.40850892301313 0.0 33 3.157377923929294E-4 0.0 0.0 47.08492452024958 0.0 34 3.6836075779175093E-4 0.0 0.0 47.73066092865852 0.0 35 3.6836075779175093E-4 0.0 0.0 48.40002504853153 0.0 36 3.6836075779175093E-4 0.0 0.0 49.08822819001732 0.0 37 3.6836075779175093E-4 0.0 0.0 49.75680296540935 0.0 38 4.2098372319057247E-4 0.0 0.0 50.40306560347227 0.0 39 4.2098372319057247E-4 0.0 0.0 51.039750861832616 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTACGG 75 0.0 45.000004 2 GATTACG 45 3.8562575E-10 45.000004 1 TCGTTAC 25 3.8917715E-5 45.0 20 GATCGAC 20 7.0344517E-4 45.0 9 ATGCGAA 80 0.0 45.0 26 CGGTAAT 25 3.8917715E-5 45.0 30 TTCGACA 25 3.8917715E-5 45.0 32 CGTAAGG 250 0.0 43.199997 2 ACGGGTC 135 0.0 41.666664 5 ACGTAAG 65 0.0 41.538464 1 TATTGCG 60 3.6379788E-12 41.249996 1 TACGGGT 140 0.0 40.178574 4 GAATGCG 135 0.0 40.0 1 CTACGAA 130 0.0 39.807693 11 CGTTATT 345 0.0 39.782608 1 TATACGC 250 0.0 39.6 26 CCCGTTA 495 0.0 39.545452 28 TATGGGA 1040 0.0 39.375004 4 GTACGAG 40 3.4598088E-7 39.375 1 CTACGGG 380 0.0 39.078945 3 >>END_MODULE