##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935047.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1229529 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.17520204891466 33.0 31.0 34.0 30.0 34.0 2 32.33907130291355 34.0 31.0 34.0 30.0 34.0 3 32.36309106983243 34.0 31.0 34.0 30.0 34.0 4 35.90560613047761 37.0 35.0 37.0 35.0 37.0 5 35.82903615937485 37.0 35.0 37.0 35.0 37.0 6 35.766391032663726 37.0 35.0 37.0 35.0 37.0 7 36.0687442101813 37.0 35.0 37.0 35.0 37.0 8 35.84214687087494 37.0 35.0 37.0 35.0 37.0 9 37.55108094237712 39.0 38.0 39.0 35.0 39.0 10 37.35837544295417 39.0 37.0 39.0 34.0 39.0 11 37.271418567597834 39.0 37.0 39.0 34.0 39.0 12 37.10268647587816 39.0 37.0 39.0 34.0 39.0 13 36.97544100220491 39.0 37.0 39.0 33.0 39.0 14 38.03769166892363 40.0 37.0 41.0 33.0 41.0 15 38.14122725043492 40.0 37.0 41.0 33.0 41.0 16 38.20225712447612 40.0 37.0 41.0 34.0 41.0 17 38.228905540251596 40.0 37.0 41.0 34.0 41.0 18 38.24119967890143 40.0 37.0 41.0 34.0 41.0 19 38.220380324498244 40.0 37.0 41.0 34.0 41.0 20 38.17459531251398 40.0 36.0 41.0 34.0 41.0 21 38.08220627573648 40.0 36.0 41.0 34.0 41.0 22 37.98857123337473 40.0 36.0 41.0 34.0 41.0 23 37.796736799213356 40.0 36.0 41.0 33.0 41.0 24 37.554777479831706 39.0 35.0 41.0 33.0 41.0 25 37.511557677777425 39.0 35.0 41.0 33.0 41.0 26 37.70232259670166 39.0 36.0 41.0 33.0 41.0 27 37.71015567749927 39.0 36.0 41.0 33.0 41.0 28 37.72665955825361 40.0 36.0 41.0 33.0 41.0 29 37.781029158319974 40.0 36.0 41.0 34.0 41.0 30 37.661891667459656 40.0 36.0 41.0 33.0 41.0 31 37.59687083427882 40.0 36.0 41.0 33.0 41.0 32 37.55708324081823 40.0 36.0 41.0 33.0 41.0 33 37.476934663598826 40.0 35.0 41.0 33.0 41.0 34 37.39032507569972 40.0 35.0 41.0 33.0 41.0 35 37.340150577985554 40.0 35.0 41.0 33.0 41.0 36 37.25460806536487 39.0 35.0 41.0 33.0 41.0 37 37.172000009759834 39.0 35.0 41.0 33.0 41.0 38 37.120648638625035 39.0 35.0 41.0 32.0 41.0 39 37.08878684439326 39.0 35.0 41.0 32.0 41.0 40 37.01987509038014 39.0 35.0 41.0 32.0 41.0 41 36.98607678224751 39.0 35.0 41.0 32.0 41.0 42 36.952655854396276 39.0 35.0 41.0 32.0 41.0 43 36.83307429104966 39.0 35.0 41.0 32.0 41.0 44 36.695363834443924 39.0 35.0 41.0 31.0 41.0 45 36.73540518361096 39.0 35.0 41.0 31.0 41.0 46 36.63152068800329 39.0 35.0 41.0 31.0 41.0 47 36.56176552159404 39.0 35.0 41.0 31.0 41.0 48 36.53615164831411 39.0 35.0 41.0 31.0 41.0 49 36.49103355837886 39.0 35.0 41.0 31.0 41.0 50 36.40409132277482 39.0 35.0 40.0 31.0 41.0 51 35.390012760984085 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 6.0 9 12.0 10 15.0 11 14.0 12 9.0 13 12.0 14 21.0 15 41.0 16 83.0 17 169.0 18 293.0 19 515.0 20 957.0 21 1506.0 22 2393.0 23 3609.0 24 5066.0 25 6272.0 26 7577.0 27 8658.0 28 10401.0 29 12540.0 30 16191.0 31 21125.0 32 28135.0 33 40660.0 34 77613.0 35 114998.0 36 87937.0 37 135669.0 38 260363.0 39 386376.0 40 292.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.19531056201196 22.783439837531283 25.911385579356 11.109864021100762 2 28.74336432894222 25.64372210822193 26.272174141480193 19.340739421355657 3 29.63411192415958 24.87285781791239 27.963390859426656 17.529639398501377 4 28.07668627580155 26.588474123017843 27.252386889613827 18.082452711566788 5 24.31752321417388 29.93739879254576 25.46064387257234 20.28443412070801 6 25.143855899291516 32.599231087676664 25.638110203175362 16.618802809856454 7 78.41636919503323 6.7634028965563235 8.892104212263394 5.928123696147061 8 78.3251147390586 4.699523150734956 9.21035616077376 7.765005949432668 9 72.12298367911615 7.939869657405396 12.029647125037311 7.907499538441143 10 39.34262632276262 29.01867300405277 17.674898274054538 13.963802399130074 11 28.054157323658085 23.894678368708668 27.09696151941109 20.954202788222158 12 24.94442994024541 21.351753394999225 33.55447492495094 20.14934173980443 13 21.561183184780514 25.9234227090211 33.65654653123269 18.858847574965697 14 16.69330288264856 30.96852534588448 31.074744881983264 21.263426889483696 15 15.985308195252005 26.129517888557324 38.818767186459205 19.066406729731465 16 18.26170834522813 26.16091202403522 33.57952516776749 21.99785446296915 17 18.108397605912508 25.75864416374075 28.431537605050387 27.701420625296354 18 19.952843731217403 25.202170912601492 32.994260403780636 21.850724952400473 19 20.239457548378283 27.563644289805282 28.500100444967135 23.696797716849296 20 21.655690919042982 28.440321456427625 29.06747217837074 20.83651544615865 21 20.888161238978505 28.76142002343987 30.26459725634776 20.08582148123387 22 18.13190254154233 26.325283909529585 29.000047985854742 26.54276556307334 23 18.783615514558825 26.88118783696847 28.998502678668007 25.336693969804696 24 20.815694465116316 24.982574628170624 30.476223008973353 23.725507897739703 25 17.44806344543317 27.886776155747445 28.316452885617178 26.348707513202207 26 17.24343224112648 28.730188551876367 27.95062174214679 26.075757464850362 27 19.47794643314635 28.910176173152486 28.285546741882463 23.326330651818704 28 15.511386880667313 26.529020462307113 32.1966378995534 25.762954757472173 29 17.18235194127182 24.910921173880404 31.523127962008218 26.383598922839557 30 19.540084048444566 27.610247501278945 28.380135808102125 24.46953264217436 31 18.985562764278026 27.653028110764367 28.893177794098392 24.468231330859215 32 19.918358981366037 26.564237199773245 27.22449002829539 26.29291379056533 33 21.14720352264973 25.944406353977822 26.881594496754445 26.026795626618 34 16.692896222862576 23.517298087316362 32.95945032610048 26.83035536372058 35 16.877601097656093 24.55810314356148 28.208769374288856 30.355526384493576 36 22.107408609312998 25.113031087514 28.47309823517786 24.306462067995145 37 19.309101290006172 24.9135237965107 33.67443956181595 22.10293535166718 38 18.3586560382065 25.73985648162833 29.088862483113452 26.812624997051714 39 21.97532551082569 22.859566549467317 30.558042957913152 24.60706498179384 40 21.2103984533915 21.36891443796771 30.758770228274408 26.66191688036638 41 18.72196589100379 23.68557390675616 27.208955624470832 30.38350457776921 42 21.881793760049582 22.552538411050087 28.24780871374323 27.317859115157106 43 22.904949781583028 22.82825374594662 29.7080426732513 24.55875379921905 44 19.136352212920556 23.284526025819645 30.02434265478895 27.55477910647085 45 19.789935820952575 21.76199178709896 29.421835515876403 29.02623687607206 46 21.92555035302136 22.396137057360992 29.94634530783739 25.73196728178026 47 17.572094680158013 22.4343630772434 33.45004469191048 26.543497550688112 48 18.915942608917724 21.09816035246017 31.78900213008396 28.196894908538145 49 22.05397351343482 18.530673127677346 34.30240360333103 25.1129497555568 50 19.36473234872866 19.638414384695277 33.06046461693868 27.936388649637383 51 18.32669257902823 19.804900901076756 29.078939984335467 32.789466535559555 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1683.0 1 1760.5 2 1838.0 3 2204.5 4 2571.0 5 2080.5 6 1590.0 7 1711.5 8 1833.0 9 2025.0 10 2217.0 11 2283.0 12 2349.0 13 2570.5 14 2792.0 15 2848.5 16 2905.0 17 3086.5 18 3268.0 19 3743.0 20 4218.0 21 4334.5 22 4451.0 23 4363.5 24 4276.0 25 5281.5 26 7877.0 27 9467.0 28 11020.5 29 12574.0 30 14767.5 31 16961.0 32 18649.0 33 20337.0 34 23281.5 35 26226.0 36 28929.0 37 31632.0 38 35016.5 39 38401.0 40 45015.0 41 51629.0 42 62759.5 43 73890.0 44 85875.5 45 97861.0 46 115700.0 47 133539.0 48 154749.5 49 175960.0 50 168888.5 51 161817.0 52 129830.0 53 97843.0 54 83849.0 55 69855.0 56 58806.0 57 47757.0 58 41955.0 59 36153.0 60 33033.0 61 29913.0 62 25998.0 63 22083.0 64 18587.5 65 15092.0 66 11362.5 67 7633.0 68 5910.5 69 4188.0 70 3397.0 71 2606.0 72 2162.0 73 1718.0 74 1356.0 75 818.5 76 643.0 77 458.5 78 274.0 79 197.5 80 121.0 81 92.5 82 64.0 83 37.0 84 10.0 85 7.5 86 5.0 87 4.0 88 3.0 89 1.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 1.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1229529.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.798022408604158 #Duplication Level Percentage of deduplicated Percentage of total 1 64.05549501985506 13.322276208171774 2 12.554869618253054 5.22232919315061 3 6.2246022947188715 3.883782540306359 4 3.7663277330349283 3.1332867435923095 5 2.44241577488302 2.539870900857267 6 1.6795835559242884 2.095920985994184 7 1.2846285168926248 1.8702412876745318 8 0.9701732705406083 1.6142148336745883 9 0.7378062088044184 1.3810419057529417 >10 4.362012561330817 17.278599833570826 >50 0.9948502547222299 15.399519723451691 >100 0.910627993588645 27.14490407458843 >500 0.01067605550451274 1.5372627601377633 >1k 0.004744913557561217 1.6654707868351781 >5k 0.0011862283893903042 1.9112782222415747 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGC 9935 0.8080329947483955 No Hit CCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGC 7459 0.6066550687295704 No Hit CTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGCT 5847 0.4755479537286229 No Hit TCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGC 3677 0.2990576066119628 No Hit ACTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGC 2730 0.22203624314676593 No Hit GCCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTG 1805 0.1468041827398947 No Hit ACCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTG 1691 0.1375323396194803 No Hit AGCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTG 1676 0.13631236026153104 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1399 0.11378340811806797 No Hit CGCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTG 1388 0.11288875658890518 No Hit GGCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTG 1316 0.10703285567074872 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.6266391439323513E-4 0.0 0.0 0.5022248356891135 0.0 2 1.6266391439323513E-4 0.0 0.0 2.5444702808961805 0.0 3 1.6266391439323513E-4 0.0 0.0 3.5536372057918113 0.0 4 1.6266391439323513E-4 0.0 0.0 4.765727363893003 0.0 5 1.6266391439323513E-4 0.0 0.0 7.763704638117523 0.0 6 1.6266391439323513E-4 0.0 0.0 9.206126898999536 0.0 7 1.6266391439323513E-4 0.0 0.0 10.771035087419655 0.0 8 1.6266391439323513E-4 0.0 0.0 13.20212861998375 0.0 9 1.6266391439323513E-4 0.0 0.0 14.037082492564226 0.0 10 1.6266391439323513E-4 0.0 0.0 15.899014988666393 0.0 11 1.6266391439323513E-4 0.0 0.0 18.733108369139728 0.0 12 1.6266391439323513E-4 0.0 0.0 20.95265748103542 0.0 13 2.439958715898527E-4 0.0 0.0 21.782568772269705 0.0 14 2.439958715898527E-4 0.0 0.0 22.092362197231623 0.0 15 2.439958715898527E-4 0.0 0.0 22.664288520238237 0.0 16 2.439958715898527E-4 0.0 0.0 23.88979845127687 0.0 17 2.439958715898527E-4 0.0 0.0 25.411275374553995 0.0 18 3.2532782878647026E-4 0.0 0.0 27.238072465147223 0.0 19 3.2532782878647026E-4 0.0 0.0 28.263099121696193 0.0 20 4.0665978598308783E-4 0.0 0.0 29.203459210803487 0.0 21 4.0665978598308783E-4 0.0 0.0 30.233203120869863 0.0 22 4.0665978598308783E-4 0.0 0.0 31.32345800709052 0.0 23 4.0665978598308783E-4 0.0 0.0 32.3483219997251 0.0 24 4.0665978598308783E-4 0.0 0.0 33.174329357013946 0.0 25 4.0665978598308783E-4 0.0 0.0 33.858656444866284 0.0 26 4.0665978598308783E-4 0.0 0.0 34.495892329501785 0.0 27 4.0665978598308783E-4 0.0 0.0 35.12971227193503 0.0 28 4.879917431797054E-4 0.0 0.0 35.78549184281135 0.0 29 4.879917431797054E-4 0.0 0.0 36.4407834219445 0.0 30 4.879917431797054E-4 0.0 0.0 37.1765936387023 0.0 31 4.879917431797054E-4 0.0 0.0 37.846931629916824 0.0 32 4.879917431797054E-4 0.0 0.0 38.49246337418638 0.0 33 4.879917431797054E-4 0.0 0.0 39.102046393375026 0.0 34 4.879917431797054E-4 0.0 0.0 39.71537068259472 0.0 35 4.879917431797054E-4 0.0 0.0 40.376030170902844 0.0 36 4.879917431797054E-4 0.0 0.0 40.970322782138524 0.0 37 4.879917431797054E-4 0.0 0.0 41.5695766427632 0.0 38 4.879917431797054E-4 0.0 0.0 42.1829009319829 0.0 39 4.879917431797054E-4 0.0 0.0 42.81883550530325 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAG 30 2.1656251E-6 45.000004 1 CTCCCGG 30 2.1656251E-6 45.000004 2 TTCGTTC 30 2.1656251E-6 45.000004 14 GTTAGGT 75 0.0 45.000004 10 AGGCGTA 30 2.1656251E-6 45.000004 42 GGAACGT 60 0.0 45.000004 8 TTACGCG 30 2.1656251E-6 45.000004 1 GCGGATA 30 2.1656251E-6 45.000004 1 GGCGAGT 30 2.1656251E-6 45.000004 2 CCTGCGT 30 2.1656251E-6 45.000004 43 CCGTTAG 30 2.1656251E-6 45.000004 45 GTACGAG 75 0.0 45.000004 1 CGAACTT 20 7.0334796E-4 45.0 24 AAATCCG 20 7.0334796E-4 45.0 1 CGAACCG 20 7.0334796E-4 45.0 2 CGTATTA 35 1.212029E-7 45.0 45 GCGACCG 45 3.8562575E-10 45.0 14 GATCGTC 35 1.212029E-7 45.0 20 ATTAGCG 20 7.0334796E-4 45.0 1 CGTATAG 20 7.0334796E-4 45.0 14 >>END_MODULE