##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935045.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1105299 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.026774655545694 33.0 31.0 34.0 30.0 34.0 2 32.19772115961382 34.0 31.0 34.0 30.0 34.0 3 32.21853091335467 34.0 31.0 34.0 30.0 34.0 4 35.80316909723071 37.0 35.0 37.0 35.0 37.0 5 35.713786043414494 37.0 35.0 37.0 33.0 37.0 6 35.64415330150484 37.0 35.0 37.0 33.0 37.0 7 35.993814343449145 37.0 35.0 37.0 35.0 37.0 8 35.796802494166734 37.0 35.0 37.0 35.0 37.0 9 37.55974808626444 39.0 37.0 39.0 35.0 39.0 10 37.261944505513895 39.0 37.0 39.0 34.0 39.0 11 37.17880682059786 39.0 37.0 39.0 34.0 39.0 12 37.06214788939464 39.0 37.0 39.0 34.0 39.0 13 36.92134345548128 39.0 37.0 39.0 33.0 39.0 14 37.95012661732255 40.0 37.0 41.0 33.0 41.0 15 38.0301990683064 40.0 37.0 41.0 33.0 41.0 16 38.09930435113033 40.0 37.0 41.0 34.0 41.0 17 38.14808029320573 40.0 37.0 41.0 34.0 41.0 18 38.156930387162205 40.0 37.0 41.0 34.0 41.0 19 38.120475093164835 40.0 37.0 41.0 34.0 41.0 20 38.07338919152193 40.0 36.0 41.0 34.0 41.0 21 37.987723683817684 40.0 36.0 41.0 34.0 41.0 22 37.9155920705619 40.0 36.0 41.0 34.0 41.0 23 37.70359423106327 39.0 36.0 41.0 33.0 41.0 24 37.44817194261462 39.0 35.0 41.0 33.0 41.0 25 37.42258701039266 39.0 35.0 41.0 33.0 41.0 26 37.61788529619587 39.0 36.0 41.0 33.0 41.0 27 37.59289929693232 39.0 36.0 41.0 33.0 41.0 28 37.6130956419937 39.0 36.0 41.0 33.0 41.0 29 37.526057654987476 39.0 36.0 41.0 33.0 41.0 30 37.35433850930834 39.0 35.0 41.0 33.0 41.0 31 37.27434115112743 39.0 35.0 41.0 33.0 41.0 32 37.06664169604786 39.0 35.0 41.0 32.0 41.0 33 37.064644951275625 39.0 35.0 41.0 32.0 41.0 34 37.048854653808604 39.0 35.0 41.0 32.0 41.0 35 36.86725582851337 39.0 35.0 41.0 31.0 41.0 36 36.8773345492939 39.0 35.0 41.0 31.0 41.0 37 36.760710902660726 39.0 35.0 40.0 31.0 41.0 38 36.60692898482673 39.0 35.0 40.0 31.0 41.0 39 36.6628966460659 39.0 35.0 40.0 31.0 41.0 40 36.69505717457448 39.0 35.0 40.0 31.0 41.0 41 36.68973734708889 39.0 35.0 41.0 31.0 41.0 42 36.69867610483679 39.0 35.0 41.0 31.0 41.0 43 36.542453218540864 39.0 35.0 40.0 31.0 41.0 44 36.36690524464421 39.0 35.0 40.0 31.0 41.0 45 36.35121084882914 39.0 35.0 40.0 31.0 41.0 46 36.240352158103825 39.0 35.0 40.0 30.0 41.0 47 36.197969961069354 38.0 35.0 40.0 30.0 41.0 48 36.18100532073222 39.0 35.0 40.0 30.0 41.0 49 36.17351142089154 39.0 35.0 40.0 30.0 41.0 50 36.09176521466137 38.0 35.0 40.0 30.0 41.0 51 35.01639918248365 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 4.0 9 13.0 10 23.0 11 6.0 12 15.0 13 22.0 14 25.0 15 32.0 16 66.0 17 146.0 18 241.0 19 507.0 20 987.0 21 1553.0 22 2399.0 23 3482.0 24 4870.0 25 5957.0 26 7093.0 27 8299.0 28 10324.0 29 12484.0 30 15947.0 31 20714.0 32 28040.0 33 40169.0 34 72710.0 35 103169.0 36 88453.0 37 142103.0 38 259801.0 39 275496.0 40 148.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.60928219422979 23.31332969630842 26.464151329187846 10.613236780273935 2 28.959765638076213 25.57688010212621 26.18893168273924 19.274422577058335 3 29.652519363538737 25.04833533731596 28.1805194793445 17.118625819800794 4 28.594525101352662 25.769950031620404 27.542502074099406 18.093022792927524 5 22.96925990161938 28.562316622018113 27.542683020612525 20.925740455749985 6 24.003097804304538 32.057208049586585 26.863771703403334 17.075922442705547 7 76.08818971156222 6.3165713530908825 10.894880027938141 6.700358907408764 8 75.38412682902998 4.332402363523355 10.811101792365687 9.472369015080988 9 70.20806134810582 6.243107068766008 14.190549344566492 9.358282238561692 10 36.83781492609692 22.94817963284143 22.816179151523706 17.397826289537942 11 26.193093452540893 25.349249388626973 26.09502044243232 22.362636716399816 12 23.88512067775326 22.600038541607294 32.75095698087124 20.763883799768205 13 21.419453016785504 27.16097635119547 33.04047140185597 18.37909923016306 14 16.40415851276442 31.801892519580676 29.524680652022667 22.26926831563224 15 15.086053637974883 26.880780675636185 37.810221487579376 20.222944198809554 16 15.66273017527384 27.801255587854506 32.334689527449136 24.20132470942252 17 16.090035365995988 27.390687949595538 26.89046131408786 29.62881537032061 18 17.830288455883885 26.77981252131776 33.05277576474782 22.337123258050536 19 18.65667118128217 28.029519614149656 29.46469688292489 23.849112321643283 20 20.573347121457633 29.09737546130052 28.530198615940122 21.79907880130173 21 19.86512246912374 29.302025967634098 30.335411504036465 20.497440059205697 22 17.12767314545657 27.70182547889756 26.517711497070025 28.65278987857584 23 16.564024757101926 27.707344347547586 28.012420168660245 27.716210726690242 24 20.763702853255094 25.18069771165992 29.937872014721805 24.117727420363178 25 17.22791751372253 27.862325036030978 27.044356323492558 27.865401126753937 26 18.967446817557963 29.232994872880553 28.507761248313805 23.291797061247678 27 21.227016400087216 30.43710344440735 26.83672019969257 21.49915995581286 28 18.634957599708315 26.9389549796028 28.919233619138353 25.506853801550534 29 21.331874904437623 23.919048148962407 30.559604233786512 24.189472712813455 30 22.746967110257042 28.416383259190496 27.6015811106316 21.235068519920855 31 23.728873363678062 29.32545854108255 22.555344752867775 24.390323342371612 32 21.730771492600645 30.219877155412245 25.272618540322572 22.776732811664534 33 20.69494317827122 27.241226129762175 26.33902681536851 25.724803876598095 34 20.054392521842505 23.989345869307762 27.884400510631057 28.07186109821867 35 19.4724685356632 26.330522329252087 27.07964089355007 27.117368241534646 36 22.67865980155596 26.06344527589367 26.574981068471065 24.682913854079302 37 20.74696530079191 26.33251274089635 29.271265060404474 23.649256897907264 38 18.13970699331131 28.104250524066337 28.879606332766066 24.876436149856282 39 20.035935977504728 21.425695671487986 32.66989294299552 25.868475408011772 40 22.08931700833892 22.219146131499258 30.358844077484914 25.3326927826769 41 18.933790766118488 26.66834946923864 24.171920901041258 30.225938863601616 42 22.62926140347544 24.22638580148901 26.16622289534325 26.9781298996923 43 24.333325190740243 22.90312395107568 28.345271279536128 24.41827957864795 44 21.777636639497548 22.188385224269634 28.40326463698963 27.630713499243193 45 21.80830707347062 20.89669854039495 28.604658106087133 28.6903362800473 46 24.15789754627481 22.409863756322952 29.92149635528486 23.510742342117382 47 17.899138604124314 23.626819530280947 32.00572876660524 26.468313098989505 48 18.838522426963202 21.344360213842588 30.93868717876339 28.878430180430815 49 21.687525275966053 17.733029705084324 34.52577085476419 26.053674164185438 50 20.35928739644205 18.267726651340496 32.99812991778695 28.3748560344305 51 18.374213674308944 18.94329045805705 27.936060740125523 34.746435127508484 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1964.0 1 1847.5 2 1731.0 3 1925.5 4 2120.0 5 1756.5 6 1393.0 7 1543.0 8 1693.0 9 1801.5 10 1910.0 11 2131.5 12 2353.0 13 2487.5 14 2622.0 15 2614.5 16 2607.0 17 2649.5 18 2692.0 19 2930.5 20 3169.0 21 3271.0 22 3373.0 23 3262.0 24 3151.0 25 3269.5 26 4599.0 27 5810.0 28 5802.0 29 5794.0 30 7330.5 31 8867.0 32 10371.0 33 11875.0 34 14021.5 35 16168.0 36 19294.0 37 22420.0 38 25111.0 39 27802.0 40 33312.0 41 38822.0 42 50198.5 43 61575.0 44 77984.5 45 94394.0 46 116938.5 47 139483.0 48 164866.0 49 190249.0 50 180283.5 51 170318.0 52 135990.5 53 101663.0 54 82888.5 55 64114.0 56 50367.0 57 36620.0 58 30655.0 59 24690.0 60 22029.5 61 19369.0 62 15663.5 63 11958.0 64 9827.5 65 7697.0 66 6073.0 67 4449.0 68 3921.5 69 3394.0 70 2330.0 71 1266.0 72 1036.0 73 806.0 74 572.5 75 446.0 76 553.0 77 433.0 78 313.0 79 242.5 80 172.0 81 114.5 82 57.0 83 37.0 84 17.0 85 40.5 86 64.0 87 37.0 88 10.0 89 6.5 90 3.0 91 2.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1105299.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.65340669013367 #Duplication Level Percentage of deduplicated Percentage of total 1 62.44112182367492 13.52063005036214 2 12.390359946937334 5.365870059363543 3 6.335246994909951 4.115390389896971 4 3.999394027371651 3.464020215550798 5 2.655977851404549 2.875548428822506 6 1.9013933801612741 2.470298648313601 7 1.4234054176875404 2.157510347588953 8 1.108445823409134 1.9201302566606453 9 0.8507215276866286 1.6578917297145341 >10 5.3580350959394005 22.691538163581388 >50 1.0177434800896727 16.025693966268204 >100 0.4924156792016149 15.797185983834765 >500 0.017299951025934984 2.4174676773508397 >1k 0.006751200400364872 2.4660746845828077 >5k 0.0012658500750684135 1.989506733977646 >10k+ 4.219500250228045E-4 1.0652426641306716 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCTGC 11659 1.0548276982065488 TruSeq Adapter, Index 19 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCTGC 9398 0.850267665129526 TruSeq Adapter, Index 19 (95% over 21bp) CTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCTGCT 7303 0.6607261926410862 TruSeq Adapter, Index 13 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCTGC 5074 0.45906130377391097 TruSeq Adapter, Index 19 (95% over 21bp) ACTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCTGC 3807 0.3444316877152698 TruSeq Adapter, Index 13 (95% over 21bp) GCCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCTG 2281 0.20636949820817713 No Hit ACCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCTG 2047 0.18519875617366885 No Hit AGCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCTG 2005 0.18139887939824428 No Hit CGCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCTG 1840 0.1664707920662192 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1711 0.1547997419702723 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCC 1693 0.1531712233522332 No Hit AAAACTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTC 1605 0.14520957677515314 No Hit GGCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCTG 1588 0.14367153141367178 No Hit CGTTCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTC 1475 0.13344805342264854 No Hit GGCCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCT 1282 0.11598671490700707 No Hit AGCCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCT 1212 0.1096535869479661 No Hit TGCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCTG 1193 0.10793459507336929 No Hit TTGTCTGGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAAGAAAGAAA 1173 0.10612512994221472 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.6925727789494065 0.0 2 0.0 0.0 0.0 3.566365300249073 0.0 3 0.0 0.0 0.0 4.993399975934114 0.0 4 0.0 0.0 0.0 6.670321786231598 0.0 5 0.0 0.0 0.0 10.684982072724214 0.0 6 0.0 0.0 0.0 12.821417553078398 0.0 7 0.0 0.0 0.0 15.01331313970247 0.0 8 0.0 0.0 0.0 18.260579264072437 0.0 9 0.0 0.0 0.0 19.363629208024253 0.0 10 0.0 0.0 0.0 21.818349604948526 0.0 11 0.0 0.0 0.0 25.80460128888201 0.0 12 0.0 0.0 0.0 28.545850489324607 0.0 13 0.0 0.0 0.0 29.600406767761484 0.0 14 0.0 0.0 0.0 29.97722788132442 0.0 15 0.0 0.0 0.0 30.67369101030581 0.0 16 0.0 0.0 0.0 32.35314607178691 0.0 17 0.0 0.0 0.0 34.40797467472603 0.0 18 0.0 0.0 0.0 36.83772445284036 0.0 19 0.0 0.0 0.0 38.1001882748469 0.0 20 0.0 0.0 0.0 39.182519843047 0.0 21 0.0 0.0 0.0 40.63895832711329 0.0 22 0.0 0.0 0.0 41.94394457970196 0.0 23 0.0 0.0 0.0 43.282044044190755 0.0 24 0.0 0.0 0.0 44.34365723663914 0.0 25 0.0 0.0 0.0 45.25942753951646 0.0 26 0.0 0.0 0.0 46.07323448225322 0.0 27 0.0 0.0 0.0 46.78978267419042 0.0 28 0.0 0.0 0.0 47.53030627911542 0.0 29 0.0 0.0 0.0 48.283948506241295 0.0 30 0.0 0.0 0.0 49.1941999404686 0.0 31 0.0 0.0 0.0 49.99787387847089 0.0 32 0.0 0.0 0.0 50.78707209542395 0.0 33 0.0 0.0 0.0 51.509048682754624 0.0 34 0.0 0.0 0.0 52.174298538223596 0.0 35 0.0 0.0 0.0 52.94829724807496 0.0 36 0.0 0.0 0.0 53.61390899657016 0.0 37 0.0 0.0 0.0 54.27128767871861 0.0 38 9.047325655772782E-5 0.0 0.0 54.914190639817825 0.0 39 9.047325655772782E-5 0.0 0.0 55.52759931927922 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGCCGAT 20 7.033167E-4 45.000004 36 AGTCCGC 20 7.033167E-4 45.000004 39 AGTCCAT 20 7.033167E-4 45.000004 25 TCGCACG 35 1.2118653E-7 45.000004 1 GCGACCG 20 7.033167E-4 45.000004 10 TCCGCAA 20 7.033167E-4 45.000004 39 CGTATAC 20 7.033167E-4 45.000004 24 ATAGGCG 20 7.033167E-4 45.000004 1 CTATCCA 20 7.033167E-4 45.000004 31 GAGTCGA 20 7.033167E-4 45.000004 20 GCGAAAG 55 1.8189894E-12 45.000004 1 CGGTTTA 20 7.033167E-4 45.000004 19 TTTCGCG 20 7.033167E-4 45.000004 1 TTTCGCA 20 7.033167E-4 45.000004 15 CGTTGAT 20 7.033167E-4 45.000004 25 ATTACGC 40 6.8139343E-9 45.000004 12 TAGCGAT 20 7.033167E-4 45.000004 29 GATCCGT 20 7.033167E-4 45.000004 7 TTGTCCG 20 7.033167E-4 45.000004 1 TTGTCAA 20 7.033167E-4 45.000004 30 >>END_MODULE