##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935048.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2351230 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.32651931116905 33.0 31.0 34.0 30.0 34.0 2 32.494159227298056 34.0 31.0 34.0 31.0 34.0 3 32.50451976199691 34.0 31.0 34.0 31.0 34.0 4 36.01533027394172 37.0 35.0 37.0 35.0 37.0 5 35.940693169107234 37.0 35.0 37.0 35.0 37.0 6 35.88296040795669 37.0 35.0 37.0 35.0 37.0 7 36.14777882214841 37.0 35.0 37.0 35.0 37.0 8 35.912955346775945 37.0 35.0 37.0 35.0 37.0 9 37.645903633417404 39.0 38.0 39.0 35.0 39.0 10 37.46292536246985 39.0 37.0 39.0 35.0 39.0 11 37.390257865032346 39.0 37.0 39.0 35.0 39.0 12 37.12047056221637 39.0 37.0 39.0 34.0 39.0 13 36.97437809146702 39.0 37.0 39.0 33.0 39.0 14 37.89118418870123 40.0 37.0 41.0 33.0 41.0 15 38.04744665558027 40.0 37.0 41.0 33.0 41.0 16 38.17769890652978 40.0 37.0 41.0 33.0 41.0 17 38.231357629836296 40.0 37.0 41.0 34.0 41.0 18 38.25642153255956 40.0 37.0 41.0 34.0 41.0 19 38.21543362410313 40.0 37.0 41.0 34.0 41.0 20 38.16109738307184 40.0 36.0 41.0 34.0 41.0 21 38.09940584289925 40.0 36.0 41.0 34.0 41.0 22 38.08641306890436 40.0 36.0 41.0 34.0 41.0 23 37.874708556797934 40.0 36.0 41.0 34.0 41.0 24 37.66960612105154 40.0 35.0 41.0 33.0 41.0 25 37.60654933800606 39.0 35.0 41.0 33.0 41.0 26 37.7680307753814 40.0 35.0 41.0 34.0 41.0 27 37.79917532525529 40.0 35.0 41.0 34.0 41.0 28 37.77774058684178 40.0 36.0 41.0 34.0 41.0 29 37.799191487008926 40.0 36.0 41.0 34.0 41.0 30 37.69703601944514 40.0 35.0 41.0 33.0 41.0 31 37.58215146965631 40.0 35.0 41.0 33.0 41.0 32 37.50224690906462 40.0 35.0 41.0 33.0 41.0 33 37.43296104592065 40.0 35.0 41.0 33.0 41.0 34 37.272851231057786 39.0 35.0 41.0 33.0 41.0 35 37.17904160800943 39.0 35.0 41.0 32.0 41.0 36 37.132213352160356 39.0 35.0 41.0 32.0 41.0 37 37.061470804642674 39.0 35.0 41.0 32.0 41.0 38 37.01543702657758 39.0 35.0 41.0 32.0 41.0 39 36.93365685194558 39.0 35.0 41.0 32.0 41.0 40 36.78752440212144 39.0 35.0 41.0 31.0 41.0 41 36.69607311917592 39.0 35.0 41.0 31.0 41.0 42 36.74467831730626 39.0 35.0 41.0 31.0 41.0 43 36.71663469758382 39.0 35.0 41.0 32.0 41.0 44 36.60918795694169 39.0 35.0 41.0 31.0 41.0 45 36.56258851749935 38.0 35.0 41.0 31.0 41.0 46 36.43233881840568 38.0 35.0 40.0 31.0 41.0 47 36.35262181921803 38.0 35.0 40.0 31.0 41.0 48 36.310252931444396 38.0 35.0 40.0 31.0 41.0 49 36.26652135265372 38.0 35.0 40.0 31.0 41.0 50 36.18653640860315 38.0 35.0 40.0 31.0 41.0 51 35.18481007812932 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 9.0 9 39.0 10 34.0 11 42.0 12 34.0 13 36.0 14 65.0 15 96.0 16 211.0 17 358.0 18 586.0 19 1074.0 20 1676.0 21 2646.0 22 4232.0 23 5959.0 24 8282.0 25 10877.0 26 13728.0 27 16910.0 28 20247.0 29 25126.0 30 31809.0 31 41533.0 32 57194.0 33 86487.0 34 172601.0 35 194011.0 36 171495.0 37 272560.0 38 487796.0 39 722823.0 40 651.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.19237165228412 21.802163123131297 24.80463417020028 10.2008310543843 2 31.724246458236756 24.13438923457084 25.18469056621428 18.956673740978125 3 32.322018688090914 24.3750292400148 25.693785805727217 17.60916626616707 4 28.227395873649115 26.1447837940142 26.226102933358288 19.40171739897841 5 26.480352836600417 29.568311054214174 24.20533082684382 19.746005282341585 6 27.34891950170762 33.11841036393717 23.181143486600632 16.35152664775458 7 81.84643782190598 5.560196152652016 7.769550405532423 4.823815619909579 8 82.09694500325362 4.532904054473616 7.702223942362083 5.667926999910685 9 76.34106403882224 7.109130114876043 9.68667463412767 6.8631312121740535 10 42.28131658748825 27.464646163922712 16.191014915597368 14.063022332991668 11 34.09555849491543 24.049454966124113 22.481297023260165 19.373689515700292 12 29.597657396341486 22.466241073820935 27.69176133342974 20.244340196407837 13 26.384190402470196 24.68163471884928 29.69815798539488 19.236016893285644 14 20.603684029210243 27.22068874589045 30.809788918991337 21.36583830590797 15 19.276804055749544 24.618688941532728 34.62213394691289 21.482373055804835 16 24.319568906487245 25.50992459266001 29.125606597397958 21.044899903454787 17 24.965018309565632 24.930313070180286 25.705354218855664 24.399314401398417 18 26.947725233175827 23.09986687818716 28.711270271304805 21.241137617332203 19 25.785567554003645 25.297865372592216 25.915244361461877 23.001322711942258 20 25.8282260774148 27.5697826244136 26.922419329457348 19.679571968714246 21 24.27223198070797 26.61976922717046 29.06657366569838 20.04142512642319 22 23.930283298528852 23.1614516657239 29.08809431659174 23.820170719155506 23 21.39475933872909 26.39001713996504 29.37143537637747 22.843788144928396 24 23.307843128915504 25.148539275187883 28.261463149075166 23.28215444682145 25 22.489675616592166 27.47672494821859 26.025697188280176 24.007902246909065 26 21.997167440020753 25.389391935284937 26.550443810261008 26.062996814433298 27 21.709062916005664 26.29487544816968 27.80297971699919 24.193081918825467 28 18.159856755825672 26.349527694015475 27.643403665315603 27.847211884843254 29 20.550009994768693 26.75348647303752 26.851180020670036 25.845323511523755 30 23.887752367909563 25.7043334765208 27.089906134236124 23.318008021333515 31 23.78627356745193 27.066514122395514 25.021499385428054 24.125712924724507 32 24.44597083228778 26.6006728393224 25.557304049369904 23.396052279019916 33 24.493265227136433 26.27981949873045 24.21213577574291 25.014779498390205 34 20.507479064149404 26.161753635331298 28.28047447506199 25.050292825457316 35 20.164807356149762 28.616809074399356 26.826469549980224 24.391914019470658 36 23.277773760967662 28.884966591953997 23.86316949001161 23.974090157066726 37 20.46847820077151 29.62164484121077 25.927578331341465 23.98229862667625 38 22.359828685411465 28.00908460678028 25.17142091586106 24.459665791947195 39 23.10850065710288 25.187114829259578 25.56678844689801 26.137596066739537 40 25.548415084870474 24.781242158359667 26.449688035623907 23.22065472114595 41 20.521046431016956 26.815624162672304 24.32518298932899 28.33814641698175 42 21.667595258651854 24.86285901421809 27.30073195731596 26.168813769814097 43 22.04122948414234 23.662636152141644 28.07339137387665 26.22274298983936 44 22.55330188879863 23.796736176384275 26.47903437775122 27.170927557065877 45 22.10634433892048 23.272372332779014 26.201605117321574 28.419678210978933 46 22.83107139667323 24.439123352458076 26.680843643539763 26.04896160732893 47 19.087541414493693 26.49383514160673 29.75408615915925 24.664537284740327 48 20.29703601944514 26.09842507963917 27.887871454515295 25.716667446400393 49 23.16600247530016 23.191563564602358 29.080693934663987 24.561740025433494 50 21.2378202047439 24.96506084049625 27.643956567413653 26.153162387346196 51 20.224690906461724 24.59448884201035 25.61586914083267 29.564951110695254 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1095.0 1 1721.0 2 2347.0 3 3408.0 4 4469.0 5 3435.5 6 2402.0 7 2516.5 8 2631.0 9 2664.5 10 2698.0 11 2833.0 12 2968.0 13 3117.0 14 3266.0 15 3542.0 16 3818.0 17 3695.5 18 3573.0 19 4135.5 20 4698.0 21 5233.5 22 5769.0 23 6501.0 24 7233.0 25 8963.0 26 12332.5 27 13972.0 28 19701.0 29 25430.0 30 28998.0 31 32566.0 32 35597.0 33 38628.0 34 46170.5 35 53713.0 36 59309.5 37 64906.0 38 69829.0 39 74752.0 40 81272.5 41 87793.0 42 101675.5 43 115558.0 44 129061.5 45 142565.0 46 164582.5 47 186600.0 48 213536.0 49 240472.0 50 245569.5 51 250667.0 52 223583.5 53 196500.0 54 177765.0 55 159030.0 56 148394.5 57 137759.0 58 126383.5 59 115008.0 60 107483.5 61 99959.0 62 88222.0 63 76485.0 64 65497.0 65 54509.0 66 48246.0 67 41983.0 68 35256.5 69 28530.0 70 25041.0 71 21552.0 72 18065.5 73 14579.0 74 12079.0 75 7619.0 76 5659.0 77 4046.0 78 2433.0 79 1942.5 80 1452.0 81 1055.0 82 658.0 83 400.5 84 143.0 85 108.0 86 73.0 87 51.5 88 30.0 89 22.0 90 14.0 91 11.5 92 9.0 93 5.5 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2351230.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.507751188633282 #Duplication Level Percentage of deduplicated Percentage of total 1 66.36457367733425 12.946235910371584 2 12.718154026303418 4.962051686476833 3 5.68689100846925 3.328153644902818 4 3.2705983460901678 2.552080750939301 5 2.0068047118941235 1.9574123501903729 6 1.3418808032224836 1.5706246100440555 7 0.9459630997669468 1.2917528948717316 8 0.7206331623574036 1.124634594363696 9 0.568868459424917 0.9987609928970168 >10 3.9622942522493516 16.13524316597627 >50 1.239507340491305 17.871621653039597 >100 1.1591970362447674 31.68196721605092 >500 0.00909086548812628 1.1710217623961545 >1k 0.005099753810412304 1.7579816602913203 >5k 4.434568530793308E-4 0.6504571071884673 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCACTGAACTCGTATGCCGTCTTCTGC 8920 0.37937590112409253 Illumina PCR Primer Index 5 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCCACTGAACTCGTATGCCGTCTTCTGC 6118 0.2602042335288339 Illumina PCR Primer Index 5 (95% over 23bp) CTGTCTCTTATACACATCTGACGCCACTGAACTCGTATGCCGTCTTCTGCT 4572 0.19445141479140707 Illumina PCR Primer Index 5 (95% over 24bp) TCTGTCTCTTATACACATCTGACGCCACTGAACTCGTATGCCGTCTTCTGC 2839 0.1207453120281725 Illumina PCR Primer Index 5 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.1265465309646442E-4 0.0 0.0 0.20716816304657562 0.0 2 2.1265465309646442E-4 0.0 0.0 1.1201371197203167 0.0 3 2.1265465309646442E-4 0.0 0.0 1.6195778379826729 0.0 4 2.1265465309646442E-4 0.0 0.0 2.2501839462749285 0.0 5 2.1265465309646442E-4 0.0 0.0 3.920245998902702 0.0 6 2.1265465309646442E-4 0.0 0.0 4.767036827532824 0.0 7 2.1265465309646442E-4 0.0 0.0 5.675880283936493 0.0 8 2.1265465309646442E-4 0.0 0.0 7.035253888390332 0.0 9 2.1265465309646442E-4 0.0 0.0 7.497054733054614 0.0 10 2.1265465309646442E-4 0.0 0.0 8.678478923797332 0.0 11 2.1265465309646442E-4 0.0 0.0 10.339311764480719 0.0 12 2.5518558371575727E-4 0.0 0.0 11.703661487817016 0.0 13 2.5518558371575727E-4 0.0 0.0 12.22415501673592 0.0 14 2.9771651433505014E-4 0.0 0.0 12.437787881236629 0.0 15 2.9771651433505014E-4 0.0 0.0 12.853017356872785 0.0 16 2.9771651433505014E-4 0.0 0.0 13.64787791921675 0.0 17 2.9771651433505014E-4 0.0 0.0 14.609204544004628 0.0 18 6.80494889908686E-4 0.0 0.0 15.63573108543188 0.0 19 6.80494889908686E-4 0.0 0.0 16.290622355107754 0.0 20 6.80494889908686E-4 0.0 0.0 16.96856538917928 0.0 21 6.80494889908686E-4 0.0 0.0 17.770698740659146 0.0 22 6.80494889908686E-4 0.0 0.0 18.587845510647618 0.0 23 6.80494889908686E-4 0.0 0.0 19.371137659863134 0.0 24 6.80494889908686E-4 0.0 0.0 19.969632915537826 0.0 25 6.80494889908686E-4 0.0 0.0 20.528489343875332 0.0 26 6.80494889908686E-4 0.0 0.0 21.062422646869937 0.0 27 6.80494889908686E-4 0.0 0.0 21.72143941681588 0.0 28 6.80494889908686E-4 0.0 0.0 22.28752610335867 0.0 29 6.80494889908686E-4 0.0 0.0 22.885425926004686 0.0 30 6.80494889908686E-4 0.0 0.0 23.58050892511579 0.0 31 6.80494889908686E-4 0.0 0.0 24.106361351292726 0.0 32 7.23025820527979E-4 0.0 0.0 24.613500167997177 0.0 33 7.23025820527979E-4 0.0 0.0 25.15338780127848 0.0 34 7.655567511472719E-4 0.0 0.0 25.711351080072983 0.0 35 7.655567511472719E-4 0.0 0.0 26.325497718215573 0.0 36 7.655567511472719E-4 0.0 0.0 26.839739200333444 0.0 37 7.655567511472719E-4 0.0 0.0 27.38536850924835 0.0 38 7.655567511472719E-4 0.0 0.0 28.00304521463234 0.0 39 7.655567511472719E-4 0.0 0.0 28.98049106212493 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTCGCG 20 7.034793E-4 45.000004 1 TCCAACG 20 7.034793E-4 45.000004 21 CGTAACG 20 7.034793E-4 45.000004 39 CGCCGAT 20 7.034793E-4 45.000004 40 TGCGTAC 45 3.8562575E-10 45.0 24 TCGTGAA 30 2.1664746E-6 44.999996 32 GTCGTAC 25 3.892056E-5 44.999996 31 CGTACTA 30 2.1664746E-6 44.999996 15 GCGCTTA 25 3.892056E-5 44.999996 18 GCCCGTA 25 3.892056E-5 44.999996 36 GTACGAC 30 2.1664746E-6 44.999996 34 ACCCGTA 75 0.0 42.0 33 TCGTTAG 110 0.0 40.909092 1 ATTCGAC 50 1.0822987E-9 40.499996 11 ATTAGCG 85 0.0 39.705883 1 CCGTACA 40 3.4602817E-7 39.375004 35 CGTAGAC 40 3.4602817E-7 39.375004 35 TCGTAGA 40 3.4602817E-7 39.375004 20 CGCGTAA 40 3.4602817E-7 39.375004 31 GTCAACG 115 0.0 39.130432 1 >>END_MODULE