##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935036.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1712852 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.23579270129585 33.0 31.0 34.0 30.0 34.0 2 32.410125918643296 34.0 31.0 34.0 30.0 34.0 3 32.41104251855969 34.0 31.0 34.0 30.0 34.0 4 35.958543411806744 37.0 35.0 37.0 35.0 37.0 5 35.872301284641054 37.0 35.0 37.0 35.0 37.0 6 35.81023579386894 37.0 35.0 37.0 35.0 37.0 7 36.12947995506909 37.0 35.0 37.0 35.0 37.0 8 35.910520582046786 37.0 35.0 37.0 35.0 37.0 9 37.64463421241298 39.0 38.0 39.0 35.0 39.0 10 37.434010644235464 39.0 37.0 39.0 35.0 39.0 11 37.3480446646879 39.0 37.0 39.0 34.0 39.0 12 37.217170543631326 39.0 37.0 39.0 34.0 39.0 13 37.137082479980755 39.0 37.0 39.0 33.0 39.0 14 38.20594423803107 40.0 38.0 41.0 33.0 41.0 15 38.303244530175405 40.0 38.0 41.0 34.0 41.0 16 38.370564415372726 40.0 37.0 41.0 34.0 41.0 17 38.41604411823088 40.0 37.0 41.0 34.0 41.0 18 38.413343943317926 40.0 37.0 41.0 34.0 41.0 19 38.39677567005205 40.0 37.0 41.0 34.0 41.0 20 38.35938072874948 40.0 37.0 41.0 34.0 41.0 21 38.31077758031634 40.0 37.0 41.0 34.0 41.0 22 38.23561405188539 40.0 37.0 41.0 34.0 41.0 23 37.99875529234283 40.0 36.0 41.0 34.0 41.0 24 37.795326741598224 40.0 36.0 41.0 33.0 41.0 25 37.7598187117159 39.0 36.0 41.0 33.0 41.0 26 37.93006284255733 40.0 36.0 41.0 34.0 41.0 27 38.00155413310665 40.0 37.0 41.0 34.0 41.0 28 37.996064458575525 40.0 37.0 41.0 34.0 41.0 29 38.03305130857774 40.0 37.0 41.0 34.0 41.0 30 37.96571682784035 40.0 36.0 41.0 34.0 41.0 31 37.8651185274618 40.0 36.0 41.0 34.0 41.0 32 37.7962182371857 40.0 36.0 41.0 34.0 41.0 33 37.7320305548874 40.0 36.0 41.0 33.0 41.0 34 37.56435173616868 40.0 36.0 41.0 33.0 41.0 35 37.51371630473619 40.0 36.0 41.0 33.0 41.0 36 37.44656164105247 40.0 36.0 41.0 33.0 41.0 37 37.295262521221915 39.0 35.0 41.0 33.0 41.0 38 37.22779901591031 39.0 35.0 41.0 33.0 41.0 39 37.15312998437693 39.0 35.0 41.0 32.0 41.0 40 37.05040365425618 39.0 35.0 41.0 32.0 41.0 41 37.039996450364654 39.0 35.0 41.0 32.0 41.0 42 37.032391590166576 39.0 35.0 41.0 32.0 41.0 43 36.92240018402057 39.0 35.0 41.0 32.0 41.0 44 36.79800064453905 39.0 35.0 41.0 31.0 41.0 45 36.83118973501505 39.0 35.0 41.0 32.0 41.0 46 36.763294785538974 39.0 35.0 41.0 31.0 41.0 47 36.710251089994934 39.0 35.0 41.0 31.0 41.0 48 36.635769465196056 39.0 35.0 40.0 31.0 41.0 49 36.568946412182726 39.0 35.0 40.0 31.0 41.0 50 36.46694810760066 39.0 35.0 40.0 31.0 41.0 51 35.38182283116113 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 23.0 10 24.0 11 25.0 12 20.0 13 20.0 14 29.0 15 39.0 16 87.0 17 150.0 18 273.0 19 555.0 20 947.0 21 1602.0 22 2479.0 23 3694.0 24 5244.0 25 7102.0 26 9089.0 27 10967.0 28 13138.0 29 16346.0 30 20985.0 31 27930.0 32 38082.0 33 55061.0 34 103520.0 35 136713.0 36 129070.0 37 208826.0 38 389008.0 39 531480.0 40 322.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.577822252010094 24.478005104936095 27.401900456081435 9.54227218697237 2 30.51232680932153 25.571211056179987 26.315933892712273 17.600528241786215 3 31.130477122366674 24.856963707313884 27.831126098460345 16.181433071859097 4 28.907809898344983 26.704175258574587 26.529670981497528 17.858343861582902 5 25.20713990467361 29.549663368463825 25.572028406423907 19.67116832043866 6 26.61858701160404 34.041119723128446 24.112240870781598 15.228052394485921 7 80.89694848124648 5.682627570858427 8.281509435724745 5.138914512170345 8 80.87161062368494 4.472190241772203 8.366455478932213 6.289743655610643 9 75.17135164042193 7.5878709894375 10.17892964482629 7.061847725314271 10 39.99919432618814 31.602730416871978 15.404016225569986 12.994059031369904 11 29.903984699203434 25.43856678802372 24.667747125846248 19.9897013869266 12 27.57628796883794 23.160611658216823 29.516502301424758 19.74659807152048 13 25.585514685448597 25.990862024272964 30.69033401601539 17.733289274263043 14 20.755675329800823 29.99243367202771 28.272378465856946 20.979512532314526 15 18.47941328264205 27.074318154750088 34.489086038957254 19.957182523650612 16 21.77269256187925 27.630583377898382 30.061499767639 20.535224292583365 17 22.23758970418927 26.272497565463915 26.54911224087078 24.940800489476032 18 22.80267063353985 26.69425029132698 29.187869121208372 21.3152099539248 19 23.68278169976157 27.698948887586315 26.21142982581099 22.40683958684113 20 24.359430937407318 29.30959592539227 26.592665332439697 19.738307804760716 21 23.810988923736552 27.607347278106925 28.672996849698627 19.908666948457892 22 22.013168680072766 26.59564282261398 25.785473584407757 25.60571491290549 23 20.706459168684745 28.202495020001727 27.20118258903863 23.889863222274897 24 23.05202084009593 26.30933670860063 27.385203158241346 23.253439293062097 25 20.92620961997884 29.10484968929014 25.72066938649691 24.24827130423411 26 20.685441590983928 28.929236151167757 27.61178432228821 22.773537935560107 27 21.93190071296294 27.938549273375635 28.459785200355896 21.669764813305527 28 19.62271112740622 26.964501311263323 29.221438863369396 24.19134869796106 29 20.438309906518484 24.872259833307258 30.885505577831594 23.803924682342668 30 23.078584723023354 25.57897588349723 28.78403971855128 22.558399674928133 31 24.197011767508226 27.944037196441958 25.34684841422376 22.512102621826056 32 24.292700128207223 27.454911457615722 26.945468727012024 21.30691968716503 33 24.525236272602655 26.12823524741192 25.20953357324509 24.136994906740338 34 22.450918117852563 27.105202317538236 27.487897378173948 22.955982186435257 35 22.928717717584473 25.044895881255357 28.845399369005616 23.180987032154558 36 26.40905343835895 25.389175480426797 27.079630931335576 21.122140149878682 37 24.317862839287923 26.902732985687027 28.955099448171822 19.824304726853224 38 24.738564686265946 26.31050435180623 25.899493943434692 23.051437018493136 39 24.572876115391175 24.798464782713275 26.45978753564231 24.168871566253245 40 24.482967588559898 25.139066305787072 28.097348749337364 22.280617356315666 41 24.061506773498238 26.37647619292268 25.609509753323696 23.952507280255386 42 26.07253866650475 23.921272824505564 28.156665024181894 21.849523484807793 43 25.865515526151704 22.976882999815512 29.183957516469604 21.973643957563173 44 23.054356126507138 24.258721710924235 27.395828711412314 25.291093451156314 45 22.94722486239325 23.040110879398803 27.080973721022016 26.931690537185933 46 24.466678965841766 23.995126257259823 28.026356042436824 23.511838734461588 47 21.73258401776686 24.687655442501747 30.702827798315326 22.87693274141607 48 23.014072435913903 23.282805519682963 29.449829874384942 24.25329217001819 49 24.74370231637059 21.287186516990374 30.76202730883929 23.20708385779974 50 21.677529640622776 22.56861655297714 29.515568186860275 26.23828561953981 51 21.947138456796033 22.239808226279912 26.26771022832095 29.545343088603104 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 834.0 1 1167.0 2 1500.0 3 2345.0 4 3190.0 5 2441.5 6 1693.0 7 1819.0 8 1945.0 9 2234.0 10 2523.0 11 2764.0 12 3005.0 13 3144.0 14 3283.0 15 3443.5 16 3604.0 17 3701.0 18 3798.0 19 3740.0 20 3682.0 21 3598.0 22 3514.0 23 3887.0 24 4260.0 25 4769.0 26 7406.0 27 9534.0 28 10996.5 29 12459.0 30 15089.5 31 17720.0 32 20037.0 33 22354.0 34 26845.5 35 31337.0 36 36684.5 37 42032.0 38 49351.5 39 56671.0 40 63589.5 41 70508.0 42 83933.5 43 97359.0 44 113685.0 45 130011.0 46 159991.5 47 189972.0 48 213892.5 49 237813.0 50 229868.0 51 221923.0 52 182067.5 53 142212.0 54 119334.0 55 96456.0 56 84755.0 57 73054.0 58 66746.5 59 60439.0 60 54496.0 61 48553.0 62 44154.5 63 39756.0 64 32925.0 65 26094.0 66 22083.0 67 18072.0 68 13537.5 69 9003.0 70 7785.5 71 6568.0 72 5685.5 73 4803.0 74 3864.5 75 2283.5 76 1641.0 77 1264.0 78 887.0 79 593.5 80 300.0 81 222.5 82 145.0 83 130.5 84 116.0 85 63.0 86 10.0 87 8.0 88 6.0 89 3.5 90 1.0 91 1.0 92 1.0 93 2.0 94 3.0 95 3.0 96 3.0 97 1.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1712852.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.833786623060018 #Duplication Level Percentage of deduplicated Percentage of total 1 65.31211517640679 16.219471321916064 2 13.89844413182384 6.903019919244676 3 6.205015755130505 4.622821117669098 4 3.3397451158068496 3.3175407032541666 5 2.114043229183578 2.6249849232734865 6 1.3837609980817018 2.0618415218204125 7 0.9849487417647179 1.7122004821345511 8 0.7314770251171205 1.4532275489143427 9 0.5451048273938147 1.218331527362816 >10 4.031234378598889 21.166311274663485 >50 0.953694273051178 17.048764284036917 >100 0.48662815567847084 17.015095050484405 >500 0.00903364300999335 1.5214354938165362 >1k 0.004041366609733868 1.7982587071379337 >5k 7.131823428942119E-4 1.316696124271088 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCTTCTGC 8720 0.5090924376420146 Illumina Single End Adapter 1 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCTTCTGC 7836 0.4574826079544526 Illumina Single End Adapter 1 (95% over 21bp) CTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCTTCTGCT 5747 0.3355222751294332 Illumina Single End Adapter 1 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCTTCTGC 3887 0.2269314570085448 Illumina Single End Adapter 1 (95% over 21bp) ACTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCTTCTGC 2828 0.16510474927197447 Illumina Single End Adapter 1 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCC 2570 0.1500421519197222 No Hit ACCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCTTCTG 2058 0.12015048585633785 No Hit CGCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCTTCTG 1955 0.11413712334749294 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.34947561143636463 0.0 2 0.0 0.0 0.0 1.7641921193424768 0.0 3 0.0 0.0 0.0 2.5512420220777976 0.0 4 0.0 0.0 0.0 3.514197373736902 0.0 5 0.0 0.0 0.0 6.070109968637103 0.0 6 0.0 0.0 0.0 7.358662628178033 0.0 7 0.0 0.0 0.0 8.73175265580447 0.0 8 0.0 0.0 0.0 10.798597894038714 0.0 9 0.0 0.0 0.0 11.50578100151093 0.0 10 0.0 0.0 0.0 13.304301831098075 0.0 11 0.0 0.0 0.0 16.107638021265117 0.0 12 5.8382160280047546E-5 0.0 0.0 18.263866346888115 0.0 13 5.8382160280047546E-5 0.0 0.0 19.063059738961684 0.0 14 5.8382160280047546E-5 0.0 0.0 19.359816259665166 0.0 15 5.8382160280047546E-5 0.0 0.0 19.922795431245664 0.0 16 5.8382160280047546E-5 0.0 0.0 21.061305938866873 0.0 17 5.8382160280047546E-5 0.0 0.0 22.527807422941386 0.0 18 5.8382160280047546E-5 0.0 0.0 24.0897053569135 0.0 19 5.8382160280047546E-5 0.0 0.0 25.076130337005182 0.0 20 5.8382160280047546E-5 0.0 0.0 26.02028663305411 0.0 21 5.8382160280047546E-5 0.0 0.0 27.13742927001282 0.0 22 1.1676432056009509E-4 0.0 0.0 28.384647360075476 0.0 23 1.1676432056009509E-4 0.0 0.0 29.570622564004363 0.0 24 1.1676432056009509E-4 0.0 0.0 30.46381123412881 0.0 25 1.7514648084014265E-4 0.0 0.0 31.26055257547062 0.0 26 1.7514648084014265E-4 0.0 0.0 32.01660155109723 0.0 27 1.7514648084014265E-4 0.0 0.0 32.76471055292576 0.0 28 1.7514648084014265E-4 0.0 0.0 33.50779868897021 0.0 29 1.7514648084014265E-4 0.0 0.0 34.312188093308706 0.0 30 1.7514648084014265E-4 0.0 0.0 35.19831252203927 0.0 31 1.7514648084014265E-4 0.0 0.0 35.99114225864231 0.0 32 2.3352864112019018E-4 0.0 0.0 36.71473075315322 0.0 33 2.3352864112019018E-4 0.0 0.0 37.41543344083435 0.0 34 2.3352864112019018E-4 0.0 0.0 38.13224960475277 0.0 35 2.3352864112019018E-4 0.0 0.0 38.89139283487423 0.0 36 2.3352864112019018E-4 0.0 0.0 39.6616286754489 0.0 37 2.3352864112019018E-4 0.0 0.0 40.37564249567388 0.0 38 2.3352864112019018E-4 0.0 0.0 41.12153297541177 0.0 39 2.3352864112019018E-4 0.0 0.0 41.95651463173701 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGAATA 30 2.1661272E-6 45.000004 37 TCGTTAA 20 7.0342555E-4 45.000004 27 GATCGGT 20 7.0342555E-4 45.000004 25 ACGTTCA 20 7.0342555E-4 45.000004 11 TTTCGTA 20 7.0342555E-4 45.000004 12 CGCATGA 20 7.0342555E-4 45.000004 43 GAATCGT 20 7.0342555E-4 45.000004 8 TATATCG 30 2.1661272E-6 45.000004 40 ATATCGC 30 2.1661272E-6 45.000004 41 CCGTAGA 20 7.0342555E-4 45.000004 21 AACGCTC 20 7.0342555E-4 45.000004 22 ACTAACG 20 7.0342555E-4 45.000004 40 CGTACCA 20 7.0342555E-4 45.000004 22 ACGTCGA 20 7.0342555E-4 45.000004 29 CGTCGGT 20 7.0342555E-4 45.000004 25 TCGAGTA 30 2.1661272E-6 45.000004 38 ACGTAAT 20 7.0342555E-4 45.000004 42 CGACTAA 20 7.0342555E-4 45.000004 29 TCGAACG 30 2.1661272E-6 45.000004 1 AATCGTC 20 7.0342555E-4 45.000004 36 >>END_MODULE