SRR2935053.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2935053.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6121140
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	66831	1.0918064282143523	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTT	38514	0.6291965222164498	No Hit
CGTTCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTTC	28498	0.46556687153046655	No Hit
CGCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTTCTG	23890	0.3902867766461803	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCT	21609	0.3530224762054127	No Hit
CGTCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTTCT	14972	0.2445949610693433	No Hit
CCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTTCTGC	9712	0.15866325553736724	No Hit
CGTTTTTCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTC	8694	0.14203236651996196	No Hit
CTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTTCTGCT	7657	0.12509107780576822	No Hit
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG	6872	0.11226666928055885	No Hit
GCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTTCTGC	6833	0.11162953306083508	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	35920	43.590614	1
CGTTCTG	3510	39.294872	1
CGTTTCT	4625	38.432434	1
CGTAAGG	785	38.12102	2
CGTTTTC	2735	37.76051	1
GTTTTTT	41595	37.60548	2
TACGGGA	1990	35.05025	4
ACGATAG	340	34.411762	1
ACGGGTA	600	34.125004	5
CGGTCTA	395	33.607597	31
ACAACGA	1135	33.502205	13
TTAACGG	440	33.238636	2
GACCGAT	2420	33.099174	9
CACAACG	1190	32.710083	12
TGGGCGA	2445	32.668713	6
TACGGGT	670	32.574627	4
GGGCGAT	8455	32.465996	7
ACGGGAT	2180	31.995415	5
CTAAGCG	155	31.935486	1
AGGGCGA	3975	31.867926	6