##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935043.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1377403 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.37602212279195 33.0 31.0 34.0 31.0 34.0 2 32.543808892531814 34.0 31.0 34.0 31.0 34.0 3 32.54417697652757 34.0 31.0 34.0 31.0 34.0 4 36.04545002443003 37.0 35.0 37.0 35.0 37.0 5 35.971733036736524 37.0 35.0 37.0 35.0 37.0 6 35.916310622236196 37.0 35.0 37.0 35.0 37.0 7 36.159740468112815 37.0 35.0 37.0 35.0 37.0 8 35.93941569751191 37.0 36.0 37.0 35.0 37.0 9 37.65705026052651 39.0 38.0 39.0 35.0 39.0 10 37.489032621534875 39.0 37.0 39.0 35.0 39.0 11 37.40922373481109 39.0 37.0 39.0 35.0 39.0 12 37.15369721134628 39.0 37.0 39.0 34.0 39.0 13 36.99825613854478 39.0 37.0 39.0 33.0 39.0 14 38.08747621429603 40.0 37.0 41.0 33.0 41.0 15 38.19261755637239 40.0 37.0 41.0 33.0 41.0 16 38.29206484957562 40.0 37.0 41.0 34.0 41.0 17 38.33122985792829 40.0 37.0 41.0 34.0 41.0 18 38.31612825004737 40.0 37.0 41.0 34.0 41.0 19 38.28443237019231 40.0 37.0 41.0 34.0 41.0 20 38.267688541407274 40.0 37.0 41.0 34.0 41.0 21 38.1822502201607 40.0 36.0 41.0 34.0 41.0 22 38.13201437778196 40.0 36.0 41.0 34.0 41.0 23 37.94727832014305 40.0 36.0 41.0 34.0 41.0 24 37.74319207958746 40.0 35.0 41.0 33.0 41.0 25 37.693653926991594 40.0 35.0 41.0 33.0 41.0 26 37.84769962022734 40.0 36.0 41.0 34.0 41.0 27 37.8612439496647 40.0 36.0 41.0 34.0 41.0 28 37.845196358654654 40.0 36.0 41.0 34.0 41.0 29 37.87338854351268 40.0 36.0 41.0 34.0 41.0 30 37.78726705256196 40.0 36.0 41.0 34.0 41.0 31 37.6994372743489 40.0 35.0 41.0 33.0 41.0 32 37.6131705826109 40.0 35.0 41.0 33.0 41.0 33 37.51493644198539 40.0 35.0 41.0 33.0 41.0 34 37.40977114177913 40.0 35.0 41.0 33.0 41.0 35 37.32641862984181 40.0 35.0 41.0 33.0 41.0 36 37.257955732635985 39.0 35.0 41.0 33.0 41.0 37 37.23177748269751 39.0 35.0 41.0 33.0 41.0 38 37.1484670789885 39.0 35.0 41.0 33.0 41.0 39 37.11020884955238 39.0 35.0 41.0 33.0 41.0 40 37.02206761565061 39.0 35.0 41.0 32.0 41.0 41 36.942740795540594 39.0 35.0 41.0 32.0 41.0 42 36.91651245133051 39.0 35.0 41.0 32.0 41.0 43 36.865538988952395 39.0 35.0 41.0 32.0 41.0 44 36.76125723553673 39.0 35.0 41.0 32.0 41.0 45 36.73191433443952 39.0 35.0 41.0 32.0 41.0 46 36.61408462156682 39.0 35.0 41.0 32.0 41.0 47 36.53825931844202 38.0 35.0 41.0 31.0 41.0 48 36.47225830058451 38.0 35.0 41.0 31.0 41.0 49 36.43194620601233 38.0 35.0 40.0 31.0 41.0 50 36.33706547756902 38.0 35.0 40.0 31.0 41.0 51 35.330569194346175 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 9.0 9 11.0 10 30.0 11 19.0 12 19.0 13 21.0 14 36.0 15 37.0 16 110.0 17 192.0 18 288.0 19 613.0 20 946.0 21 1508.0 22 2386.0 23 3265.0 24 4782.0 25 6302.0 26 7681.0 27 9169.0 28 11113.0 29 13513.0 30 17037.0 31 22387.0 32 30396.0 33 45024.0 34 93520.0 35 130872.0 36 95863.0 37 150453.0 38 277134.0 39 452227.0 40 438.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.46258865415568 21.133175984080186 24.723120248757986 10.681115113006143 2 32.05684901223535 23.863458987674633 25.38639744504695 18.693294555043078 3 32.28423344511374 24.809950319550634 25.868681859993043 17.037134375342582 4 28.514385404997668 26.403528959934018 25.45493221664248 19.627153418425834 5 25.25404692744244 30.124153933162624 24.397289682104656 20.224509457290278 6 26.303703418679937 33.95099328228557 23.105147876111783 16.640155422922703 7 81.65431612970205 6.277320435631402 7.466805285018255 4.601558149648287 8 82.82122225666707 4.458825775753357 7.231362208445895 5.488589759133674 9 77.04034331274144 7.250238310792121 9.144019578874156 6.565398797592281 10 42.321818668900825 27.701478797418037 15.885909933403658 14.09079260027748 11 34.06773471525762 24.38255180219587 21.91479182200126 19.634921660545242 12 30.824457330207643 23.40549570459771 26.740176985239618 19.02986997995503 13 25.336375773829445 27.108914384533794 28.359456164971323 19.195253676665438 14 19.913707172120287 30.050900135980534 28.826349296465885 21.20904339543329 15 18.004389419799434 25.350315049408195 36.04166681791749 20.60362871287488 16 21.408258875579623 25.857791800947144 32.217223281784634 20.5167260416886 17 22.649362604844043 24.01817042652005 27.551268582978256 25.781198385657646 18 24.698145713346058 24.188127948029734 29.574133350951026 21.539592987673178 19 25.503429279593554 26.47881556813801 25.584741720469605 22.433013431798827 20 26.994060561796367 27.34646287252169 25.94215345835605 19.71732310732589 21 24.590697130759843 27.244314118671152 27.693928356479546 20.471060394089456 22 22.91261163218027 25.168160661767107 26.941207475226932 24.978020230825692 23 21.941508766860533 27.138825746713195 27.857569643742607 23.062095842683657 24 22.752600364599175 25.11102415197295 28.78525747366602 23.351118009761848 25 21.544457214047014 27.20750571909601 27.59824103766291 23.64979602919407 26 21.08395291719272 28.251499379629635 25.94026584812143 24.72428185505622 27 21.671072300554016 28.72441834379626 27.00444241808679 22.600066937562936 28 19.497924717747818 27.269506455264004 28.58364618052959 24.64892264645859 29 20.59070584280708 26.006985609875976 27.89684645670149 25.505462090615456 30 22.488189730964724 27.298474012326096 26.968940825597155 23.24439543111203 31 24.946148658018025 27.37114700635907 24.72515305977989 22.95755127584302 32 25.236695433362637 26.4210256548011 25.19908842945747 23.143190482378795 33 23.95805730058668 28.664668219831086 24.087939404807454 23.289335074774776 34 21.70766289894824 26.534935672421216 27.565207858557013 24.192193570073535 35 20.498575943278766 27.547783764083565 27.384868480756904 24.56877181188076 36 24.076105540644242 30.157913116204917 24.54546708552254 21.220514257628306 37 23.24751724803852 28.731750983553834 26.04938423976135 21.9713475286463 38 21.853444489376024 29.308706311805622 25.121769010231574 23.716080188586783 39 22.75020455160908 27.411512825222538 25.298333167562436 24.539949455605946 40 25.123729220859836 24.70743856373189 28.120383068716997 22.048449146691272 41 20.976431734212863 25.648412265691306 27.126991882549987 26.248164117545848 42 22.815036703129003 25.563832807101477 27.127863087273656 24.493267402495857 43 23.02492444114032 26.03392035591617 26.41855724141736 24.522597961526145 44 22.418638553858237 25.577699482286594 26.320546710004262 25.683115253850907 45 22.288320847275635 24.945422654081632 25.240325453044605 27.525931045598128 46 22.74882514412993 26.5758822944338 26.420807853620182 24.254484707816086 47 20.203890945496706 27.452822449203317 29.173161376880984 23.17012522841899 48 21.29601866701321 25.89118798202124 28.220789413120194 24.592003937845348 49 22.75666598664298 24.460815026539073 28.934088280626657 23.84843070619129 50 20.332538843025606 26.467272105549355 28.0417568424056 25.158432209019438 51 20.402816024068482 25.2846116931646 25.696546326674184 28.616025956092734 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 782.0 1 1198.5 2 1615.0 3 2087.0 4 2559.0 5 2054.5 6 1550.0 7 1578.0 8 1606.0 9 1701.5 10 1797.0 11 1821.5 12 1846.0 13 2212.5 14 2579.0 15 2371.0 16 2163.0 17 2344.5 18 2526.0 19 2750.5 20 2975.0 21 3289.0 22 3603.0 23 3762.0 24 3921.0 25 5006.0 26 8399.5 27 10708.0 28 11675.5 29 12643.0 30 14777.0 31 16911.0 32 20133.5 33 23356.0 34 30378.5 35 37401.0 36 38392.5 37 39384.0 38 43932.5 39 48481.0 40 52762.0 41 57043.0 42 69858.0 43 82673.0 44 90087.0 45 97501.0 46 106826.5 47 116152.0 48 126472.0 49 136792.0 50 140176.5 51 143561.0 52 127217.0 53 110873.0 54 97494.0 55 84115.0 56 77291.0 57 70467.0 58 67070.5 59 63674.0 60 59868.5 61 56063.0 62 49125.0 63 42187.0 64 36835.5 65 31484.0 66 26264.5 67 21045.0 68 17910.5 69 14776.0 70 11969.5 71 9163.0 72 8021.0 73 6879.0 74 5322.5 75 3224.5 76 2683.0 77 2074.0 78 1465.0 79 891.5 80 318.0 81 218.5 82 119.0 83 94.5 84 70.0 85 45.0 86 20.0 87 14.5 88 9.0 89 6.5 90 4.0 91 3.0 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1377403.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.8012988014936 #Duplication Level Percentage of deduplicated Percentage of total 1 67.13812831399426 13.294221397184181 2 12.563527407049287 4.9754832037547425 3 5.5573129215094035 3.301260410766272 4 3.1318731250892053 2.4806062223303558 5 1.9605960758145695 1.9411174363120045 6 1.3274328686695167 1.577093692286935 7 0.9308425549994809 1.2902324098083324 8 0.7243175369227339 1.1473942380615145 9 0.5176807393025736 0.9225675902437536 >10 3.661964655109152 14.957262810565734 >50 1.298748222276625 18.99627158919533 >100 1.1782802162446173 32.79386938302255 >500 0.005577217811192236 0.7996313961537506 >1k 0.0037181452074614907 1.5229882203145644 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCAGCAGTATCGTATGCCGTCTTCTGC 4570 0.3317837989317578 TruSeq Adapter, Index 15 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCCAGCAGTATCGTATGCCGTCTTCTGC 4331 0.3144323048519569 TruSeq Adapter, Index 15 (95% over 23bp) CTGTCTCTTATACACATCTGACGCCAGCAGTATCGTATGCCGTCTTCTGCT 2836 0.2058947163611521 TruSeq Adapter, Index 14 (95% over 22bp) ACAATCGGGAAGGGAACTGTGGTGAGCGCCTGTGCTTGCTCACTGTAGAAA 1595 0.11579762785473822 No Hit TCTGTCTCTTATACACATCTGACGCCAGCAGTATCGTATGCCGTCTTCTGC 1558 0.11311141329008285 TruSeq Adapter, Index 15 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.4520078727866861E-4 0.0 0.0 0.22462561792010036 0.0 2 1.4520078727866861E-4 0.0 0.0 1.1325661407736152 0.0 3 1.4520078727866861E-4 0.0 0.0 1.6012742821091577 0.0 4 2.1780118091800293E-4 0.0 0.0 2.159861710770196 0.0 5 2.1780118091800293E-4 0.0 0.0 3.6306004851158304 0.0 6 2.1780118091800293E-4 0.0 0.0 4.404665882098413 0.0 7 2.1780118091800293E-4 0.0 0.0 5.206972832206696 0.0 8 2.1780118091800293E-4 0.0 0.0 6.434355087073282 0.0 9 2.1780118091800293E-4 0.0 0.0 6.870973854420239 0.0 10 2.1780118091800293E-4 0.0 0.0 7.933916217693732 0.0 11 2.1780118091800293E-4 0.0 0.0 9.544483350188724 0.0 12 2.1780118091800293E-4 0.0 0.0 10.779996849142917 0.0 13 2.1780118091800293E-4 0.0 0.0 11.253859618426851 0.0 14 2.1780118091800293E-4 0.0 0.0 11.447267067082038 0.0 15 2.1780118091800293E-4 0.0 0.0 11.836622978169787 0.0 16 2.1780118091800293E-4 0.0 0.0 12.65105419401584 0.0 17 2.1780118091800293E-4 0.0 0.0 13.600376941243775 0.0 18 2.1780118091800293E-4 0.0 0.0 14.69141565685569 0.0 19 2.1780118091800293E-4 0.0 0.0 15.297483742956855 0.0 20 2.1780118091800293E-4 0.0 0.0 15.887216740489167 0.0 21 2.1780118091800293E-4 0.0 0.0 16.645673052839292 0.0 22 2.1780118091800293E-4 0.0 0.0 17.438033749018988 0.0 23 2.1780118091800293E-4 0.0 0.0 18.202951496403013 0.0 24 2.9040157455733723E-4 0.0 0.0 18.815408417144436 0.0 25 2.9040157455733723E-4 0.0 0.0 19.354321139129215 0.0 26 2.9040157455733723E-4 0.0 0.0 19.84459159737564 0.0 27 2.9040157455733723E-4 0.0 0.0 20.374429270155503 0.0 28 2.9040157455733723E-4 0.0 0.0 20.875807588628746 0.0 29 2.9040157455733723E-4 0.0 0.0 21.412469698410703 0.0 30 2.9040157455733723E-4 0.0 0.0 22.037704288432653 0.0 31 2.9040157455733723E-4 0.0 0.0 22.581336036003986 0.0 32 2.9040157455733723E-4 0.0 0.0 23.09454821864044 0.0 33 3.6300196819667155E-4 0.0 0.0 23.598031948529226 0.0 34 3.6300196819667155E-4 0.0 0.0 24.103330688258993 0.0 35 3.6300196819667155E-4 0.0 0.0 24.67302597714685 0.0 36 5.082027554753402E-4 0.0 0.0 25.1995240318193 0.0 37 5.082027554753402E-4 0.0 0.0 25.756441651426634 0.0 38 5.082027554753402E-4 0.0 0.0 26.29027234585666 0.0 39 5.082027554753402E-4 0.0 0.0 27.014243471228102 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGACA 30 2.165816E-6 45.000004 40 ACGTTAG 55 1.8189894E-12 45.000004 1 CGCGACT 30 2.165816E-6 45.000004 35 TCGTCCG 30 2.165816E-6 45.000004 1 CCGGTGC 30 2.165816E-6 45.000004 14 TTCGCTA 30 2.165816E-6 45.000004 9 CGATCTC 30 2.165816E-6 45.000004 11 AGCGTAC 40 6.8175723E-9 45.0 6 AACCGAT 20 7.033775E-4 45.0 28 TCGTTAA 20 7.033775E-4 45.0 30 GTCGCAC 25 3.8912098E-5 45.0 26 TACCCGT 25 3.8912098E-5 45.0 36 CGTATGA 20 7.033775E-4 45.0 34 TCCGATA 25 3.8912098E-5 45.0 18 GCGAAAA 20 7.033775E-4 45.0 44 ACTTCGA 25 3.8912098E-5 45.0 43 TGACGAT 25 3.8912098E-5 45.0 29 CGTTCGA 45 3.8562575E-10 45.0 31 TCGATAG 85 0.0 45.0 1 CGTTCAC 20 7.033775E-4 45.0 41 >>END_MODULE