##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935049.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3378021 Sequences flagged as poor quality 0 Sequence length 51 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.39096559790481 33.0 31.0 34.0 31.0 34.0 2 32.56353498098443 34.0 31.0 34.0 31.0 34.0 3 32.57034666155125 34.0 31.0 34.0 31.0 34.0 4 36.0726647347663 37.0 35.0 37.0 35.0 37.0 5 35.99341182307629 37.0 35.0 37.0 35.0 37.0 6 35.9349918191746 37.0 35.0 37.0 35.0 37.0 7 36.16756645384975 37.0 35.0 37.0 35.0 37.0 8 35.92886604316551 37.0 36.0 37.0 35.0 37.0 9 37.662370956249234 39.0 38.0 39.0 35.0 39.0 10 37.48737707669668 39.0 37.0 39.0 35.0 39.0 11 37.38039816803981 39.0 37.0 39.0 35.0 39.0 12 37.16883850041193 39.0 37.0 39.0 34.0 39.0 13 37.06145106853983 39.0 37.0 39.0 33.0 39.0 14 38.080626200962044 40.0 37.0 41.0 33.0 41.0 15 38.19786881135434 40.0 37.0 41.0 33.0 41.0 16 38.31405044551233 40.0 37.0 41.0 34.0 41.0 17 38.35251764272632 40.0 37.0 41.0 34.0 41.0 18 38.34948154555582 40.0 37.0 41.0 34.0 41.0 19 38.32615664615466 40.0 37.0 41.0 34.0 41.0 20 38.269748175040945 40.0 37.0 41.0 34.0 41.0 21 38.203602937933184 40.0 37.0 41.0 34.0 41.0 22 38.183196611270326 40.0 36.0 41.0 34.0 41.0 23 38.011208337662794 40.0 36.0 41.0 34.0 41.0 24 37.790547187243654 40.0 36.0 41.0 33.0 41.0 25 37.73087526690924 40.0 35.0 41.0 33.0 41.0 26 37.86898778900427 40.0 36.0 41.0 34.0 41.0 27 37.89417294919126 40.0 36.0 41.0 34.0 41.0 28 37.84374579080473 40.0 36.0 41.0 34.0 41.0 29 37.840175949172604 40.0 36.0 41.0 34.0 41.0 30 37.74265228072886 40.0 36.0 41.0 33.0 41.0 31 37.63797116714194 40.0 35.0 41.0 33.0 41.0 32 37.56232450893585 40.0 35.0 41.0 33.0 41.0 33 37.48677968550225 40.0 35.0 41.0 33.0 41.0 34 37.34195021286132 40.0 35.0 41.0 33.0 41.0 35 37.214921695276615 39.0 35.0 41.0 32.0 41.0 36 37.15619589102614 39.0 35.0 41.0 32.0 41.0 37 37.082632109155035 39.0 35.0 41.0 32.0 41.0 38 37.00551417531152 39.0 35.0 41.0 32.0 41.0 39 36.959703033225665 39.0 35.0 41.0 32.0 41.0 40 36.870958469470736 39.0 35.0 41.0 32.0 41.0 41 36.74035507772154 39.0 35.0 41.0 31.0 41.0 42 36.7212062920864 39.0 35.0 41.0 31.0 41.0 43 36.66117025323407 39.0 35.0 41.0 31.0 41.0 44 36.56274368927843 39.0 35.0 41.0 31.0 41.0 45 36.53684420552744 38.0 35.0 41.0 31.0 41.0 46 36.41278132966018 38.0 35.0 40.0 31.0 41.0 47 36.33150800424272 38.0 35.0 40.0 31.0 41.0 48 36.23780728420575 38.0 35.0 40.0 31.0 41.0 49 36.16874199420312 38.0 35.0 40.0 31.0 41.0 50 36.07903532867321 38.0 35.0 40.0 31.0 41.0 51 35.07020382644158 36.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 21.0 9 63.0 10 70.0 11 61.0 12 61.0 13 59.0 14 94.0 15 142.0 16 268.0 17 470.0 18 828.0 19 1527.0 20 2422.0 21 3739.0 22 5774.0 23 8171.0 24 11355.0 25 15178.0 26 19468.0 27 24156.0 28 29147.0 29 35223.0 30 44946.0 31 58244.0 32 78581.0 33 119492.0 34 236246.0 35 275698.0 36 252669.0 37 403560.0 38 690746.0 39 1058535.0 40 1003.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.64692877871393 22.162591647594848 25.36514722673423 10.82533234695699 2 30.594510809731496 24.207102324112252 26.90892093329201 18.289465932864243 3 32.08627181417759 23.559445012331185 26.630769909364094 17.723513264127135 4 28.701124119713878 26.06398835294393 25.927488313423748 19.307399213918444 5 26.097558304107643 29.714261693458983 24.06947736559364 20.118702636839735 6 27.66015960232337 33.818055009131086 22.84183550072661 15.679949887818934 7 82.90747748459823 5.658194546451902 6.695251450479438 4.73907651847043 8 84.2891148397242 4.199026589828779 6.602504839371928 4.909353731075088 9 78.66875309537744 6.886102839502774 8.505157309560834 5.93998675555895 10 46.1546568242175 22.94799233042068 15.125897677959966 15.77145316740186 11 32.72128858879208 22.655335772039308 22.964481274687163 21.65889436448145 12 28.97335451733426 20.289601515206684 29.208492191137946 21.528551776321105 13 26.347882384390147 21.73352385908791 30.974141368570535 20.944452387951408 14 21.54524794250835 23.97498416972541 31.863567455619723 22.616200432146513 15 20.054493444534536 22.72765622238583 34.58045405875215 22.637396274327486 16 25.317012534853987 22.530380953818817 29.403043971603495 22.7495625397237 17 26.1574158360768 22.622298677243275 26.449539538090498 24.770745948589425 18 26.109636381775008 22.5161418475492 28.90662905884836 22.46759271182743 19 26.510285164005786 24.943805855558622 25.799336356997188 22.7465726234384 20 25.770710128800268 26.490776700322467 26.398118898609567 21.340394272267698 21 25.755938166162966 24.329008019784364 29.206271956272623 20.708781857780043 22 24.71864443708313 22.029703190122262 28.519568113993373 24.732084258801233 23 23.69259989798761 22.94583130181843 28.645588644949214 24.715980155244743 24 23.988335182048896 24.20067844456858 27.670165460783103 24.140820912599416 25 24.60473158692619 24.800733920837082 25.48077705852036 25.113757433716366 26 22.404419629126046 25.048926575648878 25.700106660082927 26.846547135142146 27 22.19104025700255 24.889543315450084 27.798139798420436 25.12127662912694 28 20.671718737094885 25.522132633278478 26.64453536552911 27.16161326409753 29 22.248825569764072 24.894723863469174 26.357355386482205 26.49909518028455 30 24.4064498118869 25.02506645162952 25.937138934305025 24.631344802178553 31 24.88794474634705 26.3404519983742 24.748188362357723 24.023414892921032 32 25.99039496794129 25.287971862815535 23.198257204440115 25.523375964803062 33 25.553275127656107 24.80798668806381 24.25810851975165 25.38062966452843 34 23.129104289168126 25.02820438357251 26.226124704375724 25.616566622883635 35 22.795180965423246 26.792758245138202 24.943006571007107 25.46905421843144 36 24.615329508016675 26.819430666653645 24.561185380434285 24.0040544448954 37 23.375372740429974 28.104206575388368 25.29261955446695 23.227801129714706 38 23.471760536716616 27.059156825845665 24.600646354773996 24.868436282663726 39 23.450091044431044 24.068974112357502 25.709224424596535 26.771710418614923 40 25.408160576858464 23.14402426746311 26.285153348661833 25.162661807016594 41 21.958655674431864 25.092176750825406 25.987641876708285 26.96152569803444 42 21.57710091204288 24.880988010435694 28.58957952007995 24.95233155744147 43 21.939265623274693 23.711457092777103 28.594730464967505 25.7545468189807 44 22.52327620224978 23.36957052664859 26.799566965391868 27.307586305709762 45 23.04920543714796 22.822297433911746 25.47228095976905 28.656216169171238 46 23.34295731139623 24.060033966633128 26.47828417881357 26.118724543157075 47 20.619439606799368 25.397177815057987 29.069209457253226 24.914173120889423 48 21.563572280930167 24.849727103531922 27.96871304234047 25.617987573197443 49 22.87019530073969 23.62371341089946 28.645470232423065 24.86062105593778 50 21.842581795672675 23.441417326890505 27.809596210325516 26.906404667111307 51 21.562536171326347 23.770811371510124 26.209813378898474 28.456839078265055 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1073.0 1 2011.5 2 2950.0 3 4913.0 4 6876.0 5 5129.5 6 3383.0 7 3512.0 8 3641.0 9 3839.5 10 4038.0 11 4193.5 12 4349.0 13 4292.0 14 4235.0 15 4204.5 16 4174.0 17 4559.5 18 4945.0 19 5584.0 20 6223.0 21 6644.5 22 7066.0 23 8734.5 24 10403.0 25 11557.5 26 16028.5 27 19345.0 28 25072.5 29 30800.0 30 34233.5 31 37667.0 32 46548.5 33 55430.0 34 67540.0 35 79650.0 36 84491.5 37 89333.0 38 98091.5 39 106850.0 40 115755.0 41 124660.0 42 135942.0 43 147224.0 44 164662.5 45 182101.0 46 208306.0 47 234511.0 48 267167.0 49 299823.0 50 303790.5 51 307758.0 52 275717.5 53 243677.0 54 225501.5 55 207326.0 56 206196.0 57 205066.0 58 200483.0 59 195900.0 60 192334.0 61 188768.0 62 169613.0 63 150458.0 64 135108.5 65 119759.0 66 104296.0 67 88833.0 68 76984.0 69 65135.0 70 55480.5 71 45826.0 72 39214.0 73 32602.0 74 27876.0 75 16676.5 76 10203.0 77 7789.5 78 5376.0 79 3865.5 80 2355.0 81 1960.5 82 1566.0 83 965.0 84 364.0 85 337.0 86 310.0 87 193.0 88 76.0 89 51.5 90 27.0 91 19.0 92 11.0 93 10.0 94 9.0 95 5.0 96 1.0 97 2.0 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3378021.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.03011726833262 #Duplication Level Percentage of deduplicated Percentage of total 1 67.88331006223802 12.239440409847353 2 12.229312009488853 4.409918592842249 3 5.35169985612122 2.8947532797235325 4 2.862039039878262 2.0641159806220464 5 1.774455971680372 1.5996824628445108 6 1.24579664624497 1.347711577457538 7 0.863820504433521 1.0902349495608636 8 0.6802952246501055 0.9812642142022469 9 0.5050721962361343 0.8195859834400626 >10 3.71798601186241 14.358284276083882 >50 1.4094927339953598 18.922379922033347 >100 1.4647937991728397 36.776023104472664 >500 0.008566523153478502 1.0439671923048928 >1k 0.0030234787600512364 1.0581710335973125 >5k 3.3594208445013736E-4 0.39446702096751557 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCAACCGATTCGTATGCCGTCTTCTGC 7593 0.22477657776550233 No Hit CCTGTCTCTTATACACATCTGACGCCAACCGATTCGTATGCCGTCTTCTGC 5432 0.16080421051260485 No Hit CTGTCTCTTATACACATCTGACGCCAACCGATTCGTATGCCGTCTTCTGCT 4117 0.12187609254057331 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.480156576883329E-4 0.0 0.0 0.12998735058189395 0.0 2 1.480156576883329E-4 0.0 0.0 0.6947262909259593 0.0 3 1.480156576883329E-4 0.0 0.0 1.029922549326958 0.0 4 1.480156576883329E-4 0.0 0.0 1.460174463095404 0.0 5 1.776187892259995E-4 0.0 0.0 2.639622429819116 0.0 6 1.776187892259995E-4 0.0 0.0 3.3175637451632185 0.0 7 1.776187892259995E-4 0.0 0.0 4.027210014384162 0.0 8 1.776187892259995E-4 0.0 0.0 5.083745778963482 0.0 9 1.776187892259995E-4 0.0 0.0 5.467076729244726 0.0 10 1.776187892259995E-4 0.0 0.0 6.336076655532929 0.0 11 1.776187892259995E-4 0.0 0.0 7.695896502715644 0.0 12 1.776187892259995E-4 0.0 0.0 8.69538703282188 0.0 13 2.0722192076366605E-4 0.0 0.0 9.090411220060503 0.0 14 2.0722192076366605E-4 0.0 0.0 9.25829057901061 0.0 15 2.0722192076366605E-4 0.0 0.0 9.567051240948473 0.0 16 2.3682505230133264E-4 0.0 0.0 10.201002302827602 0.0 17 2.3682505230133264E-4 0.0 0.0 10.955734141380411 0.0 18 3.256344469143324E-4 0.0 0.0 11.781809526938998 0.0 19 3.256344469143324E-4 0.0 0.0 12.312179231567832 0.0 20 3.55237578451999E-4 0.0 0.0 12.834319265629196 0.0 21 3.55237578451999E-4 0.0 0.0 13.491893626475383 0.0 22 3.55237578451999E-4 0.0 0.0 14.156602342022149 0.0 23 3.55237578451999E-4 0.0 0.0 14.797273314760329 0.0 24 3.55237578451999E-4 0.0 0.0 15.340194747161133 0.0 25 3.55237578451999E-4 0.0 0.0 15.804727087250198 0.0 26 3.55237578451999E-4 0.0 0.0 16.252060007915876 0.0 27 3.55237578451999E-4 0.0 0.0 16.76898989082661 0.0 28 3.8484070998966554E-4 0.0 0.0 17.235061593755635 0.0 29 3.8484070998966554E-4 0.0 0.0 17.747314181883418 0.0 30 3.8484070998966554E-4 0.0 0.0 18.28760093557737 0.0 31 4.144438415273321E-4 0.0 0.0 18.75062351595801 0.0 32 4.144438415273321E-4 0.0 0.0 19.204765156877354 0.0 33 4.440469730649987E-4 0.0 0.0 19.664028139552716 0.0 34 4.440469730649987E-4 0.0 0.0 20.150407590716576 0.0 35 4.440469730649987E-4 0.0 0.0 20.675123097221718 0.0 36 4.440469730649987E-4 0.0 0.0 21.12985680077181 0.0 37 4.440469730649987E-4 0.0 0.0 21.625354016449275 0.0 38 4.440469730649987E-4 0.0 0.0 22.16001617515107 0.0 39 4.736501046026653E-4 0.0 0.0 22.987778939207306 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTCAG 155 0.0 40.64516 1 CCGGTAT 360 0.0 40.625 42 TACGGGT 255 0.0 40.588234 4 AATAGCG 140 0.0 40.17857 1 ATACGAC 40 3.460882E-7 39.375004 10 GTAACGA 40 3.460882E-7 39.375004 37 TCGTTAC 30 1.1403907E-4 37.499996 38 TACCGGT 385 0.0 37.4026 40 TAGGGAC 2205 0.0 37.346943 5 TGTAGCG 275 0.0 36.818184 1 GCGCTAA 25 0.0021076861 36.0 44 CGTTTTT 2275 0.0 35.901096 1 GCCCGGT 460 0.0 35.70652 31 ACCGGTA 410 0.0 35.67073 41 AACGGGC 725 0.0 35.068966 4 CGCTTAA 45 8.7065746E-7 35.0 19 ATAACGG 310 0.0 34.838707 2 CGGTCTA 285 0.0 34.736843 31 GTACGAG 255 0.0 34.411766 1 AGGGCGA 2270 0.0 34.196033 6 >>END_MODULE