##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935058.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1010646 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.237329391300214 33.0 31.0 34.0 30.0 34.0 2 32.41423406415303 34.0 31.0 34.0 30.0 34.0 3 32.422565369080765 34.0 31.0 34.0 30.0 34.0 4 35.936769155569806 37.0 35.0 37.0 35.0 37.0 5 35.86574626526004 37.0 35.0 37.0 35.0 37.0 6 35.82335159887834 37.0 35.0 37.0 35.0 37.0 7 36.09665698968779 37.0 35.0 37.0 35.0 37.0 8 35.860079592656575 37.0 35.0 37.0 35.0 37.0 9 37.57412189827101 39.0 38.0 39.0 35.0 39.0 10 37.41701149561766 39.0 37.0 39.0 35.0 39.0 11 37.27070111591992 39.0 37.0 39.0 34.0 39.0 12 36.95760632308444 39.0 35.0 39.0 33.0 39.0 13 36.76893195045545 39.0 35.0 39.0 33.0 39.0 14 37.82850572801951 40.0 36.0 41.0 33.0 41.0 15 37.920611173447476 40.0 36.0 41.0 33.0 41.0 16 38.00463169101743 40.0 36.0 41.0 34.0 41.0 17 38.03291261232914 40.0 36.0 41.0 34.0 41.0 18 38.05424253398321 40.0 36.0 41.0 34.0 41.0 19 38.02439726669873 40.0 36.0 41.0 34.0 41.0 20 37.984422834503874 40.0 36.0 41.0 34.0 41.0 21 37.90346768304629 40.0 35.0 41.0 34.0 41.0 22 37.84687219857398 40.0 35.0 41.0 34.0 41.0 23 37.63591603786093 39.0 35.0 41.0 33.0 41.0 24 37.42327778470404 39.0 35.0 41.0 33.0 41.0 25 37.398560920440985 39.0 35.0 41.0 33.0 41.0 26 37.56839387876665 39.0 35.0 41.0 33.0 41.0 27 37.58972182148843 39.0 35.0 41.0 33.0 41.0 28 37.6006346435844 39.0 35.0 41.0 33.0 41.0 29 37.66424643247982 39.0 35.0 41.0 34.0 41.0 30 37.58308844046283 39.0 35.0 41.0 33.0 41.0 31 37.44793627046463 39.0 35.0 41.0 33.0 41.0 32 37.3566016191624 39.0 35.0 41.0 33.0 41.0 33 37.24453765215516 39.0 35.0 41.0 33.0 41.0 34 37.03879894641645 39.0 35.0 41.0 32.0 41.0 35 37.045564915905274 39.0 35.0 41.0 33.0 41.0 36 37.011643048109825 39.0 35.0 41.0 33.0 41.0 37 36.90671906879362 39.0 35.0 41.0 32.0 41.0 38 36.853750967203155 39.0 35.0 41.0 32.0 41.0 39 36.79516863471483 39.0 35.0 41.0 32.0 41.0 40 36.692602553218435 39.0 35.0 41.0 31.0 41.0 41 36.68995771021703 39.0 35.0 41.0 32.0 41.0 42 36.675578788220605 39.0 35.0 41.0 32.0 41.0 43 36.567507317102134 39.0 35.0 41.0 32.0 41.0 44 36.41837201156488 38.0 35.0 41.0 31.0 41.0 45 36.41553422266551 38.0 35.0 41.0 31.0 41.0 46 36.30510485372722 38.0 35.0 40.0 31.0 41.0 47 36.2612358827918 38.0 35.0 40.0 31.0 41.0 48 36.21640020343424 38.0 35.0 40.0 31.0 41.0 49 36.16586124122591 38.0 35.0 40.0 31.0 41.0 50 36.05559315526901 38.0 35.0 40.0 31.0 41.0 51 35.08830589543717 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 9.0 9 17.0 10 23.0 11 18.0 12 18.0 13 17.0 14 27.0 15 60.0 16 100.0 17 141.0 18 306.0 19 545.0 20 941.0 21 1394.0 22 2229.0 23 3190.0 24 4468.0 25 5473.0 26 6348.0 27 7378.0 28 8820.0 29 10600.0 30 13701.0 31 17913.0 32 23943.0 33 35526.0 34 76024.0 35 112573.0 36 70079.0 37 106651.0 38 198358.0 39 303539.0 40 215.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.05161055404167 23.570171949426406 25.637067776451893 10.741149720080028 2 30.490498156624575 25.394252784852462 25.434524056890346 18.68072500163262 3 29.997150337506902 25.29204093223542 27.085547263829273 17.6252614664284 4 27.8559456031093 25.424035715769914 27.316191821864432 19.403826859256355 5 23.80556594495006 30.215030782291723 25.44995972872796 20.529443544030254 6 26.215509683905147 33.38280664050518 24.464649343093427 15.937034332496244 7 79.41465161886556 6.617648513920798 8.563631578218288 5.404068288995355 8 79.47382169424309 4.755967965044141 8.631311062429377 7.138899278283395 9 73.97723832083638 7.466907304832751 10.966154321097594 7.589700053233278 10 45.04287356799512 23.882447464295115 16.795297265313472 14.279381702396291 11 33.19282914096529 24.21292915620306 22.841628028013766 19.75261367481789 12 29.544172737041457 21.51237921092054 28.50256172784536 20.440886324192643 13 23.95220482740742 27.803108111049763 28.98997275010241 19.254714311440406 14 18.60196349661504 30.47219303297099 29.850808294892573 21.0750351755214 15 17.64871181402786 24.58298949384849 37.59169877484302 20.17659991728063 16 20.094078440917986 25.921044559618306 32.60112838718997 21.383748612273735 17 19.75162420867445 24.376191069870163 27.028356120738618 28.84382860071677 18 21.74549743431429 25.9579516467685 30.674439912689504 21.6221110062277 19 22.709039564793212 27.121365938221693 26.624357094373302 23.545237402611797 20 25.326177514183996 27.79628079466005 25.956368500939003 20.921173190216948 21 21.913211945626855 28.842146508272926 28.998877945393343 20.245763600706876 22 21.64378031476897 25.079701497853847 26.50037698660065 26.776141200776532 23 20.135734965556683 27.126610108781907 26.793753698129713 25.943901227531697 24 22.555177579488763 23.618358950611785 29.77254152294671 24.05392194695274 25 18.79847147270162 26.892601365859065 26.813938807455823 27.49498835398349 26 18.49549693958122 28.26855298492251 27.291949901350225 25.94400017414604 27 19.871844345102044 27.71573825058428 28.470799864641034 23.941617539672645 28 16.886624990352704 26.00791968701207 31.859622459298308 25.245832863336915 29 18.388634596090025 23.68821526033844 29.556442117220076 28.36670802635146 30 20.093781601074955 25.615695307753654 30.262030424104978 24.028492667066413 31 23.77172620284452 26.67947035856274 25.87780488915011 23.670998549442636 32 24.07291969690673 25.48439315051957 23.787161874682134 26.655525277891567 33 24.886458760040608 24.626229164316683 27.026970868137806 23.460341207504904 34 19.639814534466073 24.53747405125039 28.657116339450212 27.165595074833327 35 18.624226484842367 25.436404042562877 26.17256685327998 29.766802619314774 36 24.064707127916204 24.877850404592706 28.081444937198587 22.975997530292506 37 21.15993137062829 26.493252830367904 30.00803446508471 22.338781333919098 38 20.036194671526925 27.686746892581578 25.72394290384566 26.55311553204584 39 23.06762209517477 24.521840486184086 28.275875034383947 24.134662384257197 40 22.29336483793534 23.703354092333022 28.450218968857545 25.553062100874097 41 19.9423932811291 24.181859919299143 25.519222358768552 30.356524440803206 42 22.585455243477934 21.97891249755107 27.446405566340736 27.989226692630258 43 23.460638047347935 20.876152480690568 28.666318374584176 26.996891097377322 44 19.982763499781328 22.643635852712027 29.272069547596292 28.101531099910353 45 20.183130393827316 23.82505842797577 26.36363276557766 29.628178412619256 46 22.088545346243887 23.64072088545346 29.27761055799954 24.993123210303114 47 19.018627689616345 23.633497782606373 30.80989782772603 26.537976700051253 48 20.064097616771846 21.05880793076903 31.71456672267045 27.16252772978867 49 22.377271566898795 19.546606823754313 33.409126439920605 24.666995169426286 50 19.992361321372666 21.47408687116953 31.037573987330873 27.495977820126928 51 19.104909137324046 22.11704197117487 27.82438163313366 30.953667258367418 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1383.0 1 1490.0 2 1597.0 3 1894.0 4 2191.0 5 1786.0 6 1381.0 7 1486.0 8 1591.0 9 1688.5 10 1786.0 11 1948.5 12 2111.0 13 2164.5 14 2218.0 15 2252.5 16 2287.0 17 2504.0 18 2721.0 19 2638.0 20 2555.0 21 2802.0 22 3049.0 23 3283.5 24 3518.0 25 3477.5 26 4331.5 27 5226.0 28 5930.0 29 6634.0 30 9243.5 31 11853.0 32 12701.0 33 13549.0 34 16177.5 35 18806.0 36 20791.0 37 22776.0 38 23512.5 39 24249.0 40 31469.5 41 38690.0 42 47746.5 43 56803.0 44 65770.0 45 74737.0 46 88617.5 47 102498.0 48 115003.5 49 127509.0 50 122268.0 51 117027.0 52 100283.0 53 83539.0 54 70697.0 55 57855.0 56 52400.0 57 46945.0 58 44930.5 59 42916.0 60 39416.0 61 35916.0 62 32328.0 63 28740.0 64 25226.0 65 21712.0 66 18768.0 67 15824.0 68 13388.0 69 10952.0 70 8233.0 71 5514.0 72 4621.5 73 3729.0 74 3003.0 75 1664.5 76 1052.0 77 1031.0 78 1010.0 79 598.5 80 187.0 81 208.0 82 229.0 83 135.0 84 41.0 85 27.5 86 14.0 87 12.0 88 10.0 89 5.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1010646.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.301143937732892 #Duplication Level Percentage of deduplicated Percentage of total 1 65.89997188950592 13.378448148214108 2 12.62915363718336 5.127725316004046 3 6.088443097268503 3.7080707902303245 4 3.467237434793518 2.815555449201559 5 2.1802648362787207 2.213093513183597 6 1.4741829555692845 1.795656022293872 7 1.0865432028055924 1.5440648968305142 8 0.7746602523594583 1.2581191428791878 9 0.5970274353794726 1.0908305910372773 >10 3.5747526786239483 14.624737474033042 >50 1.0951523126812706 16.471216028234352 >100 1.118809968381481 32.0323062428682 >500 0.008378753067174087 1.101336282525818 >1k 0.004435810447327457 1.589618381074559 >5k 9.857356549616571E-4 1.2492217213895556 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTGC 6889 0.6816432262137286 No Hit CCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTGC 5596 0.5537052538673285 No Hit CTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTGCT 4246 0.4201273245033375 No Hit TCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTGC 2433 0.2407371126982148 No Hit ACTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTGC 2148 0.21253732761026115 No Hit GCCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTG 1313 0.12991690463327416 No Hit ACCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTG 1258 0.12447484084437083 No Hit AGCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTG 1176 0.11636121846818769 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1143 0.11309598019484568 No Hit AAAACTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTC 1096 0.10844548932069191 No Hit CGCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTG 1074 0.10626866380513057 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.8946614343697E-5 0.0 0.0 0.44308293903107515 0.0 2 9.8946614343697E-5 0.0 0.0 2.2233304243028718 0.0 3 9.8946614343697E-5 0.0 0.0 3.097721655258122 0.0 4 9.8946614343697E-5 0.0 0.0 4.0546343625760155 0.0 5 9.8946614343697E-5 0.0 0.0 6.627444228740825 0.0 6 9.8946614343697E-5 0.0 0.0 7.884659910591839 0.0 7 9.8946614343697E-5 0.0 0.0 9.191249953000359 0.0 8 9.8946614343697E-5 0.0 0.0 11.055107327392578 0.0 9 9.8946614343697E-5 0.0 0.0 11.69667717479711 0.0 10 9.8946614343697E-5 0.0 0.0 13.235791760913317 0.0 11 9.8946614343697E-5 0.0 0.0 15.678981562287882 0.0 12 9.8946614343697E-5 0.0 0.0 17.421629334109074 0.0 13 9.8946614343697E-5 0.0 0.0 18.101491521264617 0.0 14 9.8946614343697E-5 0.0 0.0 18.353310654769327 0.0 15 9.8946614343697E-5 0.0 0.0 18.857542601464807 0.0 16 9.8946614343697E-5 0.0 0.0 19.912511403597303 0.0 17 9.8946614343697E-5 0.0 0.0 21.078894093480802 0.0 18 9.8946614343697E-4 0.0 0.0 22.49323699890961 0.0 19 9.8946614343697E-4 0.0 0.0 23.312712858904106 0.0 20 9.8946614343697E-4 0.0 0.0 24.061342943028517 0.0 21 9.8946614343697E-4 0.0 0.0 24.935734173983768 0.0 22 9.8946614343697E-4 0.0 0.0 25.827540009063508 0.0 23 9.8946614343697E-4 0.0 0.0 26.716971125399002 0.0 24 9.8946614343697E-4 0.0 0.0 27.403363789101228 0.0 25 9.8946614343697E-4 0.0 0.0 27.97586889969386 0.0 26 0.001088412757780667 0.0 0.0 28.49613019791302 0.0 27 0.001088412757780667 0.0 0.0 29.004023169339213 0.0 28 0.001088412757780667 0.0 0.0 29.543875897198426 0.0 29 0.001088412757780667 0.0 0.0 30.088774902389165 0.0 30 0.001088412757780667 0.0 0.0 30.706795455579897 0.0 31 0.001088412757780667 0.0 0.0 31.294439398167114 0.0 32 0.001088412757780667 0.0 0.0 31.807477593539183 0.0 33 0.001088412757780667 0.0 0.0 32.3111158605486 0.0 34 0.001088412757780667 0.0 0.0 32.84562547123325 0.0 35 0.0011873593721243641 0.0 0.0 33.418625314897604 0.0 36 0.0011873593721243641 0.0 0.0 33.9201857030058 0.0 37 0.0011873593721243641 0.0 0.0 34.439259641852836 0.0 38 0.001286305986468061 0.0 0.0 34.92864959639676 0.0 39 0.001286305986468061 0.0 0.0 35.44406251051308 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGGT 30 2.1652413E-6 45.000004 18 AACGTAG 30 2.1652413E-6 45.000004 1 AATCCCG 35 1.211738E-7 45.000004 23 CGAGTTA 35 1.211738E-7 45.000004 6 CAACGTT 30 2.1652413E-6 45.000004 15 TAGCGCG 45 3.8380676E-10 45.000004 1 CTCCCGT 35 1.211738E-7 45.000004 21 GTTAGTG 45 3.8380676E-10 45.000004 1 TCGATTG 30 2.1652413E-6 45.000004 1 CGTTCGG 45 3.8380676E-10 45.000004 2 TCGGCCC 35 1.211738E-7 45.000004 14 GTTACGT 35 1.211738E-7 45.000004 35 TACGATA 70 0.0 45.000004 17 TTGCGCA 35 1.211738E-7 45.000004 15 GCGATAT 30 2.1652413E-6 45.000004 9 ACGTCCA 35 1.211738E-7 45.000004 36 ATGCGAG 30 2.1652413E-6 45.000004 1 TACTACG 45 3.8380676E-10 45.000004 1 GCGTGAA 35 1.211738E-7 45.000004 39 GTAAGTC 35 1.211738E-7 45.000004 19 >>END_MODULE