##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935042.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2437449 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.38412947306795 33.0 31.0 34.0 31.0 34.0 2 32.55643543721325 34.0 31.0 34.0 31.0 34.0 3 32.561949809001135 34.0 31.0 34.0 31.0 34.0 4 36.05060700757226 37.0 35.0 37.0 35.0 37.0 5 35.971406581224876 37.0 35.0 37.0 35.0 37.0 6 35.911523482132345 37.0 35.0 37.0 35.0 37.0 7 36.16848721757871 37.0 35.0 37.0 35.0 37.0 8 35.94197006788655 37.0 36.0 37.0 35.0 37.0 9 37.679496883832236 39.0 38.0 39.0 35.0 39.0 10 37.49584175915065 39.0 37.0 39.0 35.0 39.0 11 37.408813476712744 39.0 37.0 39.0 35.0 39.0 12 37.149642105332255 39.0 37.0 39.0 34.0 39.0 13 37.00810109257671 39.0 37.0 39.0 33.0 39.0 14 37.922362273015764 40.0 37.0 41.0 33.0 41.0 15 38.05213729600086 40.0 37.0 41.0 33.0 41.0 16 38.19017997915034 40.0 37.0 41.0 33.0 41.0 17 38.287101801924884 40.0 37.0 41.0 34.0 41.0 18 38.28409209792697 40.0 37.0 41.0 34.0 41.0 19 38.281832358338576 40.0 37.0 41.0 34.0 41.0 20 38.220658155309096 40.0 37.0 41.0 34.0 41.0 21 38.12791652256109 40.0 36.0 41.0 34.0 41.0 22 38.143650185091055 40.0 36.0 41.0 34.0 41.0 23 37.987097986460434 40.0 36.0 41.0 34.0 41.0 24 37.782552578536006 40.0 35.0 41.0 33.0 41.0 25 37.728134209167045 40.0 35.0 41.0 33.0 41.0 26 37.86503225298252 40.0 36.0 41.0 34.0 41.0 27 37.88994764608408 40.0 36.0 41.0 34.0 41.0 28 37.84792789510673 40.0 36.0 41.0 34.0 41.0 29 37.868448939854744 40.0 36.0 41.0 34.0 41.0 30 37.792321398314385 40.0 36.0 41.0 34.0 41.0 31 37.653242385789405 40.0 35.0 41.0 33.0 41.0 32 37.61896474551878 40.0 35.0 41.0 33.0 41.0 33 37.55451334571513 40.0 35.0 41.0 33.0 41.0 34 37.35540641055464 40.0 35.0 41.0 33.0 41.0 35 37.318896108185236 40.0 35.0 41.0 33.0 41.0 36 37.27372059887202 40.0 35.0 41.0 33.0 41.0 37 37.18508489818659 39.0 35.0 41.0 32.0 41.0 38 37.11232686304411 39.0 35.0 41.0 32.0 41.0 39 37.0419237489687 39.0 35.0 41.0 32.0 41.0 40 36.95839256534188 39.0 35.0 41.0 32.0 41.0 41 36.877277432266276 39.0 35.0 41.0 32.0 41.0 42 36.86107196499291 39.0 35.0 41.0 32.0 41.0 43 36.79843885964383 39.0 35.0 41.0 32.0 41.0 44 36.684461090262815 39.0 35.0 41.0 31.0 41.0 45 36.66727426912317 39.0 35.0 41.0 32.0 41.0 46 36.59413345674104 39.0 35.0 41.0 31.0 41.0 47 36.52556709904494 38.0 35.0 41.0 31.0 41.0 48 36.4375619756557 38.0 35.0 41.0 31.0 41.0 49 36.37547000983405 38.0 35.0 40.0 31.0 41.0 50 36.26395013803366 38.0 35.0 40.0 31.0 41.0 51 35.244766967431936 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 17.0 9 30.0 10 45.0 11 40.0 12 32.0 13 50.0 14 61.0 15 123.0 16 192.0 17 376.0 18 621.0 19 1126.0 20 1862.0 21 2879.0 22 4295.0 23 5990.0 24 8289.0 25 10951.0 26 13851.0 27 17032.0 28 20652.0 29 25197.0 30 32387.0 31 42083.0 32 57072.0 33 87467.0 34 172842.0 35 200594.0 36 166802.0 37 268640.0 38 485047.0 39 810069.0 40 734.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.932118374579325 22.03607131882554 25.673808969951782 10.358001336643351 2 31.072978347444398 24.321370416365635 25.97465629024443 18.630994945945538 3 32.70271501065253 24.083744931688827 26.046986008732905 17.166554048925743 4 29.119911842258034 26.010841662738382 25.11121258331969 19.758033911683896 5 25.409064969154226 30.016422907720326 24.804990791602204 19.769521331523244 6 27.563366454026323 33.235895397196 23.720906570763123 15.479831578014554 7 81.83908668448038 5.987079114270698 7.191945349420645 4.981888851828285 8 83.38746779932626 4.4286054805659525 7.047901309935101 5.136025410172684 9 77.71280547818643 6.862584612026754 9.124416551895035 6.300193357891796 10 43.822947680136075 25.980400000164106 16.12878874593889 14.067863573760928 11 34.45938766308546 23.221532019746874 22.59234962454599 19.726730692621672 12 30.151030852337833 22.11968332465623 27.906224909731442 19.823060913274492 13 28.164938015113343 22.882406975489538 29.44693406918463 19.50572094021249 14 21.82515408527522 25.646321215336197 31.48299718271028 21.0455275166783 15 19.786875540780546 24.62053565018181 35.01164537186214 20.580943437175506 16 25.693296557179245 25.35589462589781 29.008155657820943 19.942653159101994 17 26.761708655237506 23.21689602531171 26.308242757079224 23.71315256237156 18 26.017857194140266 23.220834569256628 29.886984302030523 20.87432393457258 19 26.66406558660304 25.42112675998554 26.125879967129567 21.78892768628185 20 25.99619520244321 28.187297457300648 26.251954399866417 19.564552940389728 21 24.661439070109775 25.685829734283672 30.125758528691264 19.526972666915288 22 23.43109537881613 23.90901307063245 29.34666530458688 23.31322624596453 23 22.342785428536146 25.337268595158296 29.64689722738814 22.673048748917413 24 23.02985621442746 25.182516639322504 28.423445987998107 23.364181158251927 25 23.447547005086054 26.159562723158515 26.428491426897548 23.964398844857882 26 21.61038036077883 25.86852073622874 26.912891305623216 25.608207597369216 27 22.108154878317453 25.563611792492893 28.503201502882725 23.82503182630693 28 20.038573114760556 26.36129002083736 27.614649578309127 25.98548728609296 29 22.69811594006685 25.911680613625148 27.278765627506463 24.111437818801544 30 25.139069576430114 24.66714175353002 27.368777767247643 22.825010902792222 31 23.39749467578604 27.211605247945702 26.578156096804488 22.812743979463775 32 25.950204496586387 24.95949658844144 25.70658914299335 23.38370977197882 33 25.83319692022274 25.110843344824858 26.860090200861634 22.195869534090765 34 21.219726033242132 25.71532778737114 30.18175970040809 22.883186478978637 35 21.8912477758509 26.181552926850983 27.442297254219472 24.484902043078645 36 25.919557701514982 26.53692446488111 25.631141410548487 21.912376423055417 37 23.110842524294867 28.680846245398367 26.442358383703617 21.76595284660315 38 22.668371727982823 27.184691864322087 27.04150938132449 23.105427026370602 39 22.601375454419763 25.02169276157163 28.260611811775345 24.116319972233267 40 24.349432541973187 23.545436232717073 28.24469352999796 23.860437695311777 41 21.62465758257916 24.751369156852103 25.793729427774693 27.83024383279404 42 22.626729831065184 24.165715877542464 27.74737030395303 25.46018398743933 43 22.67144871543979 23.635776584453662 28.560761681577745 25.1320130185288 44 22.426602566863963 24.219214432794285 28.190907789250154 25.163275211091594 45 21.62359089359408 23.969691263283867 27.15351172475814 27.253206118363916 46 21.923863842894765 24.679490729857324 27.596926130556987 25.799719296690927 47 20.24916213631547 26.05375538113823 29.21070348548831 24.48637899705799 48 21.296527640168062 25.27441599803729 28.523304487601585 24.90575187419306 49 23.488368372015167 23.85896074133243 29.299033538753015 23.35363734789938 50 20.91879665995063 25.092422446582475 28.158250695706865 25.830530197760037 51 20.3095531434709 25.106658641883378 26.699963773601006 27.883824441044712 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 664.0 1 1400.0 2 2136.0 3 3229.5 4 4323.0 5 3368.5 6 2414.0 7 2472.5 8 2531.0 9 2604.0 10 2677.0 11 2899.0 12 3121.0 13 3251.0 14 3381.0 15 3406.5 16 3432.0 17 3934.0 18 4436.0 19 4311.5 20 4187.0 21 4990.0 22 5793.0 23 7608.0 24 9423.0 25 11416.5 26 15280.0 27 17150.0 28 19876.5 29 22603.0 30 26970.5 31 31338.0 32 36877.0 33 42416.0 34 50794.5 35 59173.0 36 64355.0 37 69537.0 38 75113.5 39 80690.0 40 92884.5 41 105079.0 42 115386.0 43 125693.0 44 139174.0 45 152655.0 46 172995.5 47 193336.0 48 217742.5 49 242149.0 50 242794.0 51 243439.0 52 216186.0 53 188933.0 54 172064.0 55 155195.0 56 148697.5 57 142200.0 58 133840.5 59 125481.0 60 114779.5 61 104078.0 62 93017.0 63 81956.0 64 73540.0 65 65124.0 66 54910.0 67 44696.0 68 37869.0 69 31042.0 70 26523.0 71 22004.0 72 17400.0 73 12796.0 74 10652.5 75 6362.5 76 4216.0 77 3110.5 78 2005.0 79 1609.5 80 1214.0 81 850.0 82 486.0 83 331.0 84 176.0 85 140.0 86 104.0 87 64.5 88 25.0 89 18.0 90 11.0 91 9.0 92 7.0 93 5.0 94 3.0 95 2.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2437449.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.995647863102153 #Duplication Level Percentage of deduplicated Percentage of total 1 67.19600429393728 12.76431635375133 2 12.573955343741408 4.7770085591216676 3 5.517003761137674 3.1439718211794423 4 3.0249891603648207 2.2984651551996476 5 1.8916756232808614 1.7966802005528766 6 1.2542691565459851 1.4295393133978607 7 0.9153721605805853 1.2171661058253058 8 0.6838028023262768 1.0391421792633924 9 0.5174697858776328 0.8846706449093746 >10 3.8628079944520395 15.356446907118126 >50 1.2439929234844322 17.539788898700547 >100 1.3094279393693362 35.41297467568936 >500 0.005273745658050577 0.6459407849718082 >1k 0.003515830438700385 1.186777925577929 >5k 4.394788048375481E-4 0.5071104747413568 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTCTGC 6425 0.2635952588136203 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 5724 0.23483568271582297 No Hit CCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTCTGC 4805 0.19713232974310438 No Hit CTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTCTGCT 3514 0.14416711898382284 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 2489 0.10211495707192232 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.20529988524888E-5 0.0 0.0 0.1523313923696455 0.0 2 8.20529988524888E-5 0.0 0.0 0.8146631991069352 0.0 3 8.20529988524888E-5 0.0 0.0 1.1899325893587926 0.0 4 8.20529988524888E-5 0.0 0.0 1.644383123503302 0.0 5 8.20529988524888E-5 0.0 0.0 2.9171892417031087 0.0 6 8.20529988524888E-5 0.0 0.0 3.605531849076637 0.0 7 8.20529988524888E-5 0.0 0.0 4.322757112046242 0.0 8 8.20529988524888E-5 0.0 0.0 5.412954281299834 0.0 9 8.20529988524888E-5 0.0 0.0 5.782685094129149 0.0 10 1.2307949827873322E-4 0.0 0.0 6.68063208707136 0.0 11 1.2307949827873322E-4 0.0 0.0 8.075574094063096 0.0 12 1.2307949827873322E-4 0.0 0.0 9.132170560286594 0.0 13 1.2307949827873322E-4 0.0 0.0 9.546045886498549 0.0 14 1.2307949827873322E-4 0.0 0.0 9.715649435126643 0.0 15 1.2307949827873322E-4 0.0 0.0 10.056210406863897 0.0 16 1.2307949827873322E-4 0.0 0.0 10.730932216427913 0.0 17 1.641059977049776E-4 0.0 0.0 11.525861669310824 0.0 18 1.641059977049776E-4 0.0 0.0 12.47816877399281 0.0 19 1.641059977049776E-4 0.0 0.0 13.023575057365303 0.0 20 1.641059977049776E-4 0.0 0.0 13.606028269719694 0.0 21 1.641059977049776E-4 0.0 0.0 14.295109354082896 0.0 22 1.641059977049776E-4 0.0 0.0 15.053607275475303 0.0 23 1.641059977049776E-4 0.0 0.0 15.725621336077186 0.0 24 1.641059977049776E-4 0.0 0.0 16.294412724122637 0.0 25 1.641059977049776E-4 0.0 0.0 16.800433568045936 0.0 26 1.641059977049776E-4 0.0 0.0 17.281264141321522 0.0 27 1.641059977049776E-4 0.0 0.0 17.865440466651815 0.0 28 1.641059977049776E-4 0.0 0.0 18.364979123665766 0.0 29 1.641059977049776E-4 0.0 0.0 18.946940018027043 0.0 30 1.641059977049776E-4 0.0 0.0 19.612430865220155 0.0 31 1.641059977049776E-4 0.0 0.0 20.132154559951818 0.0 32 2.0513249713122203E-4 0.0 0.0 20.622544307593717 0.0 33 2.0513249713122203E-4 0.0 0.0 21.134678099931527 0.0 34 2.0513249713122203E-4 0.0 0.0 21.6736432228941 0.0 35 2.0513249713122203E-4 0.0 0.0 22.24354232642406 0.0 36 2.0513249713122203E-4 0.0 0.0 22.73951167798793 0.0 37 2.0513249713122203E-4 0.0 0.0 23.273717727017058 0.0 38 2.0513249713122203E-4 0.0 0.0 23.91373111806647 0.0 39 2.0513249713122203E-4 0.0 0.0 24.937260225752414 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCGTAA 35 1.2126839E-7 45.000004 36 ACGTTAC 20 7.034844E-4 45.0 30 ACCGCGT 55 1.8189894E-12 45.0 35 CATTACG 20 7.034844E-4 45.0 26 CGTTACA 20 7.034844E-4 45.0 31 ACTCGAT 25 3.8920974E-5 45.0 29 CGCGTAC 20 7.034844E-4 45.0 28 TAATCCG 30 2.1665073E-6 44.999996 1 TATAGCG 160 0.0 43.59375 1 CGTAAGG 415 0.0 43.373493 2 TAGCACG 80 0.0 42.1875 1 GCGTAAG 225 0.0 42.0 1 TCGATAG 60 3.6379788E-12 41.249996 1 CGCGTAA 60 3.6379788E-12 41.249996 31 TCGACTA 55 6.184564E-11 40.909092 1 CGAATAT 170 0.0 39.705883 14 ATTTTCG 40 3.4603545E-7 39.375 37 TCTATCG 40 3.4603545E-7 39.375 43 CCTTACG 35 6.25117E-6 38.57143 15 CGCATAC 35 6.25117E-6 38.57143 13 >>END_MODULE