##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935041.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1581850 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.30237000979865 33.0 31.0 34.0 30.0 34.0 2 32.47019881783987 34.0 31.0 34.0 31.0 34.0 3 32.48498466984859 34.0 31.0 34.0 30.0 34.0 4 36.006344470082496 37.0 35.0 37.0 35.0 37.0 5 35.92663337231723 37.0 35.0 37.0 35.0 37.0 6 35.85528147422322 37.0 35.0 37.0 35.0 37.0 7 36.084057906881185 37.0 35.0 37.0 35.0 37.0 8 35.66022758162911 37.0 35.0 37.0 35.0 37.0 9 37.495251130006004 39.0 37.0 39.0 35.0 39.0 10 37.38595758131302 39.0 37.0 39.0 34.0 39.0 11 37.33638145209723 39.0 37.0 39.0 34.0 39.0 12 37.16926573316054 39.0 37.0 39.0 34.0 39.0 13 37.061407845244496 39.0 37.0 39.0 33.0 39.0 14 38.23377184941682 40.0 37.0 41.0 33.0 41.0 15 38.26096279672535 40.0 37.0 41.0 34.0 41.0 16 38.383420046148494 40.0 37.0 41.0 34.0 41.0 17 38.329887157442236 40.0 37.0 41.0 34.0 41.0 18 38.3408730284161 40.0 37.0 41.0 34.0 41.0 19 38.323460505104784 40.0 37.0 41.0 34.0 41.0 20 38.202005879192086 40.0 37.0 41.0 34.0 41.0 21 38.20467490596454 40.0 37.0 41.0 34.0 41.0 22 38.12907165660461 40.0 37.0 41.0 34.0 41.0 23 37.88606947561399 40.0 36.0 41.0 33.0 41.0 24 37.64436893510763 40.0 36.0 41.0 33.0 41.0 25 37.61400575275785 39.0 36.0 41.0 33.0 41.0 26 37.76698802035591 40.0 36.0 41.0 33.0 41.0 27 37.74194266207289 40.0 36.0 41.0 33.0 41.0 28 37.70111009261308 40.0 36.0 41.0 33.0 41.0 29 37.743423207004454 40.0 36.0 41.0 33.0 41.0 30 37.63313841388248 40.0 36.0 41.0 33.0 41.0 31 37.615438884850015 40.0 36.0 41.0 33.0 41.0 32 37.4169655782786 40.0 35.0 41.0 33.0 41.0 33 37.32639694029143 39.0 35.0 41.0 33.0 41.0 34 37.25276100768088 39.0 35.0 41.0 33.0 41.0 35 37.16684894269368 39.0 35.0 41.0 32.0 41.0 36 37.1020204191295 39.0 35.0 41.0 32.0 41.0 37 37.03331858267219 39.0 35.0 41.0 32.0 41.0 38 36.95540411543446 39.0 35.0 41.0 32.0 41.0 39 36.89733034105636 39.0 35.0 41.0 32.0 41.0 40 36.854914182760695 39.0 35.0 41.0 31.0 41.0 41 36.77367386288207 39.0 35.0 41.0 31.0 41.0 42 36.82173278123716 39.0 35.0 41.0 32.0 41.0 43 36.731329772102285 39.0 35.0 41.0 31.0 41.0 44 36.67220216834719 39.0 35.0 41.0 31.0 41.0 45 36.698859563169705 39.0 35.0 41.0 31.0 41.0 46 36.59252836868224 39.0 35.0 41.0 31.0 41.0 47 36.494257989063435 39.0 35.0 41.0 31.0 41.0 48 36.44416031861428 39.0 35.0 40.0 31.0 41.0 49 36.411551032019474 39.0 35.0 40.0 31.0 41.0 50 36.32719663684926 38.0 35.0 40.0 31.0 41.0 51 35.41319025192022 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 12.0 9 17.0 10 23.0 11 29.0 12 20.0 13 27.0 14 39.0 15 56.0 16 90.0 17 182.0 18 323.0 19 704.0 20 1301.0 21 2414.0 22 3987.0 23 5578.0 24 7227.0 25 8458.0 26 9995.0 27 11470.0 28 13714.0 29 16615.0 30 20938.0 31 27449.0 32 36623.0 33 51089.0 34 96490.0 35 136887.0 36 114422.0 37 180512.0 38 324083.0 39 510638.0 40 436.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.05939248348453 20.562632360843317 24.17315168947751 10.204823466194647 2 29.535290956791098 29.630622372538483 23.688782122198692 17.145304548471728 3 30.71795682270759 28.48664538356987 25.359168062711383 15.436229731011158 4 27.801182160128963 24.573252836868225 29.1580111894301 18.467553813572714 5 28.92733192148434 29.102569775895315 22.361475487562032 19.608622815058318 6 24.861459683282234 37.82261276353637 22.74292758478996 14.57299996839144 7 76.98530201978696 6.380250971963207 12.074469766412745 4.55997724183709 8 76.42665233745298 8.835793532888706 8.506179473401398 6.231374656256914 9 71.22223978253311 7.594651831716029 9.82469892846983 11.358409457281033 10 41.65963903024939 26.04836109618485 17.06223725384834 15.229762619717418 11 33.51164775421184 24.16291051616778 22.308499541675886 20.016942187944494 12 28.26563833486108 21.768814995100673 28.595315611467587 21.37023105857066 13 24.871511205234377 24.45124379682018 31.590605936087492 19.08663906185795 14 20.248506495558996 30.229351708442646 27.786768656952304 21.735373139046054 15 18.354268735973704 25.71084489679805 35.33723172235042 20.59765464487783 16 20.83250624269052 25.182539431678098 29.969276480070807 24.015677845560578 17 21.124885418971456 25.79998103486424 27.845370926446883 25.229762619717423 18 20.737490912539116 26.56737364478301 29.293359041628474 23.401776401049403 19 23.414040522173405 26.52546069475614 26.354142301735312 23.706356481335146 20 24.899073869203782 27.539147201062047 28.25716724088883 19.304611688845338 21 23.729746815437622 29.061415431298798 27.433195309289754 19.77564244397383 22 20.818914562063405 24.971836773398238 28.040901476119735 26.168347188418622 23 21.399121282043176 29.081708126560674 26.96886556879603 22.55030502260012 24 22.605872870373297 24.93447545595347 27.954546891298165 24.505104782375067 25 20.805006795840313 29.359357714068967 26.049056484496003 23.786579005594717 26 19.98710370768404 28.33574612004931 26.675791004203937 25.00135916806271 27 22.87821221986914 29.043461769447166 25.37193792078895 22.706388089894745 28 19.510193760470333 26.73850238644625 29.335019123178558 24.41628472990486 29 21.182855517274078 25.634605051047828 27.65748964819673 25.525049783481368 30 22.036602712014414 30.539684546575213 25.622340929923826 21.80137181148655 31 25.71729304295603 26.88851661029807 22.046338148370577 25.34785219837532 32 24.43619812245156 28.655751177418843 25.13879318519455 21.769257514935045 33 22.82296045769194 28.96229098839966 24.03818313999431 24.17656541391409 34 22.572620665676265 25.393811044030723 25.581945190757654 26.451623099535354 35 22.253121345260297 26.194582292884917 26.208742927584787 25.34355343427 36 23.375414862344723 27.392736353004395 25.620634067705534 23.61121471694535 37 22.605430350538928 27.84145146505674 28.03299933622025 21.52011884818409 38 23.706799001169518 28.002402250529446 24.53791446723773 23.75288428106331 39 22.320700445680693 25.188861143597684 28.3681132850776 24.122325125644025 40 22.949457913202895 25.481809273951384 27.6319499320416 23.936782880804124 41 20.7070834782059 26.265575117741886 25.822992066251544 27.204349337800675 42 23.324588298511237 24.41963523722224 28.42993962765117 23.825836836615355 43 23.355817555394 24.156525587128993 28.590827196004675 23.896829661472328 44 22.22378860195341 24.99971552296362 27.594778265954425 25.18171760912855 45 22.532098492271707 23.47099914656889 26.058033315421813 27.938869045737587 46 24.428169548313683 26.427600594240918 25.87799095995196 23.26623889749344 47 20.377848721433764 24.91456206340677 31.34475455953472 23.36283465562474 48 21.55077915099409 24.386130164048424 27.953029680437464 26.110061004520023 49 21.511268451496665 22.719663684925877 32.59468344027563 23.17438442330183 50 21.119006226886242 23.663684925877927 29.46265448683503 25.754654360400796 51 20.63330910010431 23.02974365458166 26.641400891361382 29.69554635395265 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 843.0 1 1591.0 2 2339.0 3 2819.0 4 3299.0 5 2598.0 6 1897.0 7 1914.0 8 1931.0 9 2083.0 10 2235.0 11 2255.0 12 2275.0 13 2569.5 14 2864.0 15 2758.5 16 2653.0 17 2954.5 18 3256.0 19 3723.5 20 4191.0 21 4371.5 22 4552.0 23 5023.5 24 5495.0 25 8042.0 26 11185.5 27 11782.0 28 16282.0 29 20782.0 30 23765.5 31 26749.0 32 26623.5 33 26498.0 34 30853.0 35 35208.0 36 36725.0 37 38242.0 38 43132.5 39 48023.0 40 55263.5 41 62504.0 42 69263.0 43 76022.0 44 90112.0 45 104202.0 46 148373.5 47 192545.0 48 182119.0 49 171693.0 50 168439.5 51 165186.0 52 140715.0 53 116244.0 54 102619.5 55 88995.0 56 81466.5 57 73938.0 58 71000.0 59 68062.0 60 64197.5 61 60333.0 62 53026.0 63 45719.0 64 40687.5 65 35656.0 66 29423.0 67 23190.0 68 18933.5 69 14677.0 70 13069.5 71 11462.0 72 8796.0 73 6130.0 74 5226.0 75 3356.5 76 2391.0 77 1783.0 78 1175.0 79 974.0 80 773.0 81 640.5 82 508.0 83 383.0 84 258.0 85 186.5 86 115.0 87 75.0 88 35.0 89 21.0 90 7.0 91 5.0 92 3.0 93 2.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1581850.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.302920027813418 #Duplication Level Percentage of deduplicated Percentage of total 1 67.55108663607945 13.039332231281373 2 12.630427243255845 4.876082539873669 3 5.545627976689631 3.2114044001413404 4 3.1250645101060766 2.4129148128134204 5 1.8732273367361914 1.8079378737466307 6 1.3011705888004046 1.5069835090894261 7 0.9137511581630654 1.234664587194048 8 0.6838604497799872 1.0560402857830085 9 0.514903249401251 0.8945222620728255 >10 3.3970469012824696 13.878697885103964 >50 1.3484927299223677 19.19563201584846 >100 1.0980953846870696 29.25621886418881 >500 0.00895456822300798 1.184017802902408 >1k 0.006964664173450651 2.7451672022848426 >5k 3.316506749262215E-4 0.5716190841911652 >10k+ 9.949520247786645E-4 3.1287646434846925 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGC 17873 1.129879571387932 No Hit GAATCTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGCCGTCTTC 16172 1.022347251635743 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGCCG 14828 0.9373834434364826 No Hit GCTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGCCGTCTTCTGC 8929 0.5644656572999969 No Hit CCTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGCCGTCTTCTGC 4522 0.2858678130037614 No Hit CTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGCCGTCTTCTGCT 3680 0.23263899864083196 Illumina Single End Adapter 2 (95% over 21bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCAGTACGTT 3528 0.22302999652305844 No Hit GAATGACTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGCCGTCT 3390 0.21430603407402724 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGCCGTC 2590 0.16373233871732465 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCAGTACGTTCGTA 2537 0.1603818313999431 No Hit GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA 2492 0.15753706103612858 No Hit GAACTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGCCGTCTTCT 2333 0.14748553908398393 No Hit TCTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGCCGTCTTCTGC 2317 0.14647406517684988 No Hit GAATGATCCGGCTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGC 1745 0.11031387299680753 No Hit ACTGTCTCTTATACACATCTGACGCCAGTACGTTCGTATGCCGTCTTCTGC 1697 0.10727945127540538 No Hit TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 1589 0.10045200240225052 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.8965135758763473E-4 0.0 0.0 0.24566172519518287 0.0 2 1.8965135758763473E-4 0.0 0.0 1.4061383822739197 0.0 3 1.8965135758763473E-4 0.0 0.0 1.8891803900496253 0.0 4 1.8965135758763473E-4 0.0 0.0 2.6446881815595664 0.0 5 1.8965135758763473E-4 0.0 0.0 5.328823845497361 0.0 6 1.8965135758763473E-4 0.0 0.0 6.213737080001264 0.0 7 1.8965135758763473E-4 0.0 0.0 7.304864557322123 0.0 8 1.8965135758763473E-4 0.0 0.0 8.751588330119796 0.0 9 1.8965135758763473E-4 0.0 0.0 9.20061952776812 0.0 10 1.8965135758763473E-4 0.0 0.0 11.286847678351297 0.0 11 2.5286847678351296E-4 0.0 0.0 12.922274551948668 0.0 12 2.5286847678351296E-4 0.0 0.0 15.491165407592376 0.0 13 2.5286847678351296E-4 0.0 0.0 16.059108006448145 0.0 14 2.5286847678351296E-4 0.0 0.0 16.301924961279514 0.0 15 2.5286847678351296E-4 0.0 0.0 16.87195372506875 0.0 16 2.5286847678351296E-4 0.0 0.0 17.67626513259791 0.0 17 2.5286847678351296E-4 0.0 0.0 18.614091095868762 0.0 18 2.5286847678351296E-4 0.0 0.0 19.59737016784145 0.0 19 2.5286847678351296E-4 0.0 0.0 20.507696684262097 0.0 20 2.5286847678351296E-4 0.0 0.0 21.140752915889625 0.0 21 2.5286847678351296E-4 0.0 0.0 21.84752030849954 0.0 22 2.5286847678351296E-4 0.0 0.0 22.636027436229732 0.0 23 2.5286847678351296E-4 0.0 0.0 23.31181844043367 0.0 24 2.5286847678351296E-4 0.0 0.0 23.911559250244967 0.0 25 2.5286847678351296E-4 0.0 0.0 24.442772702847932 0.0 26 2.5286847678351296E-4 0.0 0.0 24.921389512279926 0.0 27 2.5286847678351296E-4 0.0 0.0 25.422638050384045 0.0 28 3.1608559597939124E-4 0.0 0.0 25.897335398425895 0.0 29 3.1608559597939124E-4 0.0 0.0 26.386888769478777 0.0 30 3.1608559597939124E-4 0.0 0.0 26.91930334734646 0.0 31 3.1608559597939124E-4 0.0 0.0 27.420867971046558 0.0 32 3.1608559597939124E-4 0.0 0.0 27.921610772197113 0.0 33 3.1608559597939124E-4 0.0 0.0 28.398710370768406 0.0 34 3.1608559597939124E-4 0.0 0.0 28.883396023643204 0.0 35 3.1608559597939124E-4 0.0 0.0 29.383506653601795 0.0 36 3.1608559597939124E-4 0.0 0.0 29.862249897272182 0.0 37 3.1608559597939124E-4 0.0 0.0 30.32468312419003 0.0 38 3.7930271517526946E-4 0.0 0.0 30.79065650978285 0.0 39 4.425198343711477E-4 0.0 0.0 31.26592281189746 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACG 20 7.034092E-4 45.000004 28 GTCGATC 20 7.034092E-4 45.000004 23 CACGGTA 20 7.034092E-4 45.000004 36 CGGTTAC 20 7.034092E-4 45.000004 45 GCTATCG 20 7.034092E-4 45.000004 14 CGACATA 20 7.034092E-4 45.000004 11 CGTACTT 20 7.034092E-4 45.000004 39 CGTACCC 20 7.034092E-4 45.000004 28 TACTACG 20 7.034092E-4 45.000004 17 CGTATTA 45 3.8562575E-10 45.0 18 CCGGATA 25 3.8914743E-5 45.0 27 CGTAGTA 25 3.8914743E-5 45.0 34 TCGTCGG 25 3.8914743E-5 45.0 1 CGTACTA 25 3.8914743E-5 45.0 42 CTCGAAT 45 3.8562575E-10 45.0 43 TTACGCG 35 1.21232E-7 45.0 1 CGGTCTA 35 1.21232E-7 45.0 31 TCGACGA 25 3.8914743E-5 45.0 39 TGTAACG 35 1.21232E-7 45.0 1 TCGAACG 25 3.8914743E-5 45.0 1 >>END_MODULE