##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935044.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 673385 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.09274783370583 33.0 31.0 34.0 30.0 34.0 2 32.27555707359089 34.0 31.0 34.0 30.0 34.0 3 32.28042353185771 34.0 31.0 34.0 30.0 34.0 4 35.847227069210035 37.0 35.0 37.0 35.0 37.0 5 35.75603703676203 37.0 35.0 37.0 35.0 37.0 6 35.68282483274798 37.0 35.0 37.0 33.0 37.0 7 35.99941192631258 37.0 35.0 37.0 35.0 37.0 8 35.70621115706468 37.0 35.0 37.0 35.0 37.0 9 37.4309897012853 39.0 37.0 39.0 35.0 39.0 10 37.289171870475286 39.0 37.0 39.0 34.0 39.0 11 37.1845363350832 39.0 37.0 39.0 34.0 39.0 12 36.9224366447129 39.0 35.0 39.0 33.0 39.0 13 36.67351515106514 39.0 35.0 39.0 33.0 39.0 14 37.642017567958895 39.0 36.0 41.0 33.0 41.0 15 37.79270402518619 40.0 36.0 41.0 33.0 41.0 16 37.91920075439756 40.0 36.0 41.0 33.0 41.0 17 37.99673143892424 40.0 36.0 41.0 34.0 41.0 18 38.00762862255619 39.0 36.0 41.0 34.0 41.0 19 37.953216956124656 40.0 36.0 41.0 34.0 41.0 20 37.88912731943836 40.0 36.0 41.0 34.0 41.0 21 37.83441567602486 39.0 35.0 41.0 34.0 41.0 22 37.726951149788015 39.0 35.0 41.0 33.0 41.0 23 37.50289061977917 39.0 35.0 41.0 33.0 41.0 24 37.275530342968736 39.0 35.0 41.0 33.0 41.0 25 37.23817281347223 39.0 35.0 41.0 33.0 41.0 26 37.396232467310675 39.0 35.0 41.0 33.0 41.0 27 37.47893701225896 39.0 35.0 41.0 33.0 41.0 28 37.4733013060879 39.0 35.0 41.0 33.0 41.0 29 37.44933433325661 39.0 35.0 41.0 33.0 41.0 30 37.428413166316446 39.0 35.0 41.0 33.0 41.0 31 37.33321057047603 39.0 35.0 41.0 33.0 41.0 32 37.16308649583819 39.0 35.0 41.0 33.0 41.0 33 37.143353356549376 39.0 35.0 41.0 33.0 41.0 34 37.03324992389198 39.0 35.0 41.0 33.0 41.0 35 36.93229875925362 39.0 35.0 41.0 32.0 41.0 36 36.92530276142177 39.0 35.0 41.0 32.0 41.0 37 36.81292277077749 39.0 35.0 41.0 32.0 41.0 38 36.70467117622162 39.0 35.0 41.0 31.0 41.0 39 36.67738960624308 39.0 35.0 41.0 31.0 41.0 40 36.62358680398286 39.0 35.0 41.0 31.0 41.0 41 36.608807740000145 39.0 35.0 41.0 31.0 41.0 42 36.596519078981565 39.0 35.0 41.0 31.0 41.0 43 36.44951105236974 39.0 35.0 40.0 31.0 41.0 44 36.26785716937562 38.0 35.0 40.0 31.0 41.0 45 36.28818580752467 39.0 35.0 40.0 31.0 41.0 46 36.2082419418312 38.0 35.0 40.0 31.0 41.0 47 36.14290933121468 38.0 35.0 40.0 31.0 41.0 48 36.12284799928718 38.0 35.0 40.0 31.0 41.0 49 36.114904549403384 38.0 35.0 40.0 31.0 41.0 50 35.996620061331924 38.0 35.0 40.0 30.0 41.0 51 34.961635617068985 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 4.0 9 2.0 10 11.0 11 12.0 12 10.0 13 5.0 14 10.0 15 25.0 16 52.0 17 105.0 18 180.0 19 384.0 20 640.0 21 1034.0 22 1628.0 23 2334.0 24 3268.0 25 3936.0 26 4607.0 27 5284.0 28 6264.0 29 7446.0 30 9683.0 31 12722.0 32 16901.0 33 25070.0 34 50111.0 35 74319.0 36 47953.0 37 74620.0 38 141502.0 39 183121.0 40 141.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.027643918412195 22.89626291051924 25.1530699377028 10.923023233365758 2 30.996383940836225 24.53128596568085 24.895119433904824 19.5772106595781 3 28.87263601060315 25.873163197873428 27.955924174135156 17.298276617388268 4 28.71982595394908 25.88192490180209 26.738492838420814 18.65975630582802 5 24.695530788479104 30.19312874507154 25.630954060455757 19.4803864059936 6 24.537968621219658 33.055384364071074 26.03874455177944 16.367902462929827 7 75.12433451888593 7.2166739680866065 11.120235823488791 6.538755689538673 8 73.0886491383087 6.139132888317976 11.414718177565582 9.357499795807747 9 67.61302969326611 8.058391559063537 14.86935408421631 9.459224663454043 10 40.30190752689769 24.670136697431634 20.257802000341556 14.77015377532912 11 31.6217319958122 24.130920647178066 24.16938304239031 20.07796431461942 12 30.38425269348144 19.76328549046979 30.83807925629469 19.01438255975408 13 23.024272889951515 29.40071430162537 30.244807947904988 17.33020486051813 14 15.340407047974042 34.68506129480164 28.75591229385864 21.218619363365683 15 13.218738166130816 27.325824008553802 40.07618227314241 19.379255552172978 16 13.03399986634689 26.5340035789333 37.97916496506456 22.45283158965525 17 14.23613534605018 25.11683509433682 29.6301521417911 31.0168774178219 18 16.938601245944 27.14554081246241 33.6297957334957 22.286062208097892 19 19.843922867304737 26.919221544881456 28.490982127609023 24.745873460204788 20 22.336107872910745 27.899344357239915 28.130712742339075 21.633835027510266 21 19.460932453202847 28.900257653496887 30.645618776777027 20.99319111652324 22 16.404285809752224 28.826005925287912 25.817028891347448 28.952679373612423 23 16.030651113404666 30.05115944073598 27.52630367471803 26.39188577114132 24 20.814689961908865 24.64726716514327 30.00779643146194 24.530246441485925 25 16.509723263808965 28.077400001485035 28.00819739079427 27.40467934391173 26 15.468120020493478 32.10867482940665 28.046808289462938 24.37639686063693 27 19.32906138390371 30.323811786719336 26.950407270729226 23.396719558647728 28 17.228628496328252 28.65433592966876 29.41942573713403 24.697609836868953 29 17.423019520779345 29.217015526036366 28.922236165046744 24.437728788137544 30 19.676856478834544 27.85033821662199 27.20969430563496 25.263110998908502 31 21.860451302004055 29.68079182042962 22.195623603139364 26.263133274426963 32 20.817214520667967 31.70222086919073 24.60598320425908 22.87458140588222 33 23.40325371073012 26.148340102615887 25.5121512953214 24.936254891332595 34 20.79538451257453 25.057136704856802 27.70569585007091 26.441782932497755 35 16.627635008204816 27.651046578109106 27.621494390281935 28.099824023404146 36 24.141612896040154 24.61979402570595 27.54353007566251 23.695063002591386 37 21.591214535518315 25.905982461741793 28.728736161334155 23.774066841405734 38 20.9192363952271 28.148087646739977 26.745026990503202 24.187648967529718 39 22.17126903628682 24.758793260913148 29.74821238964337 23.321725313156662 40 22.27670649034356 21.272080607676145 31.8897807346466 24.561432167333695 41 18.496551007224692 24.36050699080021 27.588081112587897 29.554860889387204 42 24.429561098034558 23.108177342827656 28.014286032507407 24.447975526630383 43 26.254965584323976 22.39743980041135 27.482495155074734 23.86509946018994 44 21.47731238444575 24.470251045093075 27.369781031653513 26.682655538807666 45 20.580648514594177 24.308976291423182 26.13898438486156 28.971390809121083 46 22.58886075573409 23.64561135160421 29.63980486645827 24.125723026203435 47 18.459276639663788 22.90725216629417 32.51052518247362 26.12294601156842 48 20.3921976283998 20.286017657060967 31.624256554571307 27.69752815996792 49 22.424912939848678 17.65067531946806 34.29390319059676 25.630508550086507 50 20.057916348002998 20.122069841175552 32.32742042071029 27.492593390111153 51 18.228799275303132 20.211468921939158 27.237464451985122 34.32226735077259 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1651.0 1 1551.5 2 1452.0 3 1600.5 4 1749.0 5 1470.5 6 1192.0 7 1268.0 8 1344.0 9 1472.0 10 1600.0 11 1665.5 12 1731.0 13 1868.5 14 2006.0 15 2068.5 16 2131.0 17 2182.0 18 2233.0 19 2036.0 20 1839.0 21 2079.0 22 2319.0 23 2198.5 24 2078.0 25 2560.5 26 3328.5 27 3614.0 28 4147.5 29 4681.0 30 5238.5 31 5796.0 32 7652.0 33 9508.0 34 11121.5 35 12735.0 36 12980.0 37 13225.0 38 16830.0 39 20435.0 40 22489.0 41 24543.0 42 33078.0 43 41613.0 44 49883.0 45 58153.0 46 69158.5 47 80164.0 48 91509.0 49 102854.0 50 98688.5 51 94523.0 52 75327.0 53 56131.0 54 45356.0 55 34581.0 56 28502.0 57 22423.0 58 19517.0 59 16611.0 60 15546.5 61 14482.0 62 12963.5 63 11445.0 64 9606.5 65 7768.0 66 5957.5 67 4147.0 68 3528.5 69 2910.0 70 2545.0 71 2180.0 72 1564.5 73 949.0 74 859.5 75 571.5 76 373.0 77 243.5 78 114.0 79 97.5 80 81.0 81 75.5 82 70.0 83 47.0 84 24.0 85 66.5 86 109.0 87 56.5 88 4.0 89 2.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 673385.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.389901510176283 #Duplication Level Percentage of deduplicated Percentage of total 1 64.37563117699072 14.41364041708256 2 12.373020738986332 5.540614314585451 3 6.146447635312702 4.12855071576322 4 3.716087149233508 3.3281130109828 5 2.4871604046750004 2.7843638250341725 6 1.7300770697225583 2.324175311766148 7 1.2673711294460424 1.9863420335596436 8 0.9786441071384504 1.752939613787545 9 0.7089009954157223 1.4285001121041554 >10 4.5323914586614915 19.85746236667543 >50 1.065721331475617 17.3032589240114 >100 0.5984641145346745 18.91000616872015 >500 0.01138019009741551 1.7486865768672613 >1k 0.0073636524159747425 2.644238329398494 >5k 0.0013388458938135893 1.8491082796615586 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTCTGC 6445 0.9571047766136758 No Hit CCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTCTGC 5892 0.8749823652145503 No Hit CTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTCTGCT 3750 0.5568879615673055 TruSeq Adapter, Index 13 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTCTGC 2547 0.3782383034965139 No Hit ACTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTCTGC 2098 0.3115602515648552 TruSeq Adapter, Index 13 (95% over 21bp) AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1434 0.21295395650333762 No Hit GCCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTCTG 1265 0.18785687236870438 No Hit AGCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTCTG 1144 0.16988795414213265 No Hit CGCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTCTG 1126 0.1672148919266096 No Hit AAAACTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTC 1120 0.1663238711881019 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGC 1066 0.1583046845415327 No Hit GAATCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTC 1066 0.1583046845415327 No Hit ACCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTCTG 1026 0.15236454628481477 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCG 975 0.14479087000749943 No Hit GGCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTCTG 924 0.13721719373018407 No Hit AGACATAGACCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCC 908 0.1348411384274969 No Hit AGGCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTCT 851 0.12637644141167387 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCC 845 0.12548542067316618 No Hit CGTTCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTC 823 0.12221834463197132 No Hit GGCCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTCT 795 0.11806024785226876 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.4850345641794814E-4 0.0 0.0 0.5861431424816412 0.0 2 1.4850345641794814E-4 0.0 0.0 3.235147798065 0.0 3 1.4850345641794814E-4 0.0 0.0 4.485398397647705 0.0 4 1.4850345641794814E-4 0.0 0.0 5.930782538963594 0.0 5 1.4850345641794814E-4 0.0 0.0 9.646636025453493 0.0 6 1.4850345641794814E-4 0.0 0.0 11.518225086688894 0.0 7 1.4850345641794814E-4 0.0 0.0 13.429613074244303 0.0 8 1.4850345641794814E-4 0.0 0.0 16.32483646056862 0.0 9 1.4850345641794814E-4 0.0 0.0 17.358420517237537 0.0 10 1.4850345641794814E-4 0.0 0.0 19.62948387623722 0.0 11 1.4850345641794814E-4 0.0 0.0 23.128373812900495 0.0 12 1.4850345641794814E-4 0.0 0.0 25.743074170051308 0.0 13 1.4850345641794814E-4 0.0 0.0 26.75126413567276 0.0 14 1.4850345641794814E-4 0.0 0.0 27.13024495645136 0.0 15 1.4850345641794814E-4 0.0 0.0 27.884345508141703 0.0 16 1.4850345641794814E-4 0.0 0.0 29.48476725795793 0.0 17 1.4850345641794814E-4 0.0 0.0 31.180231219881644 0.0 18 8.910207385076888E-4 0.0 0.0 33.365756587984585 0.0 19 8.910207385076888E-4 0.0 0.0 34.47002828990845 0.0 20 8.910207385076888E-4 0.0 0.0 35.45787328200064 0.0 21 8.910207385076888E-4 0.0 0.0 36.762327643175894 0.0 22 8.910207385076888E-4 0.0 0.0 37.99312428996785 0.0 23 8.910207385076888E-4 0.0 0.0 39.2213963780007 0.0 24 8.910207385076888E-4 0.0 0.0 40.05702532726449 0.0 25 8.910207385076888E-4 0.0 0.0 40.79092940888199 0.0 26 8.910207385076888E-4 0.0 0.0 41.524090973217405 0.0 27 8.910207385076888E-4 0.0 0.0 42.17839720219488 0.0 28 8.910207385076888E-4 0.0 0.0 42.80805185740698 0.0 29 8.910207385076888E-4 0.0 0.0 43.41246092502803 0.0 30 8.910207385076888E-4 0.0 0.0 44.157057255507624 0.0 31 8.910207385076888E-4 0.0 0.0 44.89853501340244 0.0 32 8.910207385076888E-4 0.0 0.0 45.585512002791866 0.0 33 8.910207385076888E-4 0.0 0.0 46.199276788167246 0.0 34 8.910207385076888E-4 0.0 0.0 46.74888808037007 0.0 35 8.910207385076888E-4 0.0 0.0 47.45279446379114 0.0 36 8.910207385076888E-4 0.0 0.0 48.01621657744084 0.0 37 8.910207385076888E-4 0.0 0.0 48.6082998581792 0.0 38 8.910207385076888E-4 0.0 0.0 49.13474461118083 0.0 39 8.910207385076888E-4 0.0 0.0 49.65539772938215 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGGTCAC 45 3.8380676E-10 45.000004 15 TTCTAAC 30 2.1641572E-6 45.000004 31 AGCGTGT 30 2.1641572E-6 45.000004 43 TTTACGG 30 2.1641572E-6 45.000004 2 CACGGCC 30 2.1641572E-6 45.000004 41 GGGTCTA 30 2.1641572E-6 45.000004 7 CCGGCTA 30 2.1641572E-6 45.000004 19 TAGAACG 30 2.1641572E-6 45.000004 1 TAGCGCA 30 2.1641572E-6 45.000004 1 CGCGCAA 30 2.1641572E-6 45.000004 18 TGAGTCG 30 2.1641572E-6 45.000004 1 TTATCGT 30 2.1641572E-6 45.000004 27 GTAATTT 30 2.1641572E-6 45.000004 9 AATATCG 30 2.1641572E-6 45.000004 23 GACCACG 45 3.8380676E-10 45.000004 10 ATATCGT 30 2.1641572E-6 45.000004 24 CGGATTC 30 2.1641572E-6 45.000004 5 ACTACTA 30 2.1641572E-6 45.000004 19 ACCACGA 45 3.8380676E-10 45.000004 11 GTTCACC 30 2.1641572E-6 45.000004 14 >>END_MODULE