##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935053.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6121140 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.377657919929945 33.0 31.0 34.0 31.0 34.0 2 32.58661017392185 34.0 31.0 34.0 31.0 34.0 3 32.508809633499645 34.0 31.0 34.0 31.0 34.0 4 36.07232770366304 37.0 35.0 37.0 35.0 37.0 5 36.00600313013589 37.0 35.0 37.0 35.0 37.0 6 35.9546349209461 37.0 35.0 37.0 35.0 37.0 7 36.18903080145202 37.0 36.0 37.0 35.0 37.0 8 35.99831926732602 37.0 36.0 37.0 35.0 37.0 9 37.746957592866686 39.0 38.0 39.0 35.0 39.0 10 37.606255370731596 39.0 37.0 39.0 35.0 39.0 11 37.522719297385784 39.0 37.0 39.0 35.0 39.0 12 37.296331565688746 39.0 37.0 39.0 35.0 39.0 13 37.200731072970065 39.0 37.0 39.0 34.0 39.0 14 38.24265316591354 40.0 38.0 41.0 33.0 41.0 15 38.340567770055905 40.0 38.0 41.0 33.0 41.0 16 38.41301620286417 40.0 38.0 41.0 34.0 41.0 17 38.42365637773356 40.0 38.0 41.0 34.0 41.0 18 38.32492362533777 40.0 37.0 41.0 34.0 41.0 19 38.20316640364376 40.0 37.0 41.0 34.0 41.0 20 38.06862136791513 40.0 36.0 41.0 34.0 41.0 21 37.9986979549561 40.0 35.0 41.0 34.0 41.0 22 37.98724142888416 40.0 35.0 41.0 34.0 41.0 23 37.814466096184695 40.0 35.0 41.0 34.0 41.0 24 37.59597787340267 39.0 35.0 41.0 33.0 41.0 25 37.548074541670346 39.0 35.0 41.0 33.0 41.0 26 37.68991233659089 39.0 35.0 41.0 34.0 41.0 27 37.7332274706999 40.0 35.0 41.0 34.0 41.0 28 37.67282957096227 40.0 35.0 41.0 34.0 41.0 29 37.65363494381766 40.0 35.0 41.0 34.0 41.0 30 37.53423806676534 40.0 35.0 41.0 33.0 41.0 31 37.373364111913794 40.0 35.0 41.0 33.0 41.0 32 37.19854422542206 40.0 35.0 41.0 33.0 41.0 33 36.98679951773689 39.0 35.0 41.0 32.0 41.0 34 36.70518400167289 39.0 35.0 41.0 31.0 41.0 35 36.513127620018494 39.0 35.0 41.0 31.0 41.0 36 36.433908226245435 39.0 35.0 41.0 30.0 41.0 37 36.384252769908876 39.0 35.0 41.0 30.0 41.0 38 36.298513512188904 39.0 35.0 41.0 30.0 41.0 39 36.19487399405993 39.0 35.0 41.0 30.0 41.0 40 36.12192222363808 39.0 35.0 41.0 30.0 41.0 41 35.99999444547911 39.0 35.0 41.0 30.0 41.0 42 35.955695507699545 39.0 35.0 41.0 30.0 41.0 43 35.885941180891145 39.0 35.0 41.0 30.0 41.0 44 35.749711001545464 38.0 35.0 41.0 29.0 41.0 45 35.71290364213202 38.0 35.0 41.0 29.0 41.0 46 35.63764560196303 38.0 35.0 40.0 29.0 41.0 47 35.57737578294239 38.0 35.0 40.0 29.0 41.0 48 35.47814099987911 38.0 35.0 40.0 29.0 41.0 49 35.410307230352515 38.0 35.0 40.0 28.0 41.0 50 35.3389685581444 37.0 35.0 40.0 28.0 41.0 51 34.35611487402674 36.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 5.0 8 36.0 9 81.0 10 106.0 11 92.0 12 89.0 13 121.0 14 179.0 15 264.0 16 518.0 17 993.0 18 1667.0 19 2954.0 20 5012.0 21 8086.0 22 12277.0 23 18830.0 24 29031.0 25 48378.0 26 71057.0 27 83780.0 28 86029.0 29 87305.0 30 94906.0 31 113139.0 32 144222.0 33 212273.0 34 441103.0 35 451571.0 36 435672.0 37 661205.0 38 1184324.0 39 1924230.0 40 1605.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.00465926281706 21.052777750549733 24.418310968218336 17.52425201841487 2 36.504147920158665 22.426802850449427 24.363549926974386 16.705499302417522 3 29.394393854739477 22.526245111204776 31.465364294886243 16.6139967391695 4 26.582597359315425 23.999320388032295 31.562944157460866 17.85513809519142 5 24.658396965271177 27.358220854285314 29.468563045445784 18.51481913499773 6 25.922638593464615 30.773728423136866 27.749716556066357 15.553916427332162 7 76.7722515740532 5.150968610422241 12.717287956165027 5.359491859359531 8 78.8402323750151 3.4539481207748883 12.559523226065734 5.146296278144267 9 72.50211561898601 5.569779485520671 14.920325298882235 7.007779596611089 10 42.048409283238094 21.615091306521332 21.107359086706072 15.229140323534503 11 30.91984499619352 20.659190935021908 28.65833815269705 19.762625916087526 12 27.733461414050325 18.462753670067993 32.619773440894996 21.184011474986686 13 25.03946977197058 19.05184328409414 35.44632209032958 20.4623648536057 14 19.679046713520684 21.50707221203893 37.226300983150196 21.587580091290185 15 18.718049252263466 21.600861930947506 37.92102451504132 21.760064301747715 16 24.116700483896793 22.467138474205786 33.022100458411344 20.39406058348608 17 24.5386480296154 23.16526006593543 31.091447018039126 21.204644886410048 18 24.580944072509368 23.080602632842904 31.663546332872635 20.674906961775093 19 23.883083869998075 25.769529858817148 29.01611464531117 21.33127162587361 20 23.247744701150438 27.79776316176398 28.574726276477914 20.379765860607666 21 23.015990485432454 25.655694854226503 31.460038489562404 19.868276170778646 22 22.392087094887554 22.3928712625426 32.399504013958186 22.815537628611665 23 21.588838026903485 23.615045563408124 32.31139951054869 22.484716899139702 24 22.231741146257068 23.7062867374378 31.411779505124866 22.65019261118027 25 24.203154967865462 24.37766494476519 28.83493924334356 22.584240844025786 26 21.36450073025613 23.686094420320398 29.85569681464564 25.093708034777833 27 21.459417690168824 22.191879290458967 31.868442806405344 24.480260212966865 28 21.00620145920531 22.953240736202734 30.31797998412061 25.722577820471347 29 22.463707740714963 23.74281588070196 29.775058240785214 24.018418137797862 30 24.61425486102262 21.851109433863627 31.871007688110385 21.66362801700337 31 24.670371858836752 22.052166753251846 31.489003682320615 21.788457705590787 32 26.099533746981773 21.151239801736278 30.455879133625434 22.293347317656515 33 25.062782422882012 20.979980853239756 30.608710142228407 23.34852658164982 34 22.531766958442383 20.910892415465092 32.501788882463075 24.055551743629454 35 21.36126603867907 23.69677870462038 30.97828182332049 23.963673433380055 36 22.757345853876892 24.090365520148207 28.910889148099866 24.241399477875035 37 22.264414798550597 24.051304168831297 29.619940076521694 24.064340956096412 38 22.132021159457224 22.957815047523827 29.751696579395343 25.15846721362361 39 21.55920302427326 22.354724773489906 28.80282104313902 27.283251159097816 40 23.560758290122426 20.760626288567163 30.097645209879204 25.580970211431204 41 20.9943899339012 22.300290468768893 29.95589056940374 26.74942902792617 42 20.745678092642876 23.041018503089294 31.892768340537874 24.32053506372996 43 21.48877496675456 21.66648696157905 32.28981856320882 24.554919508457576 44 23.458800158140477 21.23754725426963 29.668983228614277 25.634669358975614 45 22.016111377945936 21.250535031056305 29.291635218276333 27.441718372721418 46 22.304619727697784 21.55479208121363 29.45368019682608 26.686907994262505 47 20.946261644072838 22.705149694337983 31.40977007550881 24.938818586080373 48 21.08484694027583 22.560176699111604 31.447295765167926 24.90768059544464 49 22.550881045034096 20.803559467680856 31.563859019725083 25.081700467559966 50 20.931166416713225 21.4025001878735 31.879143427531474 25.7871899678818 51 20.571249799873883 21.04233851864195 30.999356329049814 27.387055352434352 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3079.0 1 4772.5 2 6466.0 3 58548.0 4 110630.0 5 72199.5 6 33769.0 7 33376.0 8 32983.0 9 33265.5 10 33548.0 11 32647.5 12 31747.0 13 29963.5 14 28180.0 15 26640.5 16 25101.0 17 23574.0 18 22047.0 19 21401.5 20 20756.0 21 20911.0 22 21066.0 23 22985.0 24 24904.0 25 27691.5 26 36432.5 27 42386.0 28 48286.0 29 54186.0 30 62442.5 31 70699.0 32 81533.0 33 92367.0 34 108499.5 35 124632.0 36 137650.5 37 150669.0 38 162877.0 39 175085.0 40 183594.0 41 192103.0 42 209822.5 43 227542.0 44 262294.0 45 297046.0 46 388479.5 47 479913.0 48 533081.0 49 586249.0 50 591188.5 51 596128.0 52 527517.0 53 458906.0 54 414275.5 55 369645.0 56 357615.5 57 345586.0 58 336413.0 59 327240.0 60 301859.0 61 276478.0 62 252048.5 63 227619.0 64 206547.5 65 185476.0 66 161144.0 67 136812.0 68 117536.0 69 98260.0 70 83238.5 71 68217.0 72 56960.0 73 45703.0 74 39147.5 75 25079.5 76 17567.0 77 13003.5 78 8440.0 79 6625.0 80 4810.0 81 3667.0 82 2524.0 83 1653.0 84 782.0 85 596.5 86 411.0 87 307.5 88 204.0 89 128.5 90 53.0 91 39.5 92 26.0 93 20.5 94 15.0 95 12.0 96 9.0 97 6.5 98 4.0 99 2.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 6121140.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.46280015598729 #Duplication Level Percentage of deduplicated Percentage of total 1 71.24725317449474 14.579183033727167 2 10.740389399087414 4.395568837420203 3 4.447652427957936 2.7303426838978475 4 2.2969733462784263 1.8801002619409934 5 1.4207611533448494 1.4536375775142834 6 0.9955737894331916 1.2223336496226223 7 0.7063880258924636 1.01182739044939 8 0.5616341812513262 0.9194086409373947 9 0.45229762152366937 0.8329748256240499 >10 4.677688164088589 22.787711074559514 >50 1.922321404249145 28.2484600687123 >100 0.5203024004674364 13.846969347823082 >500 0.006361084625627957 0.8640158931464028 >1k 0.0033436466575190466 1.1276011285182268 >5k 5.708665025032169E-4 0.8571737748458855 >10k+ 4.893141450027573E-4 3.242691811260652 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 66831 1.0918064282143523 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTT 38514 0.6291965222164498 No Hit CGTTCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTTC 28498 0.46556687153046655 No Hit CGCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTTCTG 23890 0.3902867766461803 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCT 21609 0.3530224762054127 No Hit CGTCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTTCT 14972 0.2445949610693433 No Hit CCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTTCTGC 9712 0.15866325553736724 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTC 8694 0.14203236651996196 No Hit CTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTTCTGCT 7657 0.12509107780576822 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 6872 0.11226666928055885 No Hit GCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTTCTGC 6833 0.11162953306083508 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.7970508761439862E-4 0.0 0.0 0.13074361965254838 0.0 2 1.7970508761439862E-4 0.0 0.0 0.4777704806620989 0.0 3 1.7970508761439862E-4 0.0 0.0 1.1029644804725918 0.0 4 1.7970508761439862E-4 0.0 0.0 1.6896852547074566 0.0 5 1.7970508761439862E-4 0.0 0.0 3.1900757048523642 0.0 6 1.7970508761439862E-4 0.0 0.0 5.166619289870841 0.0 7 1.7970508761439862E-4 0.0 0.0 6.748514165661952 0.0 8 1.7970508761439862E-4 0.0 0.0 8.59088339753706 0.0 9 1.7970508761439862E-4 0.0 0.0 9.898482962324012 0.0 10 1.7970508761439862E-4 0.0 0.0 11.44737744929866 0.0 11 1.7970508761439862E-4 0.0 0.0 12.998363050020094 0.0 12 1.7970508761439862E-4 0.0 0.0 14.026374172131336 0.0 13 1.7970508761439862E-4 0.0 0.0 14.528486523752111 0.0 14 1.7970508761439862E-4 0.0 0.0 14.917450017480403 0.0 15 1.7970508761439862E-4 0.0 0.0 15.218243660494613 0.0 16 1.7970508761439862E-4 0.0 0.0 15.635077779629285 0.0 17 1.7970508761439862E-4 0.0 0.0 16.099827809852414 0.0 18 2.1237873990792564E-4 0.0 0.0 16.619877996582336 0.0 19 2.1237873990792564E-4 0.0 0.0 16.970498959344173 0.0 20 2.1237873990792564E-4 0.0 0.0 17.347111812505513 0.0 21 2.1237873990792564E-4 0.0 0.0 17.78274961853511 0.0 22 2.2871556605468915E-4 0.0 0.0 18.2724296454582 0.0 23 2.613892183482162E-4 0.0 0.0 18.72651172820749 0.0 24 2.613892183482162E-4 0.0 0.0 19.107649882211483 0.0 25 2.613892183482162E-4 0.0 0.0 19.443812753833438 0.0 26 2.613892183482162E-4 0.0 0.0 19.769928477375128 0.0 27 2.613892183482162E-4 0.0 0.0 20.170785180538267 0.0 28 2.940628706417432E-4 1.6336826146763512E-5 0.0 20.522108626824416 0.0 29 3.4307334908203373E-4 1.6336826146763512E-5 0.0 20.912787487298118 0.0 30 3.4307334908203373E-4 1.6336826146763512E-5 0.0 21.384954436591876 0.0 31 3.5941017522879724E-4 4.901047844029053E-5 0.0 21.740492784023893 0.0 32 3.5941017522879724E-4 6.534730458705405E-5 0.0 22.14174157101455 0.0 33 3.9208382752232426E-4 6.534730458705405E-5 0.0 22.526571847727713 0.0 34 4.0842065366908777E-4 6.534730458705405E-5 0.0 22.932492966996342 0.0 35 4.247574798158513E-4 6.534730458705405E-5 0.0 23.348183508300743 0.0 36 4.410943059626148E-4 6.534730458705405E-5 0.0 23.72969740930611 0.0 37 4.574311321093783E-4 6.534730458705405E-5 0.0 24.163799553677908 0.0 38 4.574311321093783E-4 6.534730458705405E-5 0.0 24.685189360151867 0.0 39 4.7376795825614186E-4 6.534730458705405E-5 0.0 25.557183792561517 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 35920 0.0 43.590614 1 CGTTCTG 3510 0.0 39.294872 1 CGTTTCT 4625 0.0 38.432434 1 CGTAAGG 785 0.0 38.12102 2 CGTTTTC 2735 0.0 37.76051 1 GTTTTTT 41595 0.0 37.60548 2 TACGGGA 1990 0.0 35.05025 4 ACGATAG 340 0.0 34.411762 1 ACGGGTA 600 0.0 34.125004 5 CGGTCTA 395 0.0 33.607597 31 ACAACGA 1135 0.0 33.502205 13 TTAACGG 440 0.0 33.238636 2 GACCGAT 2420 0.0 33.099174 9 CACAACG 1190 0.0 32.710083 12 TGGGCGA 2445 0.0 32.668713 6 TACGGGT 670 0.0 32.574627 4 GGGCGAT 8455 0.0 32.465996 7 ACGGGAT 2180 0.0 31.995415 5 CTAAGCG 155 0.0 31.935486 1 AGGGCGA 3975 0.0 31.867926 6 >>END_MODULE