##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935035.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4739398 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.47556525111417 33.0 31.0 34.0 31.0 34.0 2 32.693258299893785 34.0 31.0 34.0 31.0 34.0 3 32.598507236573084 34.0 31.0 34.0 31.0 34.0 4 36.14251409145212 37.0 35.0 37.0 35.0 37.0 5 36.081619015748416 37.0 35.0 37.0 35.0 37.0 6 36.03486835247852 37.0 35.0 37.0 35.0 37.0 7 36.23886134905741 37.0 37.0 37.0 35.0 37.0 8 36.050901612398874 37.0 37.0 37.0 35.0 37.0 9 37.80792117479899 39.0 38.0 39.0 35.0 39.0 10 37.68237527213372 39.0 37.0 39.0 35.0 39.0 11 37.57503294722241 39.0 37.0 39.0 35.0 39.0 12 37.32822206533404 39.0 37.0 39.0 35.0 39.0 13 37.2375421941774 39.0 37.0 39.0 34.0 39.0 14 38.26148342046817 40.0 38.0 41.0 33.0 41.0 15 38.372996739248315 40.0 38.0 41.0 33.0 41.0 16 38.47009198214626 40.0 38.0 41.0 34.0 41.0 17 38.50234206960462 40.0 38.0 41.0 34.0 41.0 18 38.379516765631415 40.0 37.0 41.0 34.0 41.0 19 38.23940213503909 40.0 37.0 41.0 34.0 41.0 20 38.08259825403986 40.0 35.0 41.0 34.0 41.0 21 38.0179385651933 40.0 35.0 41.0 34.0 41.0 22 38.00976643025127 40.0 35.0 41.0 34.0 41.0 23 37.84771082740888 40.0 35.0 41.0 34.0 41.0 24 37.65835323389173 40.0 35.0 41.0 33.0 41.0 25 37.60163632596376 39.0 35.0 41.0 33.0 41.0 26 37.71895650038254 40.0 35.0 41.0 34.0 41.0 27 37.75134415805552 40.0 35.0 41.0 34.0 41.0 28 37.68590504532432 40.0 35.0 41.0 34.0 41.0 29 37.65964263815784 40.0 35.0 41.0 34.0 41.0 30 37.52287716710013 40.0 35.0 41.0 33.0 41.0 31 37.31719788040591 40.0 35.0 41.0 33.0 41.0 32 37.086064517054695 39.0 35.0 41.0 33.0 41.0 33 36.788266568876466 39.0 35.0 41.0 32.0 41.0 34 36.4336348202873 39.0 35.0 41.0 31.0 41.0 35 36.234737829572445 39.0 35.0 41.0 30.0 41.0 36 36.111971815829776 39.0 35.0 41.0 30.0 41.0 37 36.04341521855729 39.0 35.0 41.0 30.0 41.0 38 35.95134192148454 39.0 35.0 41.0 29.0 41.0 39 35.838318073308045 39.0 35.0 41.0 29.0 41.0 40 35.7552132148429 39.0 35.0 41.0 29.0 41.0 41 35.62855767757846 39.0 35.0 41.0 27.0 41.0 42 35.590646533589286 38.0 35.0 41.0 28.0 41.0 43 35.53459046908489 38.0 35.0 41.0 27.0 41.0 44 35.409361062312136 38.0 35.0 41.0 27.0 41.0 45 35.369933692000544 38.0 35.0 41.0 27.0 41.0 46 35.297903868803594 38.0 35.0 40.0 27.0 41.0 47 35.234145982253445 38.0 35.0 40.0 27.0 41.0 48 35.11303271006149 37.0 35.0 40.0 26.0 41.0 49 35.04016480574115 37.0 35.0 40.0 26.0 41.0 50 34.96399226230842 37.0 34.0 40.0 26.0 41.0 51 33.95815375708054 36.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 42.0 9 71.0 10 93.0 11 82.0 12 62.0 13 111.0 14 151.0 15 236.0 16 421.0 17 771.0 18 1403.0 19 2398.0 20 4087.0 21 6439.0 22 9780.0 23 14934.0 24 24280.0 25 42216.0 26 64214.0 27 75441.0 28 75514.0 29 73240.0 30 77043.0 31 87777.0 32 110700.0 33 164867.0 34 340241.0 35 352568.0 36 331300.0 37 502316.0 38 889953.0 39 1485336.0 40 1308.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.659951327151674 20.729742469402233 23.785257114933163 18.82504908851293 2 37.812734866326906 22.455721169650662 23.53879121356763 16.192752750454805 3 29.17406387899898 21.927362926683937 32.80773212125253 16.090841073064553 4 26.06611641394118 23.93257540303642 32.39943132018033 17.601876862842076 5 24.404344180421226 27.338324403225894 30.42650142486451 17.83082999148837 6 25.99558002936238 30.53978585465918 28.329336341872956 15.135297774105489 7 76.2852370701933 4.970272595802252 13.611939744246 5.132550589758446 8 79.01488754478945 3.3356768095863654 13.312028236497547 4.337407409126644 9 73.14101917585315 5.4912670343364285 15.26012375411392 6.107590035696517 10 42.78750170380289 22.54396022448421 20.906030681533817 13.76250739017909 11 31.658303438537978 20.695434314653465 28.863940103785335 18.78232214302323 12 27.994821283209387 19.30126990811913 32.65157304788499 20.052335760786498 13 25.939602455839328 19.053685721266707 34.87999952736614 20.12671229552783 14 20.346930137540674 21.3935187549136 37.24156527896581 21.017985828579917 15 19.737253549923427 21.907022790658225 37.76361470380837 20.592108955609977 16 25.62734760828274 22.800342997148583 32.84874998892264 18.723559405646036 17 25.641463325088964 23.202651475989143 30.80581120218222 20.35007399673967 18 25.646337361833716 22.66258288499932 31.9285276315684 19.762552121598567 19 24.587363205200322 25.43156324917215 29.70788695104315 20.273186594584374 20 24.225798297589694 26.90145457292255 29.463615421199062 19.40913170828869 21 23.8784757051423 25.298339578148955 32.13471415567969 18.688470561029057 22 23.448463285843477 22.250505232943087 33.030925024655026 21.27010645655841 23 21.860286897196648 23.086138788090807 33.65499162551868 21.39858268919386 24 22.80272726620554 23.121290931886286 32.38691918256285 21.689062619345325 25 24.962305339201308 23.96441488982356 29.46439611106727 21.608883659907864 26 22.371702060050662 23.628633847589924 29.923420653846755 24.076243438512655 27 21.81990202131157 22.676424305365366 31.999106215599532 23.50456745772353 28 21.421644689895214 23.766478358643862 30.13870115993635 24.673175791524578 29 23.079133679003114 24.37066901745749 29.743207892647973 22.806989410891426 30 25.357883005394356 22.20461332852822 31.057045641661663 21.38045802441576 31 25.51967570564869 23.056134977480262 30.525564639222114 20.898624677648932 32 27.301188885170646 22.752298920664607 28.979440004827616 20.967072189337127 33 27.518790361138695 23.114243623346255 29.016195727811844 20.350770287703206 34 23.767491145499914 24.058414169900903 31.59156500466937 20.582529679929813 35 24.25911476520858 25.925634437116273 29.353580349234225 20.46167044844092 36 25.83306993841834 27.110236363352474 26.955723068626014 20.100970629603168 37 24.59331332797963 28.269202122294857 26.67117216152769 20.466312388197828 38 24.99741528354445 26.184886772539468 27.88799336962205 20.929704574294032 39 24.210754192832084 24.729174464773795 27.572193768069276 23.487877574324838 40 26.014780780175034 23.319417360601495 28.812245774674338 21.853556084549133 41 22.983699617546364 24.670897021098458 28.58702729755973 23.758376063795446 42 22.045647991580367 24.891304760646815 30.088652609466433 22.974394638306382 43 22.58103244336095 23.674378053921615 30.671279348136622 23.073310154580813 44 23.794266698006794 23.185666196424105 29.264307407818464 23.75575969775064 45 22.617788166345175 23.193641892915515 28.42780876389786 25.760761176841445 46 22.723603293076465 23.388561163253225 28.960323652919634 24.92751189075068 47 22.28683896140396 24.268461943900892 30.58162661164983 22.863072483045315 48 21.88326449899333 24.27525605572691 30.503578724555314 23.33790072072445 49 23.37630222234976 22.871322475976907 30.339992547576717 23.412382754096615 50 21.020053601744358 23.57326816612574 31.24270213221173 24.163976099918173 51 20.90685357085436 23.184526811211047 30.600025572868116 25.308594045066485 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2388.0 1 3368.5 2 4349.0 3 53461.0 4 102573.0 5 67517.0 6 32461.0 7 31797.5 8 31134.0 9 30931.5 10 30729.0 11 30039.0 12 29349.0 13 27961.0 14 26573.0 15 25108.5 16 23644.0 17 21886.5 18 20129.0 19 20048.0 20 19967.0 21 19778.5 22 19590.0 23 20337.0 24 21084.0 25 23250.0 26 30687.0 27 35958.0 28 40422.5 29 44887.0 30 51859.0 31 58831.0 32 66344.5 33 73858.0 34 86887.5 35 99917.0 36 111096.0 37 122275.0 38 128826.0 39 135377.0 40 148256.0 41 161135.0 42 174905.0 43 188675.0 44 209641.0 45 230607.0 46 288870.0 47 347133.0 48 372777.5 49 398422.0 50 404643.5 51 410865.0 52 371409.0 53 331953.0 54 313053.0 55 294153.0 56 285640.5 57 277128.0 58 267005.5 59 256883.0 60 242698.5 61 228514.0 62 211219.5 63 193925.0 64 172927.5 65 151930.0 66 129754.5 67 107579.0 68 91490.5 69 75402.0 70 62604.5 71 49807.0 72 40636.5 73 31466.0 74 25370.5 75 15773.0 76 12271.0 77 9327.0 78 6383.0 79 4682.5 80 2982.0 81 2091.0 82 1200.0 83 932.5 84 665.0 85 432.5 86 200.0 87 213.5 88 227.0 89 157.0 90 87.0 91 55.5 92 24.0 93 19.0 94 14.0 95 8.0 96 2.0 97 1.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4739398.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.796532623946778 #Duplication Level Percentage of deduplicated Percentage of total 1 73.40539924742893 15.999831794704228 2 9.774564328020993 4.26103220521152 3 3.624386725890943 2.3699719053804476 4 1.892863816731023 1.6503147173626462 5 1.1621517788149125 1.266543958045851 6 0.8470664418070272 1.1077866800098428 7 0.6349287675803141 0.9687471917512646 8 0.48901869280239063 0.8527129513109691 9 0.42617421919632453 0.836020824497796 >10 5.5946365486899285 30.54278652276202 >50 1.962752030853449 29.25628043779625 >100 0.1787755457828001 5.395106111265357 >500 0.0045265593861926745 0.6820851263856662 >1k 0.0016728589018575914 0.7480393965328747 >5k 5.904207888909146E-4 0.8791543417962495 >10k+ 4.920173240757622E-4 3.1835858351868924 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 59036 1.245643434039513 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGTCTT 32625 0.6883785662229676 No Hit CGTTCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGTCTTC 23233 0.4902099380554239 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGTCT 18680 0.39414288481364085 No Hit CGCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGTCTTCTG 14855 0.3134364322219826 No Hit CGTCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGTCTTCT 8425 0.1777651929633257 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGTC 8418 0.17761749488015144 No Hit CCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGTCTTCTGC 6136 0.12946791976533728 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCCGT 6111 0.12894042661114344 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGAGTCGATCGTATGCC 6052 0.12769554276724598 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 5847 0.12337009890285644 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.4769808317427656E-4 0.0 0.0 0.09591935515860875 0.0 2 1.4769808317427656E-4 0.0 0.0 0.3408449765138948 0.0 3 1.4769808317427656E-4 0.0 0.0 0.8092166979856935 0.0 4 1.4769808317427656E-4 0.0 0.0 1.1975360583770345 0.0 5 1.4769808317427656E-4 0.0 0.0 2.344664870939305 0.0 6 1.4769808317427656E-4 0.0 0.0 3.982721012246703 0.0 7 1.4769808317427656E-4 0.0 0.0 5.239842697321474 0.0 8 1.4769808317427656E-4 0.0 0.0 6.5749700700384315 0.0 9 1.4769808317427656E-4 0.0 0.0 7.582988387976701 0.0 10 1.8989753550978416E-4 0.0 0.0 8.695745746611701 0.0 11 1.8989753550978416E-4 0.0 0.0 9.80088610410014 0.0 12 1.8989753550978416E-4 0.0 0.0 10.493780011723008 0.0 13 1.8989753550978416E-4 0.0 0.0 10.843507972953526 0.0 14 1.8989753550978416E-4 0.0 0.0 11.121011571511826 0.0 15 2.1099726167753794E-4 0.0 0.0 11.336566374041597 0.0 16 2.1099726167753794E-4 0.0 0.0 11.618163319476439 0.0 17 2.1099726167753794E-4 0.0 0.0 11.92955307826015 0.0 18 2.1099726167753794E-4 0.0 0.0 12.283184488831704 0.0 19 2.1099726167753794E-4 0.0 0.0 12.540369051090455 0.0 20 2.1099726167753794E-4 0.0 0.0 12.818885436504805 0.0 21 2.3209698784529175E-4 0.0 0.0 13.14217544084713 0.0 22 2.5319671401304554E-4 0.0 0.0 13.509416174796883 0.0 23 2.5319671401304554E-4 0.0 0.0 13.85268761982007 0.0 24 2.5319671401304554E-4 0.0 0.0 14.143673943399563 0.0 25 2.5319671401304554E-4 0.0 0.0 14.408074612007685 0.0 26 2.5319671401304554E-4 0.0 0.0 14.674648552411087 0.0 27 2.5319671401304554E-4 2.1099726167753796E-5 0.0 14.992072832878774 0.0 28 2.953961663485531E-4 2.1099726167753796E-5 0.0 15.271791902684686 0.0 29 2.953961663485531E-4 2.1099726167753796E-5 0.0 15.58419444832445 0.0 30 2.953961663485531E-4 2.1099726167753796E-5 0.0 15.972935803239146 0.0 31 3.164958925163069E-4 2.1099726167753796E-5 0.0 16.272045521393224 0.0 32 3.164958925163069E-4 2.1099726167753796E-5 0.0 16.589933995836603 0.0 33 3.164958925163069E-4 2.1099726167753796E-5 0.0 16.890963789071947 0.0 34 3.164958925163069E-4 2.1099726167753796E-5 0.0 17.20304983881919 0.0 35 3.164958925163069E-4 2.1099726167753796E-5 0.0 17.55957191187573 0.0 36 3.164958925163069E-4 2.1099726167753796E-5 0.0 17.895542851644873 0.0 37 3.164958925163069E-4 2.1099726167753796E-5 0.0 18.283102621894173 0.0 38 3.164958925163069E-4 2.1099726167753796E-5 0.0 18.790740933764162 0.0 39 3.164958925163069E-4 2.1099726167753796E-5 0.0 19.6403003081826 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 35330 0.0 43.860035 1 CGTTTCT 3945 0.0 39.23954 1 CGTTCTG 2990 0.0 39.20569 1 TAATGCG 140 0.0 38.571426 1 GTTTTTT 40530 0.0 38.15507 2 TATACGG 375 0.0 36.0 2 TAATACG 120 0.0 35.625 1 CGTAAGG 670 0.0 35.59701 2 CGTTTTC 2405 0.0 35.457382 1 TTGTACG 240 0.0 34.6875 1 CGGTCTA 280 0.0 34.55357 31 TACGGGA 1285 0.0 34.319065 4 GCGTAAG 420 0.0 34.285713 1 TACGAAT 430 0.0 34.011627 12 TAAGGGA 3145 0.0 33.767887 4 GACCGAT 1890 0.0 33.69048 9 TTATGCG 195 0.0 33.461536 1 CTATGCG 190 0.0 33.157894 1 ACGGGAG 2385 0.0 33.11321 5 TTACGGG 1110 0.0 33.04054 3 >>END_MODULE