##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935051.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2969689 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.34962718318315 33.0 31.0 34.0 30.0 34.0 2 32.529606298841394 34.0 31.0 34.0 31.0 34.0 3 32.53166880437649 34.0 31.0 34.0 31.0 34.0 4 36.03845520524203 37.0 35.0 37.0 35.0 37.0 5 35.94866937244944 37.0 35.0 37.0 35.0 37.0 6 35.87129999134589 37.0 35.0 37.0 35.0 37.0 7 36.1036886354093 37.0 35.0 37.0 35.0 37.0 8 35.72873051689925 37.0 35.0 37.0 35.0 37.0 9 37.5497201895552 39.0 38.0 39.0 35.0 39.0 10 37.446433953185 39.0 37.0 39.0 35.0 39.0 11 37.38098164487931 39.0 37.0 39.0 35.0 39.0 12 37.1234708415595 39.0 37.0 39.0 34.0 39.0 13 36.964874436346705 39.0 37.0 39.0 33.0 39.0 14 37.87948670719392 40.0 37.0 41.0 33.0 41.0 15 37.985025031240646 40.0 37.0 41.0 33.0 41.0 16 38.198271603524816 40.0 37.0 41.0 33.0 41.0 17 38.20829554879316 40.0 37.0 41.0 34.0 41.0 18 38.231443763976635 40.0 37.0 41.0 34.0 41.0 19 38.20891749944186 40.0 37.0 41.0 34.0 41.0 20 38.07603658160838 40.0 36.0 41.0 33.0 41.0 21 38.078622037526486 40.0 36.0 41.0 34.0 41.0 22 38.08052324671034 40.0 36.0 41.0 34.0 41.0 23 37.86313246942694 40.0 36.0 41.0 34.0 41.0 24 37.665156519756785 40.0 35.0 41.0 33.0 41.0 25 37.613403962502474 40.0 35.0 41.0 33.0 41.0 26 37.75076784134635 40.0 35.0 41.0 33.0 41.0 27 37.7648033177885 40.0 36.0 41.0 33.0 41.0 28 37.72194125378112 40.0 36.0 41.0 33.0 41.0 29 37.71622786089722 40.0 36.0 41.0 33.0 41.0 30 37.62868098309284 40.0 36.0 41.0 33.0 41.0 31 37.52510347043074 40.0 35.0 41.0 33.0 41.0 32 37.42884490598174 40.0 35.0 41.0 33.0 41.0 33 37.32011769582606 40.0 35.0 41.0 33.0 41.0 34 37.135827354312184 39.0 35.0 41.0 32.0 41.0 35 37.069125083468336 39.0 35.0 41.0 32.0 41.0 36 37.01273163620837 39.0 35.0 41.0 32.0 41.0 37 36.982692800491904 39.0 35.0 41.0 32.0 41.0 38 36.81954204632202 39.0 35.0 41.0 31.0 41.0 39 36.77672577835592 39.0 35.0 41.0 31.0 41.0 40 36.63387849704127 39.0 35.0 41.0 31.0 41.0 41 36.60821789756436 39.0 35.0 41.0 31.0 41.0 42 36.63811698800784 39.0 35.0 41.0 31.0 41.0 43 36.597943757747025 39.0 35.0 41.0 31.0 41.0 44 36.53849679208833 39.0 35.0 41.0 31.0 41.0 45 36.53906587524822 39.0 35.0 41.0 31.0 41.0 46 36.46126883993576 39.0 35.0 41.0 31.0 41.0 47 36.33885063385425 38.0 35.0 40.0 31.0 41.0 48 36.294486055610534 38.0 35.0 40.0 31.0 41.0 49 36.27737517295582 38.0 35.0 40.0 31.0 41.0 50 36.165651352717404 38.0 35.0 40.0 31.0 41.0 51 35.135941170944164 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 17.0 9 45.0 10 45.0 11 46.0 12 54.0 13 61.0 14 69.0 15 127.0 16 231.0 17 442.0 18 753.0 19 1503.0 20 2797.0 21 4793.0 22 7620.0 23 10579.0 24 13240.0 25 16565.0 26 19484.0 27 22253.0 28 26232.0 29 31939.0 30 40261.0 31 53698.0 32 73970.0 33 111333.0 34 214004.0 35 231831.0 36 207424.0 37 332414.0 38 593351.0 39 951583.0 40 923.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.52395890613462 20.240099215776468 23.791009765669067 10.444932112419853 2 30.272294506259744 28.172377646278786 24.182801633437037 17.372526214024433 3 30.489657334488562 27.74866324386156 24.958539429549695 16.80313999210018 4 27.384045938817163 24.69342749358603 29.288689825769637 18.633836741827174 5 29.38045027610635 27.954509714653618 23.37638722438612 19.288652784853902 6 26.33491251104072 35.70215601701053 23.424473067718537 14.538458404230207 7 78.17007100743545 5.731778647528412 11.271045553928374 4.827104791107756 8 78.5092984484234 7.866918051014769 8.016866412610883 5.60691708795096 9 73.04205928634278 7.010397385046044 9.191703238958693 10.755840089652486 10 43.273117151324605 25.039692708563084 16.85509829480461 14.832091845307707 11 34.74616365552083 22.691399671817486 23.159462152434145 19.402974520227538 12 29.545215003995366 21.029070720873467 28.200360374436517 21.225353900694653 13 27.358150971364342 22.30805986754842 31.672070711781604 18.661718449305635 14 21.30751738650074 26.796644362423134 31.26677574655124 20.629062504524885 15 19.23440468008603 24.076830940883035 36.18180220218346 20.506962176847473 16 24.860684064897033 24.65672331345134 27.521063653466744 22.961528968184883 17 25.13118377042175 24.399120581313397 27.73532851419795 22.7343671340669 18 25.518598075421366 22.819628587370598 29.402641151985947 22.25913218522209 19 24.97604968062312 25.373768094908257 26.95686315974501 22.693319064723614 20 24.42501554876622 28.09479376459959 28.658691196283513 18.821499490350675 21 23.00655051757945 28.160053123407874 30.382070311066244 18.451326047946434 22 21.71261031037257 22.366517167285867 31.937283668424538 23.983588853917027 23 21.49814340828282 26.03808008178634 30.572460617930027 21.89131589200081 24 22.812018362865608 25.641708609891474 27.66623036957742 23.8800426576655 25 22.489526681076704 28.644716668984533 25.54998183311451 23.315774816824252 26 20.322936172777688 25.86530104667526 27.622454741893847 26.18930803865321 27 21.790429906970058 26.051818894167035 27.782370477177913 24.375380721684998 28 18.360205395245092 26.76546264608853 28.917135767415374 25.957196191251004 29 22.28748532253714 27.076269602641894 27.007811255656737 23.62843381916423 30 22.5099328582892 26.562579448555052 27.491430920880937 23.436056772274807 31 23.834111922157504 26.741386050862566 26.035857626842407 23.388644400137522 32 27.379432661130508 27.00673370174453 24.05790640029983 21.555927236825134 33 24.825730909869687 24.208427212411802 25.80239883704994 25.16344304066857 34 21.75103184205484 26.846346536623866 27.603530201310644 23.799091420010647 35 21.81730140765582 28.699436203588995 25.393500800925615 24.089761587829567 36 24.67143865906497 28.944916454214564 24.299514191553392 22.08413069516707 37 22.472790921877678 27.68050795891422 26.092967984189592 23.753733135018514 38 23.468215021842354 28.27120954416439 25.261971876516366 22.998603557476894 39 24.707469368004528 24.039251248194677 25.990566688969786 25.26271269483101 40 22.854750110196726 24.277390662793312 29.296670459431944 23.57118876757802 41 21.552728248648258 25.773035492942192 24.963253727915617 27.710982530493933 42 21.501174028660913 25.753942584560203 29.028056473253592 23.71682691352529 43 23.66924617358922 24.516708651983425 27.339462145699432 24.474583028727924 44 22.880240994932464 23.541252972954407 27.835136945316496 25.74336908679663 45 21.33529807329993 23.837580298812437 26.31659409453313 28.5105275333545 46 23.888999824560752 24.886646379469365 26.660199098289418 24.564154697680465 47 19.31576000045796 25.25823411138338 31.733962714614222 23.692043173544437 48 21.372844092428533 27.00087450234688 27.155133079591838 24.471148325632754 49 23.64779611602427 23.477811986372984 29.896261864457863 22.978130033144886 50 21.792820729712776 24.711476521615563 27.25090068353959 26.244802065132074 51 20.486657020314247 25.112225556278787 25.583756413550375 28.81736100985659 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1201.0 1 2270.0 2 3339.0 3 5083.5 4 6828.0 5 5076.0 6 3324.0 7 3396.0 8 3468.0 9 3779.0 10 4090.0 11 4184.5 12 4279.0 13 4440.0 14 4601.0 15 4586.5 16 4572.0 17 4590.5 18 4609.0 19 4889.0 20 5169.0 21 6391.0 22 7613.0 23 9653.5 24 11694.0 25 14235.5 26 20068.5 27 23360.0 28 27203.0 29 31046.0 30 35300.0 31 39554.0 32 45096.5 33 50639.0 34 60650.0 35 70661.0 36 77309.5 37 83958.0 38 91380.5 39 98803.0 40 110889.0 41 122975.0 42 133921.0 43 144867.0 44 161998.0 45 179129.0 46 256132.5 47 333136.0 48 316059.5 49 298983.0 50 293751.0 51 288519.0 52 252427.0 53 216335.0 54 201057.0 55 185779.0 56 171757.5 57 157736.0 58 149736.0 59 141736.0 60 126289.5 61 110843.0 62 98528.5 63 86214.0 64 77945.0 65 69676.0 66 60447.5 67 51219.0 68 45295.5 69 39372.0 70 31056.5 71 22741.0 72 19279.5 73 15818.0 74 13596.5 75 9122.5 76 6870.0 77 5375.5 78 3881.0 79 2707.0 80 1533.0 81 1176.0 82 819.0 83 604.5 84 390.0 85 246.0 86 102.0 87 61.5 88 21.0 89 17.5 90 14.0 91 11.0 92 8.0 93 7.5 94 7.0 95 5.0 96 3.0 97 3.0 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2969689.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.84768646223888 #Duplication Level Percentage of deduplicated Percentage of total 1 68.10290573307452 12.835822144243995 2 12.27820973130338 4.628316946664327 3 5.3855544057397955 3.045157225941387 4 2.9581888201608475 2.23020061513968 5 1.767225522525497 1.6654056278313418 6 1.1645550509685254 1.3169501081202832 7 0.8315710502020704 1.0971233297698333 8 0.6477873351741691 0.9767434070057588 9 0.49286904800940257 0.8360497155441043 >10 3.850860079187588 15.365119084143513 >50 1.332680125303759 18.630638957300803 >100 1.173394622988939 30.638415932918928 >500 0.008373459828542516 1.0319735154057401 >1k 0.004368761649674356 1.7865949280640485 >5k 7.281269416123926E-4 0.8020018250648153 >10k+ 7.281269416123926E-4 3.1134866368415013 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGC 29312 0.9870393835852845 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCG 26125 0.8797217486410193 No Hit GAATCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCGTCTTC 25278 0.8512002435271843 No Hit GCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCGTCTTCTGC 10034 0.33788049859766456 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCACAGTCAGT 6445 0.21702609263124858 No Hit CCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCGTCTTCTGC 6388 0.21510669972512275 No Hit GAATGACTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCGTCT 5324 0.17927803214410667 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 5219 0.1757423083696643 No Hit CTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCGTCTTCTGCT 4795 0.16146471903286844 No Hit GAATGATCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCGTC 4185 0.14092384758134607 No Hit GAACTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCGTCTTCT 4043 0.13614220209590971 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCACAGTCAGTCGTA 4010 0.1350309746239421 No Hit GAATGATCCGGCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGC 3267 0.11001151972479273 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3006 0.10122272062832169 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.683677987829702E-4 0.0 0.0 0.169546373374451 0.0 2 1.683677987829702E-4 0.0 0.0 0.9176381769269442 0.0 3 1.683677987829702E-4 0.0 0.0 1.280302415505462 0.0 4 1.683677987829702E-4 0.0 0.0 1.852315175090725 0.0 5 1.683677987829702E-4 0.0 0.0 3.894077797372048 0.0 6 1.683677987829702E-4 0.0 0.0 4.600246019027582 0.0 7 1.683677987829702E-4 0.0 0.0 5.47582591981854 0.0 8 1.683677987829702E-4 0.0 0.0 6.623454509883022 0.0 9 1.683677987829702E-4 0.0 0.0 7.000430011358092 0.0 10 1.683677987829702E-4 0.0 0.0 8.827591037310642 0.0 11 1.683677987829702E-4 0.0 0.0 10.208880458526128 0.0 12 1.683677987829702E-4 0.0 0.0 12.405171046530462 0.0 13 1.683677987829702E-4 0.0 0.0 12.900340742751178 0.0 14 2.0204135853956425E-4 0.0 0.0 13.137537297676625 0.0 15 2.0204135853956425E-4 0.0 0.0 13.632774341016853 0.0 16 2.0204135853956425E-4 0.0 0.0 14.330995602569832 0.0 17 2.3571491829615828E-4 0.0 0.0 15.11481505302407 0.0 18 6.061240756186927E-4 0.0 0.0 15.942006048444803 0.0 19 6.061240756186927E-4 0.0 0.0 16.761283757322737 0.0 20 6.061240756186927E-4 0.0 0.0 17.368923143130477 0.0 21 6.061240756186927E-4 0.0 0.0 18.032090228976838 0.0 22 6.061240756186927E-4 0.0 0.0 18.75418604439724 0.0 23 6.061240756186927E-4 0.0 0.0 19.39455613028839 0.0 24 6.061240756186927E-4 0.0 0.0 19.936801463048823 0.0 25 6.061240756186927E-4 0.0 0.0 20.42941196872804 0.0 26 6.061240756186927E-4 0.0 0.0 20.910809179008307 0.0 27 6.397976353752868E-4 0.0 0.0 21.517000601746513 0.0 28 6.397976353752868E-4 0.0 0.0 22.012406012885524 0.0 29 6.734711951318808E-4 0.0 0.0 22.551587051708108 0.0 30 6.734711951318808E-4 0.0 0.0 23.175356072639257 0.0 31 7.071447548884748E-4 0.0 0.0 23.652880823547516 0.0 32 7.071447548884748E-4 0.0 0.0 24.12026983296904 0.0 33 7.071447548884748E-4 0.0 0.0 24.599814997462698 0.0 34 7.408183146450689E-4 0.0 0.0 25.119768433664266 0.0 35 8.08165434158257E-4 0.0 0.0 25.666425002752813 0.0 36 8.75512553671445E-4 0.0 0.0 26.147283436076975 0.0 37 8.75512553671445E-4 0.0 0.0 26.670604228254206 0.0 38 8.75512553671445E-4 0.0 0.0 27.277031365910705 0.0 39 8.75512553671445E-4 0.0 0.0 28.36573122640115 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTTG 40 6.8212103E-9 45.0 1 TATTACG 20 7.035094E-4 45.0 15 TTAGTCG 20 7.035094E-4 45.0 1 CACGTAT 45 3.8562575E-10 45.0 11 TACGGCT 3350 0.0 40.164177 7 TACGATA 40 3.460682E-7 39.375 24 TACGTAG 120 0.0 39.374996 1 ATGCGAT 35 6.251632E-6 38.57143 31 ATCCGGC 790 0.0 38.449368 6 TGCGTAG 195 0.0 38.076923 1 CGTTAGG 245 0.0 37.65306 2 GCGAACC 60 1.5643309E-10 37.499996 33 CTATACG 30 1.1403575E-4 37.499996 43 ACTCGAA 30 1.1403575E-4 37.499996 37 AACTCGA 30 1.1403575E-4 37.499996 36 CGTTACG 85 0.0 37.058823 45 TATAACG 85 0.0 37.058823 1 ACGGCTG 3670 0.0 36.907356 8 CCGATGA 1640 0.0 36.493904 18 TGATCCG 840 0.0 36.42857 4 >>END_MODULE