SRR2935035.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2935035.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4739398
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	59036	1.245643434039513	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGTCTT	32625	0.6883785662229676	No Hit
CGTTCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGTCTTC	23233	0.4902099380554239	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGTCT	18680	0.39414288481364085	No Hit
CGCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGTCTTCTG	14855	0.3134364322219826	No Hit
CGTCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGTCTTCT	8425	0.1777651929633257	No Hit
CGTTTTTCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGTC	8418	0.17761749488015144	No Hit
CCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGTCTTCTGC	6136	0.12946791976533728	No Hit
CGTTTTTTCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGT	6111	0.12894042661114344	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCC	6052	0.12769554276724598	No Hit
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG	5847	0.12337009890285644	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	35330	43.860035	1
CGTTTCT	3945	39.23954	1
CGTTCTG	2990	39.20569	1
TAATGCG	140	38.571426	1
GTTTTTT	40530	38.15507	2
TATACGG	375	36.0	2
TAATACG	120	35.625	1
CGTAAGG	670	35.59701	2
CGTTTTC	2405	35.457382	1
TTGTACG	240	34.6875	1
CGGTCTA	280	34.55357	31
TACGGGA	1285	34.319065	4
GCGTAAG	420	34.285713	1
TACGAAT	430	34.011627	12
TAAGGGA	3145	33.767887	4
GACCGAT	1890	33.69048	9
TTATGCG	195	33.461536	1
CTATGCG	190	33.157894	1
ACGGGAG	2385	33.11321	5
TTACGGG	1110	33.04054	3