##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935061.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1557332 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.82549449956721 33.0 31.0 34.0 30.0 34.0 2 32.15371930969119 34.0 31.0 34.0 30.0 34.0 3 32.2224708668415 34.0 31.0 34.0 30.0 34.0 4 35.776312950610404 37.0 35.0 37.0 35.0 37.0 5 30.304663360156987 37.0 35.0 37.0 0.0 37.0 6 32.76633434617666 37.0 35.0 37.0 17.0 37.0 7 34.9562097227823 37.0 35.0 37.0 32.0 37.0 8 35.50408133911073 37.0 35.0 37.0 33.0 37.0 9 37.35138043782572 39.0 37.0 39.0 34.0 39.0 10 37.28220379469503 39.0 37.0 39.0 34.0 39.0 11 37.16408126205587 39.0 37.0 39.0 34.0 39.0 12 37.02661795943318 39.0 37.0 39.0 33.0 39.0 13 36.982112998384416 39.0 37.0 39.0 33.0 39.0 14 38.11298746831119 40.0 37.0 41.0 33.0 41.0 15 38.20538716214654 40.0 37.0 41.0 33.0 41.0 16 38.28676801093152 40.0 37.0 41.0 34.0 41.0 17 38.261595472256396 40.0 37.0 41.0 34.0 41.0 18 38.19742418443852 40.0 37.0 41.0 34.0 41.0 19 38.17610053604498 40.0 37.0 41.0 34.0 41.0 20 38.09356450647646 40.0 37.0 41.0 34.0 41.0 21 38.04207773294326 40.0 37.0 41.0 34.0 41.0 22 38.02703983479438 40.0 36.0 41.0 34.0 41.0 23 37.92927262780191 40.0 36.0 41.0 33.0 41.0 24 37.91321054213231 40.0 36.0 41.0 33.0 41.0 25 37.8588040315103 40.0 36.0 41.0 33.0 41.0 26 37.817195048968365 40.0 36.0 41.0 33.0 41.0 27 37.773534480765825 40.0 36.0 41.0 33.0 41.0 28 37.70561126336581 40.0 36.0 41.0 33.0 41.0 29 37.71647086170451 40.0 36.0 41.0 33.0 41.0 30 37.5786916341538 40.0 36.0 41.0 33.0 41.0 31 33.02784891082955 38.0 33.0 41.0 9.0 41.0 32 33.892599009074495 38.0 33.0 41.0 16.0 41.0 33 35.8017802241269 38.0 34.0 40.0 29.0 41.0 34 36.64660136695323 38.0 35.0 40.0 31.0 41.0 35 36.789597850683094 39.0 35.0 40.0 31.0 41.0 36 36.918201128596856 39.0 35.0 40.0 31.0 41.0 37 37.037318953184034 39.0 35.0 41.0 32.0 41.0 38 36.99258796454449 39.0 35.0 41.0 32.0 41.0 39 36.99224699678681 39.0 35.0 41.0 32.0 41.0 40 36.99440774349978 39.0 35.0 41.0 32.0 41.0 41 36.887600075000066 39.0 35.0 41.0 32.0 41.0 42 36.77470764101682 39.0 35.0 41.0 31.0 41.0 43 36.720846935656624 39.0 35.0 41.0 31.0 41.0 44 36.655530098912756 39.0 35.0 41.0 31.0 41.0 45 36.63886120621679 39.0 35.0 41.0 31.0 41.0 46 36.56733760046028 39.0 35.0 41.0 31.0 41.0 47 36.43630324169798 39.0 35.0 40.0 31.0 41.0 48 36.43121376816247 39.0 35.0 40.0 31.0 41.0 49 36.413536098917895 39.0 35.0 40.0 31.0 41.0 50 36.21895267033619 38.0 35.0 40.0 31.0 41.0 51 35.575012264565295 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 8.0 10 10.0 11 9.0 12 17.0 13 22.0 14 23.0 15 52.0 16 113.0 17 191.0 18 371.0 19 721.0 20 1296.0 21 2165.0 22 3523.0 23 5342.0 24 7486.0 25 9115.0 26 10579.0 27 12249.0 28 14883.0 29 19099.0 30 25070.0 31 34692.0 32 51933.0 33 62540.0 34 108736.0 35 154197.0 36 186495.0 37 183802.0 38 275841.0 39 386515.0 40 235.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.682140994983726 21.46401666439783 25.79565564696545 12.05818669365299 2 30.284037058250906 25.92921740515189 25.803296920630924 17.98344861596628 3 30.414452409633913 25.893900594092973 26.460574880629178 17.231072115643933 4 27.078940136078884 26.14753950987972 27.71759650479153 19.05592384924987 5 22.22461234983934 38.863903136903375 21.26842574351519 17.643058769742098 6 25.75321126131101 33.874408282883806 24.20402329111583 16.168357164689354 7 75.7868585503926 6.979051351927527 10.927535040697808 6.306555056982069 8 75.32054821964745 6.511071499205051 10.470150231293006 7.698230049854494 9 69.55909208826377 7.784916767908191 13.229870059820255 9.426121084007777 10 40.69697405562847 22.861406559423425 19.18524759010924 17.256371794838866 11 28.411282886372334 24.59250821276388 25.460595428591976 21.53561347227181 12 24.481806063190124 22.137797207018156 30.556811264393207 22.823585465398516 13 23.166929081274898 23.526775279773357 33.55000732021175 19.756288318739998 14 19.03730225796426 28.53431381362484 29.831660814778093 22.5967231136328 15 17.791967287643224 25.34032563384044 35.03389129613981 21.833815782376526 16 19.19038458080872 26.727762609385795 30.025839063218374 24.056013746587112 17 19.60571027886154 25.78268474544927 28.211325523395143 26.40027945229405 18 20.207444526921684 24.984332178366593 31.069482936201144 23.738740358510583 19 20.86530039837363 26.7129937611248 29.016741452689597 23.404964387811976 20 22.445246100381937 27.01928683158119 28.69856909124066 21.836897976796212 21 21.340472038075376 28.90180128578877 28.930696858473336 20.827029817662517 22 20.26459354845338 25.374358197224485 27.951393794001532 26.409654460320596 23 19.584905466528653 26.924059866489614 27.89064887898021 25.600385788001528 24 21.561105788617972 24.907598379793132 28.064150739855087 25.467145091733812 25 20.075102804026372 27.960190890574392 26.179453064600228 25.785253240799005 26 20.567611787338862 26.902677142703034 27.433649343877864 25.096061726080244 27 21.94419687003157 25.863977623268514 26.749980094161042 25.441845412538882 28 18.27651393537152 24.983304780226696 30.558288149219305 26.181893135182477 29 21.876452805182193 23.112284342709195 28.500473887392026 26.510788964716582 30 22.047257745939852 23.782083717537432 27.508970470008965 26.661688066513754 31 24.48655777958714 25.60475223009609 25.88869939100975 24.01999059930702 32 23.99565410586824 24.584995363865893 27.540370325659524 23.87898020460634 33 21.122149933347544 22.893898025597625 27.960897226795574 28.023054814259257 34 21.986641255686006 21.454834293522513 31.94238608081 24.61613836998148 35 23.32065352795679 21.800810617132377 28.61554247906034 26.262993375850492 36 22.875469071463247 21.847878294416347 30.85604097263782 24.420611661482585 37 20.804876545271014 22.19597362668975 34.10223382040567 22.896916007633568 38 21.23111834856023 23.223050704666697 30.465180192791262 25.08065075398181 39 21.762732673572494 21.162218460803476 32.64223685123018 24.43281201439385 40 23.28437353114172 20.087367369321377 31.345660398681847 25.282598700855054 41 22.445824011835626 21.653892683127296 28.888637747121358 27.01164555791572 42 24.216287856410837 20.20834350029409 31.170296378678408 24.405072264616663 43 22.382253751929582 19.669858450221277 32.27596941435738 25.671918383491764 44 20.79961112980405 20.613780491250424 30.571580112654207 28.015028266291324 45 21.44719301985704 19.031523143427346 30.43904575260766 29.08223808410795 46 24.59507670811362 20.223882897160014 30.223613205148293 24.957427189578073 47 19.58041059966661 20.276537051829667 34.80529521001302 25.3377571384907 48 20.265942008511995 19.39329571343811 33.41021696080219 26.9305453172477 49 22.278807601718835 17.53678727464664 35.68102369950659 24.50338142412793 50 21.21249675727462 17.78965564182846 33.507883996476025 27.489963604420893 51 19.99329622713718 17.882378323954047 30.31492321483152 31.809402234077254 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1944.0 1 2290.5 2 2637.0 3 3202.5 4 3768.0 5 3276.5 6 2785.0 7 2856.0 8 2927.0 9 3267.0 10 3607.0 11 3924.0 12 4241.0 13 4407.0 14 4573.0 15 4560.0 16 4547.0 17 4557.0 18 4567.0 19 4674.0 20 4781.0 21 5095.5 22 5410.0 23 5511.0 24 5612.0 25 6402.0 26 7939.0 27 8686.0 28 10396.0 29 12106.0 30 14378.0 31 16650.0 32 18869.5 33 21089.0 34 24484.0 35 27879.0 36 30542.5 37 33206.0 38 36550.5 39 39895.0 40 46680.0 41 53465.0 42 63344.5 43 73224.0 44 89916.0 45 106608.0 46 138040.0 47 169472.0 48 185964.5 49 202457.0 50 196582.0 51 190707.0 52 160495.0 53 130283.0 54 113414.5 55 96546.0 56 85131.5 57 73717.0 58 67170.5 59 60624.0 60 55002.0 61 49380.0 62 44366.0 63 39352.0 64 34847.0 65 30342.0 66 25478.5 67 20615.0 68 17299.5 69 13984.0 70 12738.5 71 11493.0 72 9373.0 73 7253.0 74 5934.0 75 3723.0 76 2831.0 77 2078.5 78 1326.0 79 1004.0 80 682.0 81 430.0 82 178.0 83 109.0 84 40.0 85 36.5 86 33.0 87 17.0 88 1.0 89 1.0 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1557332.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.467058886574137 #Duplication Level Percentage of deduplicated Percentage of total 1 66.13286807468376 18.164753817453775 2 13.89422397645646 7.632669362891596 3 6.153719598237285 5.070737357287465 4 3.3191232295668964 3.646662127932402 5 2.0230481785221475 2.7783591724922188 6 1.2978658035855524 2.138913387237314 7 0.8621554803125132 1.6576612742988488 8 0.6154667272105311 1.3524048671214974 9 0.4674932284680764 1.1556597631866579 >10 4.063710828546528 27.11465346046741 >50 1.0695176134438744 19.094249022458545 >100 0.08722700831067186 4.317657870638338 >500 0.008095919852449996 1.5616190343663023 >1k 0.004700856688519352 2.655684882421187 >5k 7.834761147532254E-4 1.6583145997464483 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTCTGCT 8422 0.5407966958875821 Illumina Single End Adapter 1 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTCTGC 8110 0.5207624321596166 No Hit CCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTCTGC 6586 0.42290275933455423 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGC 4645 0.29826652248846103 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCG 3923 0.25190518142566903 No Hit GAATCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTC 3229 0.2073417871076944 No Hit TCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTCTGC 2942 0.1889128329733159 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCC 2467 0.15841195069516328 No Hit ACTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTCTGC 2303 0.14788111976123267 No Hit TGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTCTGCTT 2114 0.1357449792337151 Illumina Single End Adapter 1 (95% over 22bp) GCCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTCTG 1678 0.10774837992155814 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.2842476748695846E-4 0.0 0.0 0.5646194902564129 0.0 2 1.926371512304377E-4 0.0 0.0 1.9114742392758899 0.0 3 1.926371512304377E-4 0.0 0.0 2.694415834260132 0.0 4 1.926371512304377E-4 0.0 0.0 3.709485196477052 0.0 5 1.926371512304377E-4 0.0 0.0 6.233352939514503 0.0 6 1.926371512304377E-4 0.0 0.0 7.8838680512568935 0.0 7 1.926371512304377E-4 0.0 0.0 9.400179280975411 0.0 8 1.926371512304377E-4 0.0 0.0 11.953071021464917 0.0 9 1.926371512304377E-4 0.0 0.0 12.876445099696147 0.0 10 1.926371512304377E-4 0.0 0.0 14.955963147228722 0.0 11 1.926371512304377E-4 0.0 0.0 17.66450570591242 0.0 12 2.568495349739169E-4 0.0 0.0 20.198390580813854 0.0 13 2.568495349739169E-4 0.0 0.0 21.068211531003023 0.0 14 2.568495349739169E-4 0.0 0.0 21.415407889904014 0.0 15 2.568495349739169E-4 0.0 0.0 22.074676433798317 0.0 16 2.568495349739169E-4 0.0 0.0 23.33747717249758 0.0 17 2.568495349739169E-4 0.0 0.0 24.811793503247863 0.0 18 3.2106191871739614E-4 0.0 0.0 26.57243285311032 0.0 19 3.2106191871739614E-4 0.0 0.0 27.70546036426401 0.0 20 3.2106191871739614E-4 0.0 0.0 28.61772570010762 0.0 21 3.2106191871739614E-4 0.0 0.0 29.57352703212931 0.0 22 3.2106191871739614E-4 0.0 0.0 30.499341180942793 0.0 23 3.2106191871739614E-4 0.0 0.0 31.38052772305456 0.0 24 3.2106191871739614E-4 0.0 0.0 32.13014309087593 0.0 25 3.2106191871739614E-4 0.0 0.0 32.79852979326181 0.0 26 3.2106191871739614E-4 0.0 0.0 33.39185221905156 0.0 27 3.2106191871739614E-4 0.0 0.0 33.96809415076554 0.0 28 3.852743024608754E-4 0.0 0.0 34.566039868184816 0.0 29 3.852743024608754E-4 0.0 0.0 35.189798963868974 0.0 30 3.852743024608754E-4 0.0 0.0 35.83417023473479 0.0 31 3.852743024608754E-4 0.0 0.0 36.43628975709739 0.0 32 3.852743024608754E-4 0.0 0.0 37.07982626697454 0.0 33 4.4948668620435465E-4 0.0 0.0 37.70615385800844 0.0 34 4.4948668620435465E-4 0.0 0.0 38.3303624403788 0.0 35 4.4948668620435465E-4 0.0 0.0 38.99521746165878 0.0 36 5.136990699478338E-4 0.0 0.0 39.63169060932415 0.0 37 5.779114536913131E-4 0.0 0.0 40.21486747848243 0.0 38 5.779114536913131E-4 0.0 0.0 40.83426013207203 0.0 39 5.779114536913131E-4 0.0 0.0 41.49417079980377 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCTAT 40 6.8175723E-9 45.000004 23 AGATTCG 20 7.034058E-4 45.000004 1 AGTTACG 40 6.8175723E-9 45.000004 1 CGGTCGT 20 7.034058E-4 45.000004 21 AATCGAC 20 7.034058E-4 45.000004 37 TGCGTAA 20 7.034058E-4 45.000004 29 TACGTCA 25 3.891446E-5 45.0 32 TAGTACG 85 0.0 45.0 1 CGGGTAT 160 0.0 42.187504 6 GTACGTA 65 0.0 41.538464 12 AATCGTT 50 1.0822987E-9 40.5 22 TACGGGA 485 0.0 40.360825 4 TATACGG 130 0.0 39.807693 2 CGTCTAG 40 3.4592813E-7 39.375004 15 ACGCATC 275 0.0 39.272728 29 ATACGCA 275 0.0 39.272728 27 GCGATAT 110 0.0 38.863636 9 TACGGGT 140 0.0 38.571426 4 TACGCAT 280 0.0 38.571426 28 TATACGC 280 0.0 38.571426 26 >>END_MODULE