SRR2935050.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2935050.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	572344
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTCTGC	4151	0.725263128468194	No Hit
CCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTCTGC	3090	0.5398851040632906	No Hit
CTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTCTGCT	2200	0.3843842164851907	No Hit
TCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTCTGC	1437	0.2510727814041905	No Hit
ACTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTCTGC	1250	0.21840012300294928	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	833	0.1455418419691654	No Hit
ACCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTCTG	754	0.131738954195379	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	754	0.131738954195379	No Hit
GCCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTCTG	735	0.1284192723257342	No Hit
GTGGAAGGGGATGGAGCTGGGTAAGGAGTGAAGGGATTTCTGGAAGCAAAC	703	0.12282822917685868	No Hit
AAAACTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTC	692	0.12090630809443272	No Hit
CGCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTCTG	609	0.1064045399270369	No Hit
ACCGCAGCATGATACTGACATTTTGTAGACGTAGTCTGACTTTTCCTATAC	594	0.1037837384510015	No Hit
AGCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTCTG	584	0.1020365374669779	No Hit
GGCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTCTG	576	0.10063877667975904	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGCGAG	25	3.8883416E-5	45.000004	1
TCACGAC	25	3.8883416E-5	45.000004	24
CTTAATT	25	3.8883416E-5	45.000004	19
CTTCGCA	25	3.8883416E-5	45.000004	12
GTGCAAC	25	3.8883416E-5	45.000004	41
AATCCTC	30	2.1635842E-6	45.000004	25
GTACCTT	25	3.8883416E-5	45.000004	10
AACCGAT	35	1.210501E-7	45.000004	16
CTGTCGG	30	2.1635842E-6	45.000004	32
TCGTTAG	45	3.8380676E-10	45.000004	1
GTACCGA	35	1.210501E-7	45.000004	23
ACACGTC	25	3.8883416E-5	45.000004	23
TCGCAAA	25	3.8883416E-5	45.000004	14
CAAACGA	30	2.1635842E-6	45.000004	39
GTATTCG	25	3.8883416E-5	45.000004	10
GGTCGTT	30	2.1635842E-6	45.000004	18
TACTTAT	25	3.8883416E-5	45.000004	31
CCTAGTG	25	3.8883416E-5	45.000004	41
ACGTTCA	50	2.1827873E-11	45.000004	44
CGGCCCA	25	3.8883416E-5	45.000004	25