##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935063.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2870472 Sequences flagged as poor quality 0 Sequence length 51 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.057525730959924 33.0 31.0 34.0 30.0 34.0 2 32.378944299056045 34.0 31.0 34.0 30.0 34.0 3 32.44024397381337 34.0 31.0 34.0 30.0 34.0 4 35.94037113060152 37.0 35.0 37.0 35.0 37.0 5 30.428402715650947 37.0 35.0 37.0 0.0 37.0 6 32.89184461649513 37.0 35.0 37.0 17.0 37.0 7 35.08261428782444 37.0 35.0 37.0 32.0 37.0 8 35.65531940391685 37.0 35.0 37.0 35.0 37.0 9 37.550329353500054 39.0 37.0 39.0 35.0 39.0 10 37.435362895022145 39.0 37.0 39.0 35.0 39.0 11 37.303766767277295 39.0 37.0 39.0 34.0 39.0 12 37.06177416118325 39.0 37.0 39.0 34.0 39.0 13 36.9721373349052 39.0 37.0 39.0 33.0 39.0 14 37.95203053713814 40.0 37.0 41.0 33.0 41.0 15 38.12404266615386 40.0 37.0 41.0 33.0 41.0 16 38.27693738172677 40.0 37.0 41.0 33.0 41.0 17 38.30471817875248 40.0 37.0 41.0 34.0 41.0 18 38.26371412088326 40.0 37.0 41.0 34.0 41.0 19 38.25932703750463 40.0 37.0 41.0 34.0 41.0 20 38.17065834469035 40.0 37.0 41.0 34.0 41.0 21 38.119059861932115 40.0 37.0 41.0 34.0 41.0 22 38.15484909798806 40.0 36.0 41.0 34.0 41.0 23 38.10504544200396 40.0 36.0 41.0 34.0 41.0 24 38.0710743738312 40.0 36.0 41.0 34.0 41.0 25 37.99464234453428 40.0 36.0 41.0 34.0 41.0 26 37.92851872444671 40.0 36.0 41.0 34.0 41.0 27 37.89699742760076 40.0 36.0 41.0 34.0 41.0 28 37.84587099264511 40.0 36.0 41.0 34.0 41.0 29 37.803080120621274 40.0 36.0 41.0 33.0 41.0 30 37.68207737264115 40.0 35.0 41.0 33.0 41.0 31 33.07180003846057 38.0 33.0 41.0 9.0 41.0 32 33.95488372643941 38.0 33.0 41.0 16.0 41.0 33 35.88246114227904 38.0 34.0 41.0 29.0 41.0 34 36.69734106446605 38.0 35.0 41.0 31.0 41.0 35 36.8348532924202 39.0 35.0 41.0 31.0 41.0 36 36.97875053301338 39.0 35.0 41.0 32.0 41.0 37 37.120229704383114 39.0 35.0 41.0 32.0 41.0 38 37.09581281405985 39.0 35.0 41.0 32.0 41.0 39 37.071765200984366 39.0 35.0 41.0 32.0 41.0 40 37.02033602836049 39.0 35.0 41.0 32.0 41.0 41 36.921555409702655 39.0 35.0 41.0 32.0 41.0 42 36.83351553333389 39.0 35.0 41.0 32.0 41.0 43 36.84669280870881 39.0 35.0 41.0 32.0 41.0 44 36.795320421171155 39.0 35.0 41.0 32.0 41.0 45 36.75011322179767 39.0 35.0 41.0 32.0 41.0 46 36.709246423584695 39.0 35.0 41.0 32.0 41.0 47 36.608613496316984 38.0 35.0 41.0 32.0 41.0 48 36.579889997185134 38.0 35.0 40.0 32.0 41.0 49 36.54420074468589 38.0 35.0 40.0 32.0 41.0 50 36.35725901524209 38.0 35.0 40.0 31.0 41.0 51 35.73050494831512 37.0 34.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 14.0 10 35.0 11 26.0 12 36.0 13 54.0 14 70.0 15 101.0 16 192.0 17 329.0 18 574.0 19 1034.0 20 1717.0 21 2785.0 22 4531.0 23 7254.0 24 10167.0 25 13494.0 26 17221.0 27 21292.0 28 26367.0 29 33117.0 30 45337.0 31 65433.0 32 95980.0 33 116756.0 34 221222.0 35 270302.0 36 330911.0 37 344254.0 38 492611.0 39 746499.0 40 752.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.61542073916763 21.42145960664309 25.242329484488963 11.720790169700313 2 31.22702468444214 24.135194490662162 25.943398855658582 18.694381969237114 3 32.291936657107264 23.945190895434617 25.994609945681407 17.76826250177671 4 28.794219208548284 25.80202837721462 25.792587421162793 19.611164993074308 5 22.68090404644254 39.04389243302147 21.103637311215717 17.17156620932028 6 27.515091594692443 33.209346755516165 23.74327288334462 15.532288766446772 7 80.66412074390553 6.326485679010281 7.774157002750767 5.2352365743334195 8 82.06082483995664 4.9217689634317985 7.597496160910122 5.419910035701445 9 76.33608688745267 6.6136161579001636 10.13247995451619 6.91781700013099 10 44.07762904497936 23.69742676465752 16.639179897940128 15.585764292422988 11 32.68486855123478 23.687080034224337 23.305644507244804 20.32240690729608 12 28.56258482925456 21.405295017683503 28.883368310159447 21.14875184290249 13 26.578102834655766 22.477627372780503 30.952470534462623 19.991799258101107 14 21.195817273256804 24.807592618914242 32.05789849195533 21.938691615873626 15 20.46565860945517 23.76933131554671 34.08585765685922 21.679152418138898 16 25.736812621756975 23.844545426675474 28.272075115172697 22.14656683639485 17 25.850208606807524 23.711396592616126 26.473067843894665 23.965326956681686 18 26.022932813836885 22.474213300112318 29.377712097522636 22.125141788528158 19 25.40439342379929 25.198678126802836 26.496339278000274 22.900589171397595 20 24.964221911936434 27.387830294111907 26.953650828156483 20.69429696579517 21 23.628448561769634 26.121383521595053 29.758834087216318 20.491333829418995 22 23.15483307274901 22.830426494318704 29.815410148574866 24.199330284357416 23 22.3278959000471 24.57780462585944 29.594017987285714 23.500281486807744 24 23.026038923215417 24.981849674896672 28.424280048716728 23.567831353171186 25 24.06747043691769 26.341835071026647 25.468668567399366 24.122025924656292 26 21.8648361663169 25.874176790437254 26.419487805489826 25.84149923775602 27 22.704070968119527 24.31774286598162 28.420169226524415 24.55801693937443 28 20.032768130119365 25.581402640401997 27.515056757216232 26.8707724722624 29 22.012303203096913 26.29177361771862 26.613044823290387 25.082878355894085 30 25.018812237151245 24.607381643158337 26.69756054056615 23.67624557912427 31 26.00659403749627 26.346781992647898 24.221556594176846 23.42506737567898 32 24.78449537218966 26.006977249734536 24.891132886856237 24.317394491219563 33 24.866572466131007 25.937128109941497 24.88075131894685 24.315548104980643 34 21.616653985825327 25.360358853874903 27.32052429008191 25.702462870217857 35 21.383312570197514 27.623227120835875 26.29299292938583 24.70046737958078 36 23.657781716735087 28.938550872469754 23.967521717682665 23.436145693112493 37 22.508493376699022 27.10017725307894 25.435050402860576 24.956278967361463 38 22.30072266860642 26.610884899765612 25.723191168560433 25.36520126306754 39 22.1195677923352 25.95621904690239 26.0740742289073 25.85013893185511 40 23.443287375734723 24.20863189050442 27.6030562221126 24.745024511648257 41 20.84747734867297 25.154608719402244 25.17836787817474 28.819546053750045 42 21.673508746993527 25.235884551390853 27.25994191895967 25.830664782655955 43 21.89942978018946 24.035524471236787 28.330427887817756 25.734617860756 44 22.296960221176167 23.616499307430974 27.21597702398769 26.870563447405164 45 21.58718148095505 23.36058320722167 26.43708073097386 28.61515458084942 46 22.721733568555972 24.13791181380623 27.013292587421162 26.127062030216635 47 19.48101218196868 25.49629468603073 29.211781198353442 25.81091193364715 48 20.02813474578397 26.019518741168703 27.98052027680465 25.971826236242677 49 23.049832919464116 23.493035291756893 28.652848730104317 24.80428305867467 50 20.688200407459124 24.11579001641542 28.200797638855214 26.99521193727025 51 20.17615918218328 23.801904355799326 26.11504310092556 29.906893361091836 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1450.0 1 2274.5 2 3099.0 3 4618.0 4 6137.0 5 5004.5 6 3872.0 7 3950.5 8 4029.0 9 4425.0 10 4821.0 11 5159.0 12 5497.0 13 5630.5 14 5764.0 15 5883.5 16 6003.0 17 5858.0 18 5713.0 19 6037.0 20 6361.0 21 6792.0 22 7223.0 23 8942.0 24 10661.0 25 11774.0 26 16801.5 27 20716.0 28 23669.0 29 26622.0 30 31486.5 31 36351.0 32 40950.5 33 45550.0 34 53495.5 35 61441.0 36 68599.5 37 75758.0 38 81619.0 39 87480.0 40 97797.0 41 108114.0 42 120417.5 43 132721.0 44 147556.5 45 162392.0 46 194853.5 47 227315.0 48 258486.0 49 289657.0 50 289315.5 51 288974.0 52 257626.0 53 226278.0 54 207939.0 55 189600.0 56 176969.0 57 164338.0 58 155798.5 59 147259.0 60 135406.0 61 123553.0 62 113300.5 63 103048.0 64 92641.0 65 82234.0 66 69557.0 67 56880.0 68 50210.0 69 43540.0 70 36633.5 71 29727.0 72 25720.0 73 21713.0 74 18382.5 75 12369.0 76 9686.0 77 7775.0 78 5864.0 79 4283.0 80 2702.0 81 2126.0 82 1550.0 83 1061.0 84 572.0 85 354.5 86 137.0 87 109.0 88 81.0 89 62.5 90 44.0 91 24.0 92 4.0 93 3.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2870472.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.97563236476055 #Duplication Level Percentage of deduplicated Percentage of total 1 67.10120676964104 16.087938647406954 2 13.196550282420752 6.327912761087939 3 5.815671578164921 4.183032111368068 4 3.0192828029537644 2.8955685795545287 5 1.7974202167321787 2.1547143160679476 6 1.1418713305202914 1.6426252337048692 7 0.7817587854371776 1.3120212866294443 8 0.5767928953625416 1.106317952785448 9 0.4691973195320905 1.0124372195669238 >10 4.086722610154942 23.117387818249163 >50 1.7857905533214768 29.844070812651108 >100 0.21762894149372544 7.257224715858844 >500 0.00651994468716152 1.047264479049892 >1k 0.0030969737264017225 1.270450069013842 >5k 4.88995851537114E-4 0.7410339970051516 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGC 6881 0.23971667377351183 No Hit CTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGCT 6745 0.2349787770094953 No Hit CCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGC 5336 0.18589277303523602 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 3915 0.13638871934650468 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.24647514415747654 0.0 2 0.0 0.0 0.0 0.8508008439030236 0.0 3 3.483747620600375E-5 0.0 0.0 1.2289616481191943 0.0 4 3.483747620600375E-5 0.0 0.0 1.707976945951746 0.0 5 6.96749524120075E-5 0.0 0.0 2.972403144848652 0.0 6 6.96749524120075E-5 0.0 0.0 3.8926002413540353 0.0 7 6.96749524120075E-5 0.0 0.0 4.679787853704896 0.0 8 6.96749524120075E-5 0.0 0.0 6.072276615135072 0.0 9 6.96749524120075E-5 0.0 0.0 6.573831760072908 0.0 10 6.96749524120075E-5 0.0 0.0 7.646059602741292 0.0 11 6.96749524120075E-5 0.0 0.0 9.303278345860889 0.0 12 6.96749524120075E-5 0.0 0.0 10.652115749604944 0.0 13 6.96749524120075E-5 0.0 0.0 11.193072080131769 0.0 14 6.96749524120075E-5 0.0 0.0 11.439651736717863 0.0 15 6.96749524120075E-5 0.0 0.0 11.87442343976879 0.0 16 6.96749524120075E-5 0.0 0.0 12.678472390603357 0.0 17 6.96749524120075E-5 0.0 0.0 13.62420535716774 0.0 18 6.96749524120075E-5 0.0 0.0 14.643933123193676 0.0 19 6.96749524120075E-5 0.0 0.0 15.326712819355144 0.0 20 6.96749524120075E-5 0.0 0.0 15.962740622448155 0.0 21 6.96749524120075E-5 0.0 0.0 16.687847852199916 0.0 22 6.96749524120075E-5 0.0 0.0 17.44545844725188 0.0 23 6.96749524120075E-5 0.0 0.0 18.121131298267322 0.0 24 6.96749524120075E-5 0.0 0.0 18.69462583157056 0.0 25 6.96749524120075E-5 0.0 0.0 19.223458720377693 0.0 26 6.96749524120075E-5 0.0 0.0 19.71508518459682 0.0 27 6.96749524120075E-5 0.0 0.0 20.261894211126254 0.0 28 6.96749524120075E-5 0.0 0.0 20.77146197559147 0.0 29 6.96749524120075E-5 0.0 0.0 21.35084404237352 0.0 30 6.96749524120075E-5 0.0 0.0 22.01780752433746 0.0 31 6.96749524120075E-5 0.0 0.0 22.534447296472496 0.0 32 6.96749524120075E-5 0.0 0.0 23.095260988436745 0.0 33 6.96749524120075E-5 0.0 0.0 23.69098183155941 0.0 34 6.96749524120075E-5 0.0 0.0 24.29917449116382 0.0 35 6.96749524120075E-5 0.0 0.0 24.97244355632105 0.0 36 6.96749524120075E-5 0.0 0.0 25.559246005534977 0.0 37 6.96749524120075E-5 0.0 0.0 26.17973629424011 0.0 38 6.96749524120075E-5 0.0 0.0 26.893416831796305 0.0 39 6.96749524120075E-5 0.0 0.0 28.04329740892787 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATCCGC 30 2.166642E-6 45.000004 15 CGTATCA 20 7.035054E-4 45.0 45 CGTATGG 435 0.0 40.86207 2 CGAGATA 1920 0.0 37.382816 19 TATGGGA 1615 0.0 37.198143 4 TTACACG 1650 0.0 36.954548 34 TCGATAG 110 0.0 36.81818 1 TAACACG 55 2.752131E-9 36.81818 1 TACACGC 1680 0.0 36.562496 35 ACGGGTA 310 0.0 36.29032 5 CGAATAT 255 0.0 36.17647 14 TTAGACG 125 0.0 36.0 1 CGCATCG 50 4.883259E-8 36.0 21 CGTCGTT 25 0.0021076333 36.0 18 GCGTATG 300 0.0 36.0 1 TCGCGAT 25 0.0021076333 36.0 25 ACACGCG 1665 0.0 35.67568 36 TATTACG 95 0.0 35.526314 1 GTCTTAC 1685 0.0 35.385754 31 TACGCAT 250 0.0 35.1 28 >>END_MODULE