##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935038.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 493575 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.050490806868254 33.0 31.0 34.0 30.0 34.0 2 32.244696348072736 34.0 31.0 34.0 30.0 34.0 3 32.247901534721166 34.0 31.0 34.0 30.0 34.0 4 35.832874436509144 37.0 35.0 37.0 35.0 37.0 5 35.717433014232896 37.0 35.0 37.0 35.0 37.0 6 35.6505434837664 37.0 35.0 37.0 33.0 37.0 7 35.93301524590994 37.0 35.0 37.0 35.0 37.0 8 35.5668642050347 37.0 35.0 37.0 35.0 37.0 9 37.25916831281973 39.0 37.0 39.0 34.0 39.0 10 37.23962923567847 39.0 37.0 39.0 34.0 39.0 11 37.162082763511116 39.0 37.0 39.0 34.0 39.0 12 36.83860001013017 39.0 35.0 39.0 33.0 39.0 13 36.577496834321025 39.0 35.0 39.0 33.0 39.0 14 37.574386871296156 39.0 36.0 41.0 33.0 41.0 15 37.70537608266221 39.0 36.0 41.0 33.0 41.0 16 37.851813807425415 40.0 36.0 41.0 33.0 41.0 17 37.859909841462795 39.0 36.0 41.0 34.0 41.0 18 37.855845616167755 39.0 36.0 41.0 34.0 41.0 19 37.761065694170085 39.0 36.0 41.0 34.0 41.0 20 37.672355771665906 39.0 35.0 41.0 33.0 41.0 21 37.60028567087069 39.0 35.0 41.0 33.0 41.0 22 37.48147900521704 39.0 35.0 41.0 33.0 41.0 23 37.23727700957301 39.0 35.0 41.0 33.0 41.0 24 36.971765182596364 39.0 35.0 41.0 32.0 41.0 25 36.964315453578486 39.0 35.0 40.0 32.0 41.0 26 37.18081142683483 39.0 35.0 41.0 33.0 41.0 27 37.23327153927975 39.0 35.0 41.0 33.0 41.0 28 37.19999392189637 39.0 35.0 41.0 33.0 41.0 29 37.294751557514054 39.0 35.0 41.0 33.0 41.0 30 37.20177683229499 39.0 35.0 41.0 33.0 41.0 31 37.03015144608216 39.0 35.0 41.0 33.0 41.0 32 36.88424049030036 39.0 35.0 41.0 32.0 41.0 33 36.81212784277972 39.0 35.0 41.0 32.0 41.0 34 36.71986425568556 39.0 35.0 41.0 32.0 41.0 35 36.591399483361194 39.0 35.0 41.0 31.0 41.0 36 36.535160816491924 39.0 35.0 41.0 31.0 41.0 37 36.4359236184977 39.0 35.0 41.0 31.0 41.0 38 36.27815225649597 39.0 35.0 40.0 31.0 41.0 39 36.31255027098212 39.0 35.0 40.0 31.0 41.0 40 36.18930658967735 39.0 35.0 40.0 30.0 41.0 41 36.11329787772882 38.0 35.0 40.0 30.0 41.0 42 36.11157372233197 38.0 35.0 40.0 30.0 41.0 43 36.042540647318035 38.0 35.0 40.0 30.0 41.0 44 35.911146229043204 38.0 35.0 40.0 30.0 41.0 45 35.931797599149064 38.0 35.0 40.0 30.0 41.0 46 35.791660841817354 38.0 35.0 40.0 30.0 41.0 47 35.70180823583042 38.0 35.0 40.0 30.0 41.0 48 35.68036063414881 38.0 35.0 40.0 30.0 41.0 49 35.687178240388995 38.0 35.0 40.0 30.0 41.0 50 35.61768728156815 38.0 35.0 40.0 30.0 41.0 51 34.63134680646305 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 6.0 10 4.0 11 8.0 12 4.0 13 11.0 14 14.0 15 31.0 16 51.0 17 120.0 18 200.0 19 390.0 20 638.0 21 1017.0 22 1719.0 23 2563.0 24 3294.0 25 3824.0 26 4350.0 27 4617.0 28 5161.0 29 6146.0 30 7599.0 31 9919.0 32 13024.0 33 18623.0 34 37111.0 35 56978.0 36 35036.0 37 54095.0 38 98413.0 39 128530.0 40 78.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.55670364179709 25.232842019956443 26.1222711847237 13.088183153522767 2 28.823988248999644 30.001722129362307 23.153725371017575 18.020564250620474 3 27.549207313984702 28.186395178037788 27.193030441169018 17.071367066808488 4 28.216785696196123 26.367826571443043 27.347414273413364 18.067973458947474 5 24.89104999240237 30.63647875196272 24.29762447449729 20.174846781137617 6 24.30370257812896 33.22392746796333 26.60831687180266 15.86405308210505 7 72.9015853720306 8.307552043762346 12.515625791419744 6.275236792787317 8 69.99301018082357 8.35111178645596 12.289520336321734 9.366357696398724 9 63.95603505039761 9.881983487818466 14.408144658866433 11.75383680291749 10 40.857417818973815 22.76837360076989 20.500835739249354 15.873372841006939 11 32.65015448513397 21.65587803272046 23.903358152256494 21.790609329889072 12 27.099022438332575 20.149723952793394 32.48017018690169 20.271083421972342 13 20.956288304715596 29.349136402775667 32.95385706326293 16.740718229245807 14 15.568657245606039 34.98110722787823 29.520336321734288 19.929899204781442 15 12.07334245048878 24.01316922453528 43.24125006331358 20.67223826166236 16 13.91845210960847 26.179202755406976 34.78944436002634 25.112900774958213 17 14.690979081193333 25.967279542116195 27.897887858987996 31.443853517702475 18 17.88016005672897 26.624525148153776 31.321886238160364 24.173428556956896 19 18.649445373043612 27.443853517702475 28.85741781897381 25.0492832902801 20 21.078660791166488 28.245960593628123 28.5729625690118 22.10241604619359 21 18.051562579141976 30.897026794306843 29.62974218710429 21.421668439446893 22 16.220229954920732 28.359823734994684 27.28339158182647 28.13655472825812 23 16.740718229245807 29.430380387985615 27.72243326748721 26.106468115281366 24 20.939674821455707 24.405206908777792 29.60644278984957 25.04867547991693 25 15.511928278377146 28.963379425619205 26.887301828496174 28.637390467507473 26 15.85675935774705 30.149420047611812 27.571696297421873 26.42212429721927 27 19.359975687585475 28.677100744567696 28.796839386111532 23.1660841817353 28 16.360634148812238 26.677404649749274 30.713265461176114 26.248695740262374 29 16.867547991693257 23.106316162690575 29.368586334397 30.657549511219166 30 20.054702932685004 25.990781542825303 29.390062300562224 24.56445322392747 31 24.13756774553006 26.28455655168921 22.29651015549815 27.281365547282583 32 20.59768019044725 28.184774350402677 22.573469077647772 28.644076381502302 33 21.049688497188875 24.476118117813908 28.507724256698573 25.966469128298638 34 18.65349744213139 23.260092184571747 27.04067264346857 31.045737729828293 35 16.52393253304969 24.911512941295648 28.209897178746896 30.354657346907764 36 20.926302993466038 22.223775515372537 33.325634402066555 23.52428708909487 37 20.884566681861926 23.249556804943524 31.65618193790204 24.20969457529251 38 19.7007546978676 26.837258775262118 26.59271640581472 26.869270121055568 39 19.872967634098163 22.139492478346757 31.388137567745527 26.59940231980955 40 20.182140505495617 23.273261409107025 30.378564554525656 26.1660335308717 41 16.864711543331815 25.58638504786507 27.13468064630502 30.4142227624981 42 20.857823025882592 21.93871245504736 30.904117915210456 26.299346603859597 43 24.001418224180725 20.111026693005115 31.413260396089754 24.47429468672441 44 20.394468925695183 21.558020564250622 29.519728511371117 28.52778199868308 45 19.947930912222052 21.303145418629388 26.83118067163045 31.917742997518104 46 24.07050600212734 21.36899154130578 29.80458896824191 24.75591348832498 47 17.305374056627663 22.107886339462087 34.32487463911259 26.26186496479765 48 18.6842931671985 20.160259332421617 32.07536848503267 29.08007901534721 49 19.40353543027909 17.42025021526617 37.088993567340324 26.08722078711442 50 19.06822671326546 18.265309223522262 34.01671478498709 28.649749278225194 51 17.075824342805046 20.350503976092792 28.084688243934558 34.488983437167605 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1972.0 1 1793.0 2 1614.0 3 1713.5 4 1813.0 5 1520.0 6 1227.0 7 1280.5 8 1334.0 9 1467.5 10 1601.0 11 1801.0 12 2001.0 13 1934.0 14 1867.0 15 1936.5 16 2006.0 17 1948.5 18 1891.0 19 2035.0 20 2179.0 21 2060.5 22 1942.0 23 1950.5 24 1959.0 25 1773.0 26 1828.5 27 2070.0 28 2774.0 29 3478.0 30 3960.5 31 4443.0 32 4271.0 33 4099.0 34 5398.5 35 6698.0 36 7791.0 37 8884.0 38 10015.0 39 11146.0 40 14203.5 41 17261.0 42 23318.0 43 29375.0 44 33804.0 45 38233.0 46 51415.5 47 64598.0 48 68662.0 49 72726.0 50 70887.5 51 69049.0 52 55070.5 53 41092.0 54 34167.0 55 27242.0 56 22175.0 57 17108.0 58 15789.0 59 14470.0 60 13039.5 61 11609.0 62 10265.5 63 8922.0 64 7374.0 65 5826.0 66 4998.5 67 4171.0 68 3295.0 69 2419.0 70 1875.0 71 1331.0 72 1118.0 73 905.0 74 798.5 75 486.5 76 281.0 77 236.0 78 191.0 79 170.5 80 150.0 81 119.0 82 88.0 83 53.0 84 18.0 85 10.5 86 3.0 87 3.0 88 3.0 89 2.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 493575.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.438814916167463 #Duplication Level Percentage of deduplicated Percentage of total 1 68.36520327147525 18.07494956000701 2 12.165945616178805 6.433063688526208 3 5.702532306605693 4.523045886234405 4 3.1879525412302634 3.3714274879645068 5 2.0103380732132523 2.6575478118304954 6 1.337812311182619 2.12221032527565 7 1.0092039116266638 1.8677508802518714 8 0.7052113881226334 1.4915962693878275 9 0.5559786948238373 1.322947602880181 >10 3.6210559548789836 20.627737826292346 >50 1.0342562761288747 19.150305903224123 >100 0.28528556018127327 11.2876918525708 >500 0.010765492837029178 2.0873315006996345 >1k 0.007689637740735128 3.8861733355287336 >5k 7.689637740735129E-4 1.0962200693262325 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCTTCTGC 5392 1.0924378260649343 No Hit GCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCTTCTGC 2853 0.5780276553715241 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGC 2551 0.516841412146077 No Hit GAATCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCTTC 2354 0.47692853163146437 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCG 2309 0.46781137618396396 No Hit CTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCTTCTGCT 2253 0.45646558273818566 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1686 0.3415894240996809 No Hit TCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCTTCTGC 1439 0.2915463708656233 No Hit ACTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCTTCTGC 1252 0.25365952489489946 No Hit CGCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCTTCTG 1228 0.24879704198956595 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCC 1190 0.2410981107227878 No Hit AAAACTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCTTC 974 0.197335764574786 No Hit ACCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCTTCTG 951 0.19267588512384135 No Hit CGTTCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCTTC 900 0.18234310895000758 No Hit AGCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCTTCTG 868 0.17585979840956287 No Hit AGACATAGACCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCC 808 0.16370359114622904 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 791 0.16025933242161777 No Hit ACAGAAATAATAAATGGACCAAATCTCACGCTCAGTGTCTCCATCTGCTGC 747 0.1513447804285063 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTGCTCATT 680 0.13777034898445017 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 631 0.1278427797193942 No Hit GCCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCTTCTG 623 0.12622195208428305 No Hit GAATGACTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCT 579 0.11730740009117155 No Hit GAGCCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCTTC 578 0.11710479663678267 No Hit GGCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCTTCTG 575 0.11649698627361597 No Hit CGTCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCTTCT 562 0.11386314136656031 No Hit AAAAACTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCTT 494 0.10008610646811528 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.052069087777947E-4 0.0 0.0 0.48381704908068685 0.0 2 4.052069087777947E-4 0.0 0.0 2.80382920528795 0.0 3 4.052069087777947E-4 0.0 0.0 4.094210606290837 0.0 4 4.052069087777947E-4 0.0 0.0 5.641290584004457 0.0 5 4.052069087777947E-4 0.0 0.0 9.819986830775465 0.0 6 4.052069087777947E-4 0.0 0.0 11.813604821962214 0.0 7 4.052069087777947E-4 0.0 0.0 14.004963784632528 0.0 8 4.052069087777947E-4 0.0 0.0 17.00329230613382 0.0 9 4.052069087777947E-4 0.0 0.0 18.062705769133363 0.0 10 4.052069087777947E-4 0.0 0.0 20.59707238008408 0.0 11 4.052069087777947E-4 0.0 0.0 24.194296712758952 0.0 12 4.052069087777947E-4 0.0 0.0 27.372942308666364 0.0 13 4.052069087777947E-4 0.0 0.0 28.365091424808792 0.0 14 4.052069087777947E-4 0.0 0.0 28.709719900724306 0.0 15 4.052069087777947E-4 0.0 0.0 29.482044268854786 0.0 16 4.052069087777947E-4 0.0 0.0 30.94139695081801 0.0 17 4.052069087777947E-4 0.0 0.0 32.645089398774246 0.0 18 4.052069087777947E-4 0.0 0.0 34.786810515119285 0.0 19 4.052069087777947E-4 0.0 0.0 36.030187914703944 0.0 20 4.052069087777947E-4 0.0 0.0 37.06528896317682 0.0 21 6.07810363166692E-4 0.0 0.0 38.23127184318493 0.0 22 6.07810363166692E-4 0.0 0.0 39.32593830724814 0.0 23 6.07810363166692E-4 0.0 0.0 40.27067821506357 0.0 24 6.07810363166692E-4 0.0 0.0 41.0018740819531 0.0 25 6.07810363166692E-4 0.0 0.0 41.684445119789295 0.0 26 6.07810363166692E-4 0.0 0.0 42.335410018740816 0.0 27 6.07810363166692E-4 0.0 0.0 42.92377045028618 0.0 28 6.07810363166692E-4 0.0 0.0 43.486805450032925 0.0 29 6.07810363166692E-4 0.0 0.0 44.06868257103783 0.0 30 6.07810363166692E-4 0.0 0.0 44.76320721268298 0.0 31 6.07810363166692E-4 0.0 0.0 45.42531530162589 0.0 32 6.07810363166692E-4 0.0 0.0 46.047510510054195 0.0 33 6.07810363166692E-4 0.0 0.0 46.58339664691283 0.0 34 8.104138175555894E-4 0.0 0.0 47.17661956136352 0.0 35 8.104138175555894E-4 0.0 0.0 47.8192777186851 0.0 36 8.104138175555894E-4 0.0 0.0 48.33996859646457 0.0 37 8.104138175555894E-4 0.0 0.0 48.849921491161425 0.0 38 8.104138175555894E-4 0.0 0.0 49.362103023856555 0.0 39 8.104138175555894E-4 0.0 0.0 49.87813402218508 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCCTAG 35 1.2100463E-7 45.000004 14 CCTTAGG 35 1.2100463E-7 45.000004 2 ATGATCG 70 0.0 45.000004 27 GATCGTG 85 0.0 45.000004 29 GTCGAGG 35 1.2100463E-7 45.000004 2 TTGTCGC 70 0.0 45.000004 38 TCCCTAT 35 1.2100463E-7 45.000004 23 TAAACGT 35 1.2100463E-7 45.000004 33 AAGCGCC 35 1.2100463E-7 45.000004 34 TTATCGG 35 1.2100463E-7 45.000004 13 ATCCGGC 35 1.2100463E-7 45.000004 6 GCCGATA 35 1.2100463E-7 45.000004 9 GTTGTCG 70 0.0 45.000004 37 GCCCTCA 70 0.0 45.000004 8 ACGTGAT 35 1.2100463E-7 45.000004 36 CATACAT 70 0.0 45.000004 33 TGCTCGA 35 1.2100463E-7 45.000004 17 CCAAGCG 140 0.0 45.000004 20 GCGGCTA 135 0.0 45.000004 24 CGACTTG 35 1.2100463E-7 45.000004 21 >>END_MODULE